Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(15,998)		   Primates
(45)		   Rodents
(5,211)		   Mammals
(794)		   Vertebrates
(412)		   Invertebrates
(1,585)		   Plants
(2,134)		   Bacteria
(1,024)		   Viruses
(23)		   Phages
(0)		   Unclassified
(338)		   All
(27,761)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(105)		   Tiling Array
(0)		   cDNA Array
(24)		   Oligo Array
(274)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(9)		   Other
(0)		   All
(412)		  
  brain
(26)		   blood
(20)		   connective
(46)		   reproductive
(36)		   muscular
(0)		   digestive
(21)		   liver
(29)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(17)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(109)		   unclassified
(108)		   all
(412)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM371824 D.rerio_adult_pooled infected fish_1,2,3 and 4 (s7) 1,156,021 University of Leiden 2009-02-17 [HT Sequencing] Illumina Genome Analyzer II (Danio rerio) (GPL9319) SRA Danio rerio
Danio rerio		 unclassified source_name:pooled whole adult fish (M.marinum-infected) title:D.rerio_adult_pooled infected fish_1,2,3 and 4 (s7) description:s_7
2 GSM371822 D.rerio_adult_pooled infected fish_1,2,3 and 4 (s3) 879,888 University of Leiden 2009-02-17 [HT Sequencing] Illumina Genome Analyzer II (Danio rerio) (GPL9319) SRA Danio rerio
Danio rerio		 unclassified source_name:pooled whole adult fish (M.marinum-infected) title:D.rerio_adult_pooled infected fish_1,2,3 and 4 (s3) description:s_3
3 GSM371821 D.rerio_adult_pooled control fish 1,2,3 and 4 (s2) 803,866 University of Leiden 2009-02-17 [HT Sequencing] Illumina Genome Analyzer II (Danio rerio) (GPL9319) SRA Danio rerio
Danio rerio		 unclassified source_name:pooled whole adult fish (healthy control) title:D.rerio_adult_pooled control fish 1,2,3 and 4 (s2) description:s_2
4 GSM371823 D.rerio_adult_pooled control fish 1,2,3 and 4 (s6) 785,940 University of Leiden 2009-02-17 [HT Sequencing] Illumina Genome Analyzer II (Danio rerio) (GPL9319) SRA Danio rerio
Danio rerio		 unclassified source_name:pooled whole adult fish (healthy control) title:D.rerio_adult_pooled control fish 1,2,3 and 4 (s6) description:s_6
5 GSM372603 oocytes stage III, IV 566,626 Cambridge University 2009-02-20 [HT Sequencing] Illumina Genome Analyzer II (Xenopus (Silurana) tropicalis) (GPL9320) SRA Xenopus (Silurana) tropicalis
Xenopus tropicalis		 ovary Xenopus tropicalis oocytes stage III, IV
6 GSM372602 oocytes stage I, II 549,672 Cambridge University 2009-02-20 [HT Sequencing] Illumina Genome Analyzer II (Xenopus (Silurana) tropicalis) (GPL9320) SRA Xenopus (Silurana) tropicalis
Xenopus tropicalis		 ovary Xenopus tropicalis oocytes stage I, II
7 GSM372604 oocytes stage V, VI 385,001 Cambridge University 2009-02-20 [HT Sequencing] Illumina Genome Analyzer II (Xenopus (Silurana) tropicalis) (GPL9320) SRA Xenopus (Silurana) tropicalis
Xenopus tropicalis		 ovary Xenopus tropicalis oocytes stage V, VI
8 GSM373505 Zoarces viviparus evaluation data 124,992 University of Gothenburg 2009-02-23 [Oligo Array] Zoarces viviparus validation microarray (GPL8222) RNA Zoarces viviparus
Zoarces viviparus		 unclassified source_name:mRNA pool from 31 Z. viviparus title:Zoarces viviparus evaluation data description:Full details can be found in Kristiansson et al 2009.
9 GSM372601 adult skin 87,960 Cambridge University 2009-02-20 [HT Sequencing] Illumina Genome Analyzer II (Xenopus (Silurana) tropicalis) (GPL9320) SRA Xenopus (Silurana) tropicalis
Xenopus tropicalis		 skin Xenopus tropicalis adult skin
10 GSM372598 adult liver 87,720 Cambridge University 2009-02-20 [HT Sequencing] Illumina Genome Analyzer II (Xenopus (Silurana) tropicalis) (GPL9320) SRA Xenopus (Silurana) tropicalis
Xenopus tropicalis		 liver/hepato Xenopus tropicalis adult liver
11 GSM375477 product 1 after 1 day (I 1-1) 55,316 Institute of Microbiology 2009-02-26 [Oligo Array] Gallus gallus 55k 080317_Chicken_galGal3_expr (GPL8231) RNA Gallus gallus
Gallus gallus		 intestine Ileum of chickens which inoculated product1 after 1 day
12 GSM375478 product 2 after 1 day (I 1-2) 55,316 Institute of Microbiology 2009-02-26 [Oligo Array] Gallus gallus 55k 080317_Chicken_galGal3_expr (GPL8231) RNA Gallus gallus
Gallus gallus		 intestine Ileum of chickens which inoculated product 2 after 1 day
13 GSM375479 water after 1 day (I 1-3) 55,316 Institute of Microbiology 2009-02-26 [Oligo Array] Gallus gallus 55k 080317_Chicken_galGal3_expr (GPL8231) RNA Gallus gallus
Gallus gallus		 intestine Ileum of chickens which inoculated wate after 1 day
14 GSM375480 product 1 after 7 days (I 7-1) 55,316 Institute of Microbiology 2009-02-26 [Oligo Array] Gallus gallus 55k 080317_Chicken_galGal3_expr (GPL8231) RNA Gallus gallus
Gallus gallus		 intestine Ileum of chickens which inoculated product1 after 7 day
15 GSM375481 product 2 after 7 days (I 7-2) 55,316 Institute of Microbiology 2009-02-26 [Oligo Array] Gallus gallus 55k 080317_Chicken_galGal3_expr (GPL8231) RNA Gallus gallus
Gallus gallus		 intestine Ileum of chickens which inoculated product 2 after 7 day
16 GSM375482 water after 7 days (I 7-3) 55,316 Institute of Microbiology 2009-02-26 [Oligo Array] Gallus gallus 55k 080317_Chicken_galGal3_expr (GPL8231) RNA Gallus gallus
Gallus gallus		 intestine Ileum of chickens which inoculated wate after 7 day
17 GSM375483 product 1 after 15 days (I 15-1) 55,316 Institute of Microbiology 2009-02-26 [Oligo Array] Gallus gallus 55k 080317_Chicken_galGal3_expr (GPL8231) RNA Gallus gallus
Gallus gallus		 intestine Ileum of chickens which inoculated product1 after 15 day
18 GSM375484 product 2 after 15 days (I 15-2) 55,316 Institute of Microbiology 2009-02-26 [Oligo Array] Gallus gallus 55k 080317_Chicken_galGal3_expr (GPL8231) RNA Gallus gallus
Gallus gallus		 intestine Ileum of chickens which inoculated product 2 after 15 day
19 GSM375485 water after 15 days (I 15-3) 55,316 Institute of Microbiology 2009-02-26 [Oligo Array] Gallus gallus 55k 080317_Chicken_galGal3_expr (GPL8231) RNA Gallus gallus
Gallus gallus		 intestine Ileum of chickens which inoculated water after 15 day
20 GSM375486 product 1 after 7 days (repeat I 7-1) 55,316 Institute of Microbiology 2009-02-26 [Oligo Array] Gallus gallus 55k 080317_Chicken_galGal3_expr (GPL8231) RNA Gallus gallus
Gallus gallus		 intestine Ileum of chickens which inoculated product1 after 7 day
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