Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,432)
  Primates
(665)
  Rodents
(7,826)
  Mammals
(399)
  Vertebrates
(731)
  Invertebrates
(1,567)
  Plants
(3,435)
  Bacteria
(998)
  Viruses
(14)
  Phages
(0)
  Unclassified
(76)
  All
(33,163)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(92)
  Tiling Array
(0)
  cDNA Array
(337)
  Oligo Array
(289)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(13)
  Other
(0)
  All
(731)
 
  brain
(38)
  blood
(14)
  connective
(12)
  reproductive
(216)
  muscular
(12)
  digestive
(12)
  liver
(105)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(25)
  embryo
(66)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(231)
  all
(731)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM389473 X.tropicalis Xiwi IP Small RNAs 345,510 Brandeis University 2009-04-05 [HT Sequencing] Illumina Genome Analyzer II (Xenopus (Silurana) tropicalis) (GPL9320) SRA Xenopus (Silurana) tropicalis
Xenopus tropicalis
ovary Immunoprecipitation of Xiwi from X.tropicalis Egg Extract
2 GSM422365 Early_Skin_1_infected 113,986 University of Idaho 2009-06-26 [Oligo Array] Custom NimbleGen Xenopus tropicalis Oligo Expression Array (GPL8767) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
skin Early Skin Infected
3 GSM422366 Early_Skin_1_control 113,986 University of Idaho 2009-06-26 [Oligo Array] Custom NimbleGen Xenopus tropicalis Oligo Expression Array (GPL8767) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
skin Early Skin Control
4 GSM422367 Early_Skin_2_control 113,986 University of Idaho 2009-06-26 [Oligo Array] Custom NimbleGen Xenopus tropicalis Oligo Expression Array (GPL8767) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
skin Early Skin Control
5 GSM422368 Early_Skin_2_infected 113,986 University of Idaho 2009-06-26 [Oligo Array] Custom NimbleGen Xenopus tropicalis Oligo Expression Array (GPL8767) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
skin Early Skin Infected
6 GSM422369 Early_Skin_3_infected 113,986 University of Idaho 2009-06-26 [Oligo Array] Custom NimbleGen Xenopus tropicalis Oligo Expression Array (GPL8767) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
skin Early Skin Infected
7 GSM422370 Early_Skin_3_control 113,986 University of Idaho 2009-06-26 [Oligo Array] Custom NimbleGen Xenopus tropicalis Oligo Expression Array (GPL8767) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
skin Early Skin Control
8 GSM422371 Late_Skin_1_control 113,986 University of Idaho 2009-06-26 [Oligo Array] Custom NimbleGen Xenopus tropicalis Oligo Expression Array (GPL8767) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
skin Late Skin Control
9 GSM422372 Late_Skin_1_infected 113,986 University of Idaho 2009-06-26 [Oligo Array] Custom NimbleGen Xenopus tropicalis Oligo Expression Array (GPL8767) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
skin Late Skin Infected
10 GSM422373 Late_Skin_2_infected 113,986 University of Idaho 2009-06-26 [Oligo Array] Custom NimbleGen Xenopus tropicalis Oligo Expression Array (GPL8767) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
skin Late Skin Infected
11 GSM422374 Late_Skin_2_control 113,986 University of Idaho 2009-06-26 [Oligo Array] Custom NimbleGen Xenopus tropicalis Oligo Expression Array (GPL8767) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
skin Late Skin Control
12 GSM422375 Late_Skin_3_control 113,986 University of Idaho 2009-06-26 [Oligo Array] Custom NimbleGen Xenopus tropicalis Oligo Expression Array (GPL8767) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
skin Late Skin Control
13 GSM422376 Late_Skin_3_infected 113,986 University of Idaho 2009-06-26 [Oligo Array] Custom NimbleGen Xenopus tropicalis Oligo Expression Array (GPL8767) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
skin Late Skin Infected
14 GSM422377 Early_Liver_1_infected 113,986 University of Idaho 2009-06-26 [Oligo Array] Custom NimbleGen Xenopus tropicalis Oligo Expression Array (GPL8767) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
liver/hepato Early Liver Infected
15 GSM422378 Early_Liver_1_control 113,986 University of Idaho 2009-06-26 [Oligo Array] Custom NimbleGen Xenopus tropicalis Oligo Expression Array (GPL8767) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
liver/hepato Early Liver Control
16 GSM422379 Early_Liver_2_infected 113,986 University of Idaho 2009-06-26 [Oligo Array] Custom NimbleGen Xenopus tropicalis Oligo Expression Array (GPL8767) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
liver/hepato Early Liver Infected
17 GSM422380 Early_Liver_2_control 113,986 University of Idaho 2009-06-26 [Oligo Array] Custom NimbleGen Xenopus tropicalis Oligo Expression Array (GPL8767) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
liver/hepato Early Liver Control
18 GSM422381 Early_Liver_3_control 113,986 University of Idaho 2009-06-26 [Oligo Array] Custom NimbleGen Xenopus tropicalis Oligo Expression Array (GPL8767) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
liver/hepato Early Liver Control
19 GSM422382 Early_Liver_3_infected 113,986 University of Idaho 2009-06-26 [Oligo Array] Custom NimbleGen Xenopus tropicalis Oligo Expression Array (GPL8767) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
liver/hepato Early Liver Infected
20 GSM422383 Late_Liver_1_control 113,986 University of Idaho 2009-06-26 [Oligo Array] Custom NimbleGen Xenopus tropicalis Oligo Expression Array (GPL8767) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
liver/hepato Late Liver Control
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