Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(19,965)
  Primates
(102)
  Rodents
(7,643)
  Mammals
(1,266)
  Vertebrates
(768)
  Invertebrates
(2,167)
  Plants
(5,402)
  Bacteria
(1,730)
  Viruses
(10)
  Phages
(0)
  Unclassified
(333)
  All
(39,502)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(175)
  Tiling Array
(0)
  cDNA Array
(132)
  Oligo Array
(446)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(15)
  Other
(0)
  All
(768)
 
  brain
(32)
  blood
(78)
  connective
(17)
  reproductive
(21)
  muscular
(24)
  digestive
(16)
  liver
(66)
  lung
(52)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(189)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(44)
  unclassified
(229)
  all
(768)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM606866 egg_0min_mixed_rep1 45,220 Ruder Boskovic Institute 2010-10-11 [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) RNA Danio rerio
Danio rerio
ovary unfertilised egg, 0min, mixed sex, replicate 1
2 GSM606867 egg_0min_mixed_rep2 45,220 Ruder Boskovic Institute 2010-10-11 [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) RNA Danio rerio
Danio rerio
ovary unfertilised egg, 0min, mixed sex, replicate 2
3 GSM606868 zygote_15min_mixed_rep1 45,220 Ruder Boskovic Institute 2010-10-11 [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) RNA Danio rerio
Danio rerio
unclassified source_name:zygote, 15min, mixed sex, replicate 1 title:zygote_15min_mixed_rep1 description:Agilent Feature Extraction file: US84303580_251916110410_S01_GE1_105_Dec08_1_1.txt. Gene expression in wild type zebrafish zygote, 15min, mixed sex, biological replicate 1.
4 GSM606869 zygote_15min_mixed_rep2 45,220 Ruder Boskovic Institute 2010-10-11 [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) RNA Danio rerio
Danio rerio
unclassified source_name:zygote, 15min, mixed sex, replicate 2 title:zygote_15min_mixed_rep2 description:Agilent Feature Extraction file: US84303580_251916110393_S01_GE1_105_Dec08_1_1.txt. Gene expression in wild type zebrafish zygote, 15min, mixed sex, biological replicate 2.
5 GSM606870 cleavage_45min_mixed_rep1 45,220 Ruder Boskovic Institute 2010-10-11 [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) RNA Danio rerio
Danio rerio
unclassified source_name:cleavage, 45min, mixed sex, replicate 1 title:cleavage_45min_mixed_rep1 description:Agilent Feature Extraction file: US84303580_251916110410_S01_GE1_105_Dec08_1_2.txt. Gene expression in wild type zebrafish cleavage, 45min, mixed sex, biological replicate 1.
6 GSM606871 cleavage_45min_mixed_rep2 45,220 Ruder Boskovic Institute 2010-10-11 [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) RNA Danio rerio
Danio rerio
unclassified source_name:cleavage, 45min, mixed sex, replicate 2 title:cleavage_45min_mixed_rep2 description:Agilent Feature Extraction file: US84303580_251916110393_S01_GE1_105_Dec08_1_2.txt. Gene expression in wild type zebrafish cleavage, 45min, mixed sex, biological replicate 2.
7 GSM606872 cleavage_1h15min_mixed_rep1 45,220 Ruder Boskovic Institute 2010-10-11 [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) RNA Danio rerio
Danio rerio
unclassified source_name:cleavage, 1h15min, mixed sex, replicate 1 title:cleavage_1h15min_mixed_rep1 description:Agilent Feature Extraction file: US84303580_251916110410_S01_GE1_105_Dec08_1_3.txt. Gene expression in wild type zebrafish cleavage, 1h15min, mixed sex, biological replicate 1.
8 GSM606873 cleavage_1h15min_mixed_rep2 45,220 Ruder Boskovic Institute 2010-10-11 [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) RNA Danio rerio
Danio rerio
unclassified source_name:cleavage, 1h15min, mixed sex, replicate 2 title:cleavage_1h15min_mixed_rep2 description:Agilent Feature Extraction file: US84303580_251916110393_S01_GE1_105_Dec08_1_3.txt. Gene expression in wild type zebrafish cleavage, 1h15min, mixed sex, biological replicate 2.
9 GSM606874 cleavage_1h45min_mixed_rep1 45,220 Ruder Boskovic Institute 2010-10-11 [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) RNA Danio rerio
Danio rerio
unclassified source_name:cleavage, 1h45min, mixed sex, replicate 1 title:cleavage_1h45min_mixed_rep1 description:Agilent Feature Extraction file: US84303580_251916110410_S01_GE1_105_Dec08_1_4.txt. Gene expression in wild type zebrafish cleavage, 1h45min, mixed sex, biological replicate 1.
10 GSM606875 cleavage_1h45min_mixed_rep2 45,220 Ruder Boskovic Institute 2010-10-11 [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) RNA Danio rerio
Danio rerio
unclassified source_name:cleavage, 1h45min, mixed sex, replicate 2 title:cleavage_1h45min_mixed_rep2 description:Agilent Feature Extraction file: US84303580_251916110393_S01_GE1_105_Dec08_1_4.txt. Gene expression in wild type zebrafish cleavage, 1h45min, mixed sex, biological replicate 2.
11 GSM606876 cleavage_1h45min_mixed_rep3 45,220 Ruder Boskovic Institute 2010-10-11 [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) RNA Danio rerio
Danio rerio
unclassified source_name:cleavage, 1h45min, mixed sex, replicate 3 title:cleavage_1h45min_mixed_rep3 description:Agilent Feature Extraction file: US84303580_251916110562_S01_GE1_105_Dec08_1_4.txt. Gene expression in wild type zebrafish cleavage, 1h45min, mixed sex, biological replicate 3.
12 GSM606877 blastula_2h15min_mixed_rep1 45,220 Ruder Boskovic Institute 2010-10-11 [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) RNA Danio rerio
Danio rerio
embryo blastula, 2h15min, mixed sex, replicate 1
13 GSM606878 blastula_2h15min_mixed_rep2 45,220 Ruder Boskovic Institute 2010-10-11 [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) RNA Danio rerio
Danio rerio
embryo blastula, 2h15min, mixed sex, replicate 2
14 GSM606879 blastula_2h45min_mixed_rep1 45,220 Ruder Boskovic Institute 2010-10-11 [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) RNA Danio rerio
Danio rerio
embryo blastula, 2h45min, mixed sex, replicate 1
15 GSM606880 blastula_2h45min_mixed_rep2 45,220 Ruder Boskovic Institute 2010-10-11 [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) RNA Danio rerio
Danio rerio
embryo blastula, 2h45min, mixed sex, replicate 2
16 GSM606881 blastula_3h20min_mixed_rep1 45,220 Ruder Boskovic Institute 2010-10-11 [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) RNA Danio rerio
Danio rerio
embryo blastula, 3h20min, mixed sex, replicate 1
17 GSM606882 blastula_3h20min_mixed_rep2 45,220 Ruder Boskovic Institute 2010-10-11 [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) RNA Danio rerio
Danio rerio
embryo blastula, 3h20min, mixed sex, replicate 2
18 GSM606883 blastula_4h_mixed_rep1 45,220 Ruder Boskovic Institute 2010-10-11 [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) RNA Danio rerio
Danio rerio
embryo blastula, 4h, mixed sex, replicate 1
19 GSM606884 blastula_4h_mixed_rep2 45,220 Ruder Boskovic Institute 2010-10-11 [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) RNA Danio rerio
Danio rerio
embryo blastula, 4h, mixed sex, replicate 2
20 GSM606885 blastula_4h40min_mixed_rep1 45,220 Ruder Boskovic Institute 2010-10-11 [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version) (GPL6457) RNA Danio rerio
Danio rerio
embryo blastula, 4h40min, mixed sex, replicate 1
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