Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(11,235)
  Primates
(55)
  Rodents
(3,938)
  Mammals
(293)
  Vertebrates
(491)
  Invertebrates
(722)
  Plants
(2,495)
  Bacteria
(1,010)
  Viruses
(0)
  Phages
(0)
  Unclassified
(83)
  All
(20,322)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(57)
  Tiling Array
(0)
  cDNA Array
(88)
  Oligo Array
(346)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(491)
 
  brain
(0)
  blood
(8)
  connective
(6)
  reproductive
(14)
  muscular
(87)
  digestive
(84)
  liver
(132)
  lung
(38)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(2)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(95)
  unclassified
(25)
  all
(491)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM249501 E4 RBC 38,535 Kobe RIKEN Center for Developmental Biology 2007-12-13 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
peripheral blood red blood cells from E4 chicken
2 GSM249502 E4 nRBC 38,535 Kobe RIKEN Center for Developmental Biology 2007-12-13 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
peripheral blood Fractionated non-red blood cells from E4 chicken
3 GSM249504 E4_RBC_2 38,535 Kobe RIKEN Center for Developmental Biology 2007-12-13 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
peripheral blood red blood cells from E4 chicken
4 GSM249507 E6_RBC 38,535 Kobe RIKEN Center for Developmental Biology 2007-12-13 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
peripheral blood red blood cells from E6 chicken
5 GSM249508 E6_RBC_2 38,535 Kobe RIKEN Center for Developmental Biology 2007-12-13 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
peripheral blood red blood cells from E6 chicken
6 GSM249509 E6_nRBCs 38,535 Kobe RIKEN Center for Developmental Biology 2007-12-13 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
peripheral blood Fractionated non-red blood cells from E6 chicken
7 GSM249510 E6_nRBCs_2 38,535 Kobe RIKEN Center for Developmental Biology 2007-12-13 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
peripheral blood Fractionated non-red blood cells from E6 chicken
8 GSM249511 E6_Heart 38,535 Kobe RIKEN Center for Developmental Biology 2007-12-13 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
heart E6 whole heart
9 GSM249512 E4_nRBC_2 38,535 Kobe RIKEN Center for Developmental Biology 2007-12-13 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus
peripheral blood Fractionated non-red blood cells from E4 chicken
10 GSM249337 Gm Control 1 9,193 Portland State University 2007-12-13 [cDNA Array] Gillichthys mirabilis cDNA microarray (GPL5573) RNA Gillichthys mirabilis
Gillichthys mirabilis
lung Gm control Reference gill tissue
11 GSM249338 Gm Control 2 9,193 Portland State University 2007-12-13 [cDNA Array] Gillichthys mirabilis cDNA microarray (GPL5573) RNA Gillichthys mirabilis
Gillichthys mirabilis
lung Gm control Reference gill tissue
12 GSM249339 Gm Control 3 9,193 Portland State University 2007-12-13 [cDNA Array] Gillichthys mirabilis cDNA microarray (GPL5573) RNA Gillichthys mirabilis
Gillichthys mirabilis
lung Gm control Reference gill tissue
13 GSM249340 Heat Shock 1 9,193 Portland State University 2007-12-13 [cDNA Array] Gillichthys mirabilis cDNA microarray (GPL5573) RNA Gillichthys mirabilis
Gillichthys mirabilis
lung Gm 4-h Heat Shock Reference gill tissue
14 GSM249341 Heat Shock 2 9,193 Portland State University 2007-12-13 [cDNA Array] Gillichthys mirabilis cDNA microarray (GPL5573) RNA Gillichthys mirabilis
Gillichthys mirabilis
lung Gm 4-h Heat Shock Reference gill tissue
15 GSM249342 Heat Shock 3 9,193 Portland State University 2007-12-13 [cDNA Array] Gillichthys mirabilis cDNA microarray (GPL5573) RNA Gillichthys mirabilis
Gillichthys mirabilis
lung Gm 4-h Heat Shock Reference gill tissue
16 GSM249343 Tb Control 1 9,193 Portland State University 2007-12-13 [cDNA Array] Gillichthys mirabilis cDNA microarray (GPL5573) RNA Trematomus bernacchii
Trematomus bernacchii
lung Tb control 1 Reference gill tissue
17 GSM249344 Tb Control 2 9,193 Portland State University 2007-12-13 [cDNA Array] Gillichthys mirabilis cDNA microarray (GPL5573) RNA Trematomus bernacchii
Trematomus bernacchii
lung Tb control 2 Reference gill tissue
18 GSM249345 Tb Control 3 9,193 Portland State University 2007-12-13 [cDNA Array] Gillichthys mirabilis cDNA microarray (GPL5573) RNA Trematomus bernacchii
Trematomus bernacchii
lung Tb control 3 Reference gill tissue
19 GSM249346 4 Hour Heat Shock 1 9,193 Portland State University 2007-12-13 [cDNA Array] Gillichthys mirabilis cDNA microarray (GPL5573) RNA Trematomus bernacchii
Trematomus bernacchii
lung Tb 4-h Heat Shock 1 Reference gill tissue
20 GSM249347 4 Hour Heat Shock 2 9,193 Portland State University 2007-12-13 [cDNA Array] Gillichthys mirabilis cDNA microarray (GPL5573) RNA Trematomus bernacchii
Trematomus bernacchii
lung Tb 4-h Heat Shock 2 Reference gill tissue
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