Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(13)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(2)		   GeneChip
(2,708)		   Tiling Array
(76)		   cDNA Array
(6,040)		   Oligo Array
(8,729)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(46)		   HT-Seq
(626)		   Other
(5)		   All
(18,263)		  
  brain
(2,316)		   blood
(853)		   connective
(622)		   reproductive
(1,377)		   muscular
(1,168)		   digestive
(523)		   liver
(2,287)		   lung
(795)		   urinary
(375)		   endo/exo-crine
(189)		   embryo
(2,115)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(1,158)		   unclassified
(4,485)		   all
(18,263)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM541687 Lateolabrax japonicus_DGE A 151,285 ZheJiang University 2010-05-06 [HT Sequencing] Illumina Genome Analyzer II (Lateolabrax japonicus) (GPL10398) SRA Lateolabrax japonicus
Lateolabrax japonicus		 pooled head kidney and spleen tissues
2 GSM541688 Lateolabrax japonicus_DGE B 127,170 ZheJiang University 2010-05-06 [HT Sequencing] Illumina Genome Analyzer II (Lateolabrax japonicus) (GPL10398) SRA Lateolabrax japonicus
Lateolabrax japonicus		 pooled head kidney and spleen tissues
3 GSM541795 Lateolabrax japonicus_RNA-Seq1 0 ZheJiang University 2010-05-06 [HT Sequencing] Illumina Genome Analyzer II (Lateolabrax japonicus) (GPL10398) SRA Lateolabrax japonicus
Lateolabrax japonicus		 pooled head kidney and spleen tissues
4 GSM984901 spleen from Herts/33 group, rep1 38,535 Yangzhou University 2012-08-14 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus		 spleen spleen from Herts/33-infected chicken, day 2 post infection
5 GSM984902 spleen from Herts/33 group, rep2 38,535 Yangzhou University 2012-08-14 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus		 spleen spleen from Herts/33-infected chicken, day 2 post infection
6 GSM984903 spleen from Herts/33 group, rep3 38,535 Yangzhou University 2012-08-14 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus		 spleen spleen from Herts/33-infected chicken, day 2 post infection
7 GSM984904 spleen from JS5/05 group, rep1 38,535 Yangzhou University 2012-08-14 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus		 spleen spleen from JS5/05-infected chicken, day 2 post infection
8 GSM984905 spleen from JS5/05 group, rep2 38,535 Yangzhou University 2012-08-14 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus		 spleen spleen from JS5/05-infected chicken, day 2 post infection
9 GSM984906 spleen from JS5/05 group, rep3 38,535 Yangzhou University 2012-08-14 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus		 spleen spleen from JS5/05-infected chicken, day 2 post infection
10 GSM984907 spleen from control group, rep1 38,535 Yangzhou University 2012-08-14 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus		 spleen spleen from mock-infected chicken
11 GSM984908 spleen from control group, rep2 38,535 Yangzhou University 2012-08-14 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus		 spleen spleen from mock-infected chicken
12 GSM984909 spleen from control group, rep3 38,535 Yangzhou University 2012-08-14 [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) RNA Gallus gallus
Gallus gallus		 spleen spleen from mock-infected chicken
13 GSM540643 WT1 120,232 Yale University 2010-05-04 [HT Sequencing] Illumina Genome Analyzer (Danio rerio) (GPL10164) SRA Danio rerio
Danio rerio		 embryo 48hpf embryo, WT
14 GSM540646 MZago2 mutant YΔ90 60,799 Yale University 2010-05-04 [HT Sequencing] Illumina Genome Analyzer (Danio rerio) (GPL10164) SRA Danio rerio
Danio rerio		 embryo 48hpf embryo, MZago2 mutant
15 GSM953029 Tailbud WT 3 hour 1 43,603 Yale University 2012-06-27 [Oligo Array] Agilent-026437 D. rerio (Zebrafish) Oligo Microarray V3 (Probe Name version) (GPL14664) RNA Danio rerio
Danio rerio		 unclassified source_name:tailbud, 3hr, no treatment, replicate 1 title:Tailbud WT 3 hour 1
16 GSM953030 Tailbud WT 3 hour 2 43,603 Yale University 2012-06-27 [Oligo Array] Agilent-026437 D. rerio (Zebrafish) Oligo Microarray V3 (Probe Name version) (GPL14664) RNA Danio rerio
Danio rerio		 unclassified source_name:tailbud, 3hr, no treatment, replicate 2 title:Tailbud WT 3 hour 2
17 GSM953031 Tailbud WT 3 hour 3 43,603 Yale University 2012-06-27 [Oligo Array] Agilent-026437 D. rerio (Zebrafish) Oligo Microarray V3 (Probe Name version) (GPL14664) RNA Danio rerio
Danio rerio		 unclassified source_name:tailbud, 3hr, no treatment, replicate 3 title:Tailbud WT 3 hour 3
18 GSM953032 Tailbud SU5402 3 hour 1 43,603 Yale University 2012-06-27 [Oligo Array] Agilent-026437 D. rerio (Zebrafish) Oligo Microarray V3 (Probe Name version) (GPL14664) RNA Danio rerio
Danio rerio		 unclassified source_name:tailbud, 3hr, SU5402 treatment, replicate 1 title:Tailbud SU5402 3 hour 1
19 GSM953033 Tailbud SU5402 3 hour 2 43,603 Yale University 2012-06-27 [Oligo Array] Agilent-026437 D. rerio (Zebrafish) Oligo Microarray V3 (Probe Name version) (GPL14664) RNA Danio rerio
Danio rerio		 unclassified source_name:tailbud, 3hr, SU5402 treatment, replicate 2 title:Tailbud SU5402 3 hour 2
20 GSM953034 Tailbud LiCl 3 hour 1 43,603 Yale University 2012-06-27 [Oligo Array] Agilent-026437 D. rerio (Zebrafish) Oligo Microarray V3 (Probe Name version) (GPL14664) RNA Danio rerio
Danio rerio		 unclassified source_name:tailbud, 3hr, LiCl treatment, replicate 1 title:Tailbud LiCl 3 hour 1
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