Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(7)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(1)
  GeneChip
(265)
  Tiling Array
(14)
  cDNA Array
(268)
  Oligo Array
(606)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(2)
  HT-Seq
(198)
  Other
(1)
  All
(1,364)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 The impact of experience-dependent and independent factors on gene expression in songbird brain (GSE36748) [cDNA Array] Songbird Neurogenomics Initiative 20K Array (GPL9554) University of Illinois 2012-03-23 Taeniopygia guttata,Sturnus vulgaris
Taeniopygia guttata,Sturnus vulgaris
9,838,080
(20,160 x 488)
488 by_platform
by_series
2 Temperature-related gene expression reaction norms in brown trout (GSE52341) [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 2, 02/08 (GPL13225) Aarhus University 2013-11-13 Salmo trutta
Salmo trutta
4,043,520
(33,696 x 120)
120 by_platform
by_series
3 Differences in transcription levels among wild, domesticated, and hybrid Atlantic salmon (Salmo salar) from two environments (GSE30555) [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 2, 02/08 (GPL13225) Dalhousie University 2011-07-11 Salmo salar
Salmo salar
3,234,816
(33,696 x 96)
96 by_platform
by_series
4 Normal and shortened photoperiods in liver, ovary, and pituitarty (GSE19478) [cDNA Array] GRASP 16K version 2 (GPL2716) CSIRO 2009-12-15 Oncorhynchus mykiss
Oncorhynchus mykiss
3,171,024
(17,328 x 183)
61 60 62 by_platform
by_series
5 SEA BREAM_CONFINEMENT (GSE16633) [cDNA Array] AQUAFIRST_seabream_18K_Ver1 (GPL8467) NUI Galway 2009-06-16 Sparus aurata
Sparus aurata
2,806,272
(38,976 x 72)
72 by_platform
by_series
6 Genetic markers of the immune response of Atlantic salmon (Salmo salar) to Infectious Salmon Anemia Virus (ISAV) (GSE19630) [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) Fisheries & Oceans Canada 2009-12-23 Salmo salar
Salmo salar
2,729,376
(33,696 x 81)
81 by_platform
by_series
7 eQTL mapping in Lake Whitefish Species Pairs. (GSE11378) [cDNA Array] cGRASP Salmon 16k cDNA array (GPL6260) Université LAVAL 2008-05-07 Coregonus clupeaformis
Coregonus clupeaformis
2,668,512
(17,328 x 154)
154 by_platform
by_series
8 The impact of experience-dependent and independent factors on gene expression in songbird brain [e08] (GSE36734) [cDNA Array] Songbird Neurogenomics Initiative 20K Array (GPL9554) University of Illinois 2012-03-23 Taeniopygia guttata,Sturnus vulgaris
Taeniopygia guttata,Sturnus vulgaris
2,419,200
(20,160 x 120)
120 by_platform
by_series
9 Transcriptomics of environmental adaptation and survival in wild adult Pacific Sockeye Salmon (Oncorhynchus nerka) during spawning migration (GSE22346) [cDNA Array] GRASP salmonid array, 16k v2.0 chip, updated data files 15 July 2005 (GPL3976) Fisheries and Oceans Canada 2010-06-15 Oncorhynchus nerka
Oncorhynchus nerka
2,096,688
(17,328 x 121)
36 85 by_platform
by_series
10 Pacific salmon gill samples (GSE22179) [cDNA Array] GRASP 16K version 2 (GPL2716) University of British Columbia 2010-06-07 Oncorhynchus nerka
Oncorhynchus nerka
1,819,440
(17,328 x 105)
105 by_platform
by_series
11 Pacific salmon gill samples: fate tracking in river (GSE22177) [cDNA Array] GRASP 16K version 2 (GPL2716) University of British Columbia 2010-06-07 Oncorhynchus nerka
Oncorhynchus nerka
1,802,112
(17,328 x 104)
104 by_platform
by_series
12 Salvelinus Microarray experiment: cross-specific transcriptome in hybrids (GSE22008) [cDNA Array] GRASP 16K version 2 (GPL2716) Laval university 2010-05-26 Salvelinus fontinalis
Salvelinus fontinalis
1,663,488
(17,328 x 96)
96 by_platform
by_series
13 Salvelinus Microarray experiment: The influence of parental effects on transcriptomic landscape during early development in brook charr (Salvelinus fontinalis, Mitchill) (GSE42435) [cDNA Array] GRASP 16K version 2 (GPL2716) Laval university 2012-11-21 Salvelinus fontinalis
Salvelinus fontinalis
1,663,488
(17,328 x 96)
96 by_platform
by_series
14 Circadian Transcriptome of the Chicken Pineal In Vitro (GSE5292) [cDNA Array] Chick Pineal 2006 (GPL3731) Texas A&M University 2006-07-11 Gallus gallus
Gallus gallus
1,584,464
(8,084 x 196)
196 by_platform
by_series
15 Seasonal Changes in Patterns of Gene Expression in Avian Song Control Brain Regions (GSE28347) [cDNA Array] Songbird Neurogenomics Initiative 20K Array (GPL9554) University of Illinois 2011-04-03 Zonotrichia leucophrys gambelii,Taeniopygia guttata
Zonotrichia leucophrys gambelii,Taeniopygia guttata
1,431,360
(20,160 x 71)
71 by_platform
by_series
16 The impact of experience-dependent and independent factors on gene expression in songbird brain [e01] (GSE36705) [cDNA Array] Songbird Neurogenomics Initiative 20K Array (GPL9554) University of Illinois 2012-03-22 Zonotrichia leucophrys gambelii,Taeniopygia guttata
Zonotrichia leucophrys gambelii,Taeniopygia guttata
1,431,360
(20,160 x 71)
71 by_platform
by_series
17 Salmon Spawning Migration: Metabolic Shifts and Environmental Triggers (GSE13657) [cDNA Array] GRASP salmonid array, 16k v2.0 chip, updated data files 15 July 2005 (GPL3976) Fisheries and Oceans Canada 2008-11-18 Oncorhynchus nerka
Oncorhynchus nerka
1,386,240
(17,328 x 80)
80 by_platform
by_series
18 Salvelinus Microarray experiment: selected line vs control line (GSE20490) [cDNA Array] cGRASP 32K (Salmonid) cDNA - Release Date 02/08 (GPL10096) University Laval 2010-02-23 Salvelinus fontinalis
Salvelinus fontinalis
1,347,840
(33,696 x 40)
40 by_platform
by_series
19 Differentiating size-dependent responses of juvenile pink salmon (Oncorhynchus gorbuscha) to sea lice (Lepeophtheirus salmonis) infections (GSE27528) [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 2, 02/08 (GPL13225) The University of Victoria 2011-02-25 Oncorhynchus gorbuscha
Oncorhynchus gorbuscha
1,213,056
(33,696 x 36)
36 by_platform
by_series
20 Vaccination against yersiniosis induces a specific gill transcriptome biosignature in Atlantic salmon (GSE36332) [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 2, 02/08 (GPL13225) University of Tasmania 2012-03-07 Salmo salar
Salmo salar
1,213,056
(33,696 x 36)
36 by_platform
by_series
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