Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(743)
  Primates
(5)
  Rodents
(386)
  Mammals
(31)
  Vertebrates
(51)
  Invertebrates
(187)
  Plants
(209)
  Bacteria
(89)
  Viruses
(1)
  Phages
(0)
  Unclassified
(12)
  All
(1,715)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(6)
  Tiling Array
(1)
  cDNA Array
(11)
  Oligo Array
(20)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(13)
  Other
(0)
  All
(51)
 
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Salvelinus Microarray experiment: selected line vs control line (GSE20490) [cDNA Array] cGRASP 32K (Salmonid) cDNA - Release Date 02/08 (GPL10096) University Laval 2010-02-23 Salvelinus fontinalis
Salvelinus fontinalis
1,347,840
(33,696 x 40)
40 by_platform
by_series
2 Gilthead seabream pathogen exposure to Enteromyxum leei (GSE20619) [cDNA Array] AQUAFIRST_seabream_18K_Ver1 (GPL8467) NUI Galway 2010-03-04 Sparus aurata
Sparus aurata
1,169,280
(38,976 x 30)
30 by_platform
by_series
3 Sex bias and dosage compensation in the zebra finch versus chicken genomes: general and specialized patterns among birds (GSE20035) [cDNA Array] Songbird Neurogenomics Initiative 20K Array (GPL9554) University of Illinois 2010-01-25 Taeniopygia guttata
Taeniopygia guttata
967,680
(20,160 x 48)
48 by_platform
by_series
4 Lake Whitefish microarray experiment: dwarf vs normal ecotypes (GSE21130) [cDNA Array] GRASP 16K version 2 (GPL2716) Université Laval 2010-03-30 Coregonus clupeaformis
Coregonus clupeaformis
831,744
(17,328 x 48)
48 by_platform
by_series
5 Gilthead seabream pathogen exposure to Enteromyxum leei (GSE20619) [cDNA Array] AQUAFIRST_seabream_18K_Ver1 (condensed) (GPL10126) NUI Galway 2010-03-04 Sparus aurata
Sparus aurata
566,076
(20,217 x 28)
28 by_platform
by_series
6 Rainbow trout red blood cells (RBCs): Control vs Heat shock, repeated samples from individuals (GSE21084) [cDNA Array] GRASP 16K version 2 (GPL2716) University of Ottawa 2010-03-26 Oncorhynchus mykiss
Oncorhynchus mykiss
554,496
(17,328 x 32)
32 by_platform
by_series
7 Steady State Thermal Acclimation in the Eurythermal Goby fish, Gillichthys mirabilis (GSE20849) [cDNA Array] Gillichthys mirabilis cDNA microarray (Last Annotated 2/2010 by Cheryl A. Logan) (GPL10169) Stanford University 2010-03-12 Gillichthys mirabilis
Gillichthys mirabilis
422,400
(19,200 x 22)
22 by_platform
by_series
8 Concerted action of Helios and Ikaros balances the strength of B cell receptor signaling and controls the expression of inositol 5-phosphatase SHIP (GSE20946) [cDNA Array] UTU Chicken BursaEST 37K array (GPL10224) University of Turku 2010-03-18 Gallus gallus
Gallus gallus
147,456
(36,864 x 4)
4 by_platform
by_series
9 Investigations of gene expression in fathead minnow (Pimephales promelas) brain tissue reveal toxicological impacts of RDX exposure (GSE21153) [cDNA Array] US Army ERDC Fathead minnow brain tissue cDNA 4K Microarray (GPL10277) US Army ERDC 2010-03-31 Pimephales promelas
Pimephales promelas
123,840
(4,128 x 30)
30 by_platform
by_series
10 Swimming down-regulates ovarian transcriptomic response of rainbow trout Oncorhynchus mykiss (GSE20131) [cDNA Array] UKU_trout_1.8K_v1 (GPL6154) Universitat de Barcelona 2010-02-01 Oncorhynchus mykiss
Oncorhynchus mykiss
22,464
(11,232 x 2)
2 by_platform
by_series
11 Cellular and molecular evidence for a role of tumor necrosis factor alpha in the ovulatory mechanism of trout (GSE20296) [cDNA Array] UKU_trout_1.8K_v1 (condensed) (GPL10092) University of Barcelona 2010-02-12 Oncorhynchus mykiss
Oncorhynchus mykiss
1,726
(1,726 x 1)
1 by_platform
by_series