Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(13)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(2)		   GeneChip
(2,708)		   Tiling Array
(76)		   cDNA Array
(6,040)		   Oligo Array
(8,729)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(46)		   HT-Seq
(626)		   Other
(5)		   All
(18,263)		  
  brain
(0)		   blood
(292)		   connective
(0)		   reproductive
(0)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(0)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(0)		   unclassified
(1,461)		   all
(6,040)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM155263 Control (C.B.1.Cy3) Vs pooled Reference Cy5 384 Woods Hole Oceanographic Institution 2007-01-13 [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 unclassified source_name:Control trout total RNA Reference total RNA title:Control (C.B.1.Cy3) Vs pooled Reference Cy5 description:Same reference RNA pool was used for all the 16 hybridizations done in this experiment.
2 GSM155264 Control (C.B.2.)Cy3 Vs Reference pool Cy5 384 Woods Hole Oceanographic Institution 2007-01-13 [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 unclassified source_name:C.B.2. Reference RNA title:Control (C.B.2.)Cy3 Vs Reference pool Cy5 description:Same reference RNA pool was used for all the 16 hybridizations done in this experiment.
3 GSM155265 Control (C.B.3)Cy5 Vs Reference pool Cy3 384 Woods Hole Oceanographic Institution 2007-01-13 [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 unclassified source_name:Reference RNA C.B.3. title:Control (C.B.3)Cy5 Vs Reference pool Cy3 description:Same reference RNA pool was used for all the 16 hybridizations done in this experiment.
4 GSM155266 Control (C.B.4.) Cy5 Vs Reference pool Cy3 384 Woods Hole Oceanographic Institution 2007-01-13 [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 unclassified source_name:Reference pool RNA C.B.4. title:Control (C.B.4.) Cy5 Vs Reference pool Cy3 description:Same reference RNA pool was used for all the 16 hybridizations done in this experiment.
5 GSM155267 BNF (B.B.2) Cy3 Vs Reference pool Cy5 384 Woods Hole Oceanographic Institution 2007-01-13 [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 unclassified source_name:Beta-naphthoflavone (B.B.2) Reference RNA title:BNF (B.B.2) Cy3 Vs Reference pool Cy5 description:Same reference total RNA pool was used for all the 16 hybridizations done in the experiment.
6 GSM155268 Reference RNA.Cy3 Vs BNF (B.B.3.).Cy5 384 Woods Hole Oceanographic Institution 2007-01-13 [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 unclassified source_name:Reference RNA Beta-naphthoflavone (B.B.3.) title:Reference RNA.Cy3 Vs BNF (B.B.3.).Cy5 description:Same reference total RNA pool was used for all the 16 hybridizations done in the experiment.
7 GSM155269 Reference RNA. Cy3 Vs BNF (B.B.6.).Cy5 384 Woods Hole Oceanographic Institution 2007-01-13 [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 unclassified source_name:Reference RNA Beta-naphthoflavone (B.B.6.) title:Reference RNA. Cy3 Vs BNF (B.B.6.).Cy5 description:Same reference total RNA pool was used for all the 16 hybridizations done in the experiment.
8 GSM155270 BNF (B.B.4.)Cy3 Vs Reference RNA Cy5 384 Woods Hole Oceanographic Institution 2007-01-13 [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 unclassified source_name:Beta-naphthoflavone (B.B.4) Reference RNA title:BNF (B.B.4.)Cy3 Vs Reference RNA Cy5 description:Same reference total RNA pool was used for all the 16 hybridizations done in the experiment.
9 GSM155274 Reference RNA Cy3 Vs RVT (R.B.1.) Cy5 384 Woods Hole Oceanographic Institution 2007-01-14 [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 unclassified source_name:Reference RNA Resveratrol (RVT; R.B.1.) title:Reference RNA Cy3 Vs RVT (R.B.1.) Cy5 description:Same reference RNA was used for hybridization of all the samples in the experiment.
10 GSM155275 Resveratrol (R.B.3.) Cy3 Vs Reference Cy5 384 Woods Hole Oceanographic Institution 2007-01-14 [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 unclassified source_name:Resveratrol (R.B.3.) Reference RNA title:Resveratrol (R.B.3.) Cy3 Vs Reference Cy5 description:Same reference RNA was used for hybridization of all the samples in the experiment.
11 GSM155276 Reference RNA Cy3 Vs Resveratrol (R.B.4.) Cy5 384 Woods Hole Oceanographic Institution 2007-01-14 [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 unclassified source_name:Reference RNA Resveratrol (R.B.4) title:Reference RNA Cy3 Vs Resveratrol (R.B.4.) Cy5 description:Same reference RNA was used for hybridization of all the samples in the experiment.
12 GSM155277 Resveratrol (R.B.6.) Cy3 Vs Reference RNA Cy5 384 Woods Hole Oceanographic Institution 2007-01-14 [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 unclassified source_name:Resveratrol (R.B.6) Cy3 Reference RNA title:Resveratrol (R.B.6.) Cy3 Vs Reference RNA Cy5 description:Same reference RNA was used for hybridization of all the samples in the experiment.
13 GSM155278 Resveratrol+Beta-naphthoflavone (RB.B.2)Cy3 Vs Reference RNA Cy5 384 Woods Hole Oceanographic Institution 2007-01-14 [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 unclassified source_name:Resveratrol+Beta-naphthoflavone (RB.B.2)Cy3 Reference RNA title:Resveratrol+Beta-naphthoflavone (RB.B.2)Cy3 Vs Reference RNA Cy5 description:Same reference RNA was used for hybridization of all the samples in the experiment.
14 GSM155279 Resveratrol+Beta-naphthoflavone (RB.B.3)Cy3 Vs Reference RNA Cy5 384 Woods Hole Oceanographic Institution 2007-01-14 [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 unclassified source_name:Resveratrol+Beta-naphthoflavone (RB.B.3)Cy3 Reference RNA title:Resveratrol+Beta-naphthoflavone (RB.B.3)Cy3 Vs Reference RNA Cy5 description:Same reference RNA pool was used for the hybridizations done in this experiment.
15 GSM155280 Reference RNA Cy3 Vs Resveratrol+Beta-naphthoflavone (RB.B.4)Cy5 384 Woods Hole Oceanographic Institution 2007-01-14 [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 unclassified source_name:Reference RNA Resveratrol+Beta-naphthoflavone (RB.B.4)Cy5 title:Reference RNA Cy3 Vs Resveratrol+Beta-naphthoflavone (RB.B.4)Cy5 description:Same reference RNA pool was used for the hybridizations done in this experiment.
16 GSM155281 Reference RNA Cy3 Vs Resveratrol+Beta-naphthoflavone (RB.B.3)Cy5 384 Woods Hole Oceanographic Institution 2007-01-14 [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 unclassified source_name:Reference RNA Resveratrol+Beta-naphthoflavone (RB.B.5) title:Reference RNA Cy3 Vs Resveratrol+Beta-naphthoflavone (RB.B.3)Cy5 description:Same reference RNA pool was used for the hybridizations done in this experiment.
17 GSM158688 Skymo lake cutthroat trout liver RNA 384 Woods Hole Oceanographic Institution 2007-01-27 [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) RNA Oncorhynchus clarkii,Oncorhynchus mykiss
Oncorhynchus clarkii,Oncorhynchus mykiss		 liver/hepato Skymo lake cutthroat trout liver RNA Reference RNA
18 GSM158689 Skymo lake cutthroat trout-2 liver RNA 384 Woods Hole Oceanographic Institution 2007-01-27 [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) RNA Oncorhynchus mykiss,Oncorhynchus clarkii
Oncorhynchus mykiss,Oncorhynchus clarkii		 liver/hepato Reference RNA Skymo lake cutthroat trout liver RNA
19 GSM158690 Skymo lake cutthroat-3 trout liver RNA 384 Woods Hole Oceanographic Institution 2007-01-27 [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) RNA Oncorhynchus clarkii,Oncorhynchus mykiss
Oncorhynchus clarkii,Oncorhynchus mykiss		 liver/hepato Skymo lake cutthroat trout liver RNA Reference RNA
20 GSM158691 Wilcox lake cutthroat trout-1 liver RNA 384 Woods Hole Oceanographic Institution 2007-01-27 [cDNA Array] UWVJLAB RT 150 v.1.0 (GPL3713) RNA Oncorhynchus mykiss,Oncorhynchus clarkii
Oncorhynchus mykiss,Oncorhynchus clarkii		 liver/hepato Reference RNA Wilcox lake Cutthroat trout liver RNA
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