Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(13)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(2)		   GeneChip
(2,708)		   Tiling Array
(76)		   cDNA Array
(6,040)		   Oligo Array
(8,729)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(46)		   HT-Seq
(626)		   Other
(5)		   All
(18,263)		  
  brain
(696)		   blood
(292)		   connective
(88)		   reproductive
(392)		   muscular
(403)		   digestive
(101)		   liver
(955)		   lung
(674)		   urinary
(251)		   endo/exo-crine
(150)		   embryo
(281)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(296)		   unclassified
(1,461)		   all
(6,040)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM16101 DD035.031 Sep 24 Atlantic Salmon Head Kidney Study Slide 031 8,736 University of Wisconsin - Milwaukee 2004-02-02 [cDNA Array] Salmonid 3600 - Feb 17 2003 (GPL966) RNA Salmo salar
Salmo salar		 kidney Cy3-Labeled Piscirickettsia salmonis-infected Salmo salar head kidney Cy5-Labeled Non-infected Salmo salar head kidney
2 GSM16389 DD035.032 Sep 24 Atlantic Salmon Head Kidney Study Slide 032 8,736 University of Wisconsin - Milwaukee 2004-02-04 [cDNA Array] Salmonid 3600 - Feb 17 2003 (GPL966) RNA Salmo salar
Salmo salar		 kidney Cy3-Labeled Piscirickettsia salmonis-infected Salmo salar head kidney Cy5-Labeled Non-infected Salmo salar head kidney
3 GSM16390 DD035.033 Sep 24 Atlantic Salmon Head Kidney Study Slide 033 8,736 University of Wisconsin - Milwaukee 2004-02-04 [cDNA Array] Salmonid 3600 - Feb 17 2003 (GPL966) RNA Salmo salar
Salmo salar		 kidney Cy3-Labeled Non-infected Salmo salar head kidney Cy5-Labeled Piscirickettsia salmonis-infected Salmo salar head kidney
4 GSM16391 DD035.034 Sep 24 Atlantic Salmon Head Kidney Study Slide 034 8,736 University of Wisconsin - Milwaukee 2004-02-04 [cDNA Array] Salmonid 3600 - Feb 17 2003 (GPL966) RNA Salmo salar
Salmo salar		 kidney Cy3-Labeled Non-infected Salmo salar head kidney Cy5-Labeled Piscirickettsia salmonis-infected Salmo salar head kidney
5 GSM22362 kidney stress, day 5, direct 8,311 Akvaforsk 2004-05-07 [cDNA Array] salmonid fish version 1.0 (GPL1212) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 kidney stressed kidney control kidney
6 GSM22358 kidney stress, day 1, direct 8,053 Akvaforsk 2004-05-07 [cDNA Array] salmonid fish version 1.0 (GPL1212) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 kidney stressed kidney control kidney
7 GSM22360 kidney stress, day 3, direct 6,900 Akvaforsk 2004-05-07 [cDNA Array] salmonid fish version 1.0 (GPL1212) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 kidney stressed kidney control kidney
8 GSM22363 kidney stress, day 5, reverse 6,844 Akvaforsk 2004-05-07 [cDNA Array] salmonid fish version 1.0 (GPL1212) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 kidney control kidney stressed kidney
9 GSM22361 kidney stress, day 3, reverse 6,837 Akvaforsk 2004-05-07 [cDNA Array] salmonid fish version 1.0 (GPL1212) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 kidney control kidney stressed kidney
10 GSM22359 kidney stress, day 1, reverse 5,315 Akvaforsk 2004-05-07 [cDNA Array] salmonid fish version 1.0 (GPL1212) RNA Oncorhynchus mykiss
Oncorhynchus mykiss		 kidney control kidney stressed kidney
11 GSM37550 kidney sea bream-1 21,600 HCMR 2004-12-13 [cDNA Array] SA-DEV-VS1 (GPL1516) RNA Sparus aurata
Sparus aurata		 kidney kidney sea bream-1
12 GSM37551 kidney sea bream-2 21,600 HCMR 2004-12-13 [cDNA Array] SA-DEV-VS1 (GPL1516) RNA Sparus aurata
Sparus aurata		 kidney kidney sea bream-2
13 GSM143184 Gene Transcription Profiles during Development of Mucosal Immunity Slide08 (T22-T24) 15,769 South Dakota State University 2006-10-30 [cDNA Array] FHCRC Chicken 13K v2.0 (GPL1836) RNA Gallus gallus
Gallus gallus		 bladder T22 T24
14 GSM143187 Gene Transcription Profiles during Development of Mucosal Immunity Slide09 (T24-C) 15,769 South Dakota State University 2006-10-30 [cDNA Array] FHCRC Chicken 13K v2.0 (GPL1836) RNA Gallus gallus
Gallus gallus		 bladder T24 C (pooled common conference)
15 GSM143217 Gene Transcription Profiles during Development of Mucosal Immunity Slide15 (T12-T24) 15,769 South Dakota State University 2006-10-30 [cDNA Array] FHCRC Chicken 13K v2.0 (GPL1836) RNA Gallus gallus
Gallus gallus		 bladder T12 T24
16 GSM143228 Gene Transcription Profiles during Development of Mucosal Immunity Slide18 (T24-T3) 15,769 South Dakota State University 2006-10-30 [cDNA Array] FHCRC Chicken 13K v2.0 (GPL1836) RNA Gallus gallus
Gallus gallus		 bladder T24 T3
17 GSM159443 Sasa kidney sample on controls, replicate 1 17,328 Fisheries and Oceans Canada 2007-01-30 [cDNA Array] GRASP salmonid array, 16k v2.0 chip, updated data files 15 July 2005 (GPL3976) RNA Salmo salar
Salmo salar		 kidney kidney tissue from a control fish , replicate 1 pooled reference sample from all individuals collected
18 GSM159444 Sasa kidney sample on controls, replicate 2 17,328 Fisheries and Oceans Canada 2007-01-30 [cDNA Array] GRASP salmonid array, 16k v2.0 chip, updated data files 15 July 2005 (GPL3976) RNA Salmo salar
Salmo salar		 kidney kidney tissue from a control fish , replicate 2 pooled reference sample from all individuals collected
19 GSM159445 Sasa kidney sample on controls, replicate 3 17,328 Fisheries and Oceans Canada 2007-01-30 [cDNA Array] GRASP salmonid array, 16k v2.0 chip, updated data files 15 July 2005 (GPL3976) RNA Salmo salar
Salmo salar		 kidney kidney tissue from a control fish , replicate 3 pooled reference sample from all individuals collected
20 GSM159446 Sasa kidney sample on controls, replicate 4 17,328 Fisheries and Oceans Canada 2007-01-30 [cDNA Array] GRASP salmonid array, 16k v2.0 chip, updated data files 15 July 2005 (GPL3976) RNA Salmo salar
Salmo salar		 kidney kidney tissue from a control fish , replicate 4 pooled reference sample from all individuals collected
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