Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)
  Primates
(4,928)
  Rodents
(181,106)
  Mammals
(16,260)
  Vertebrates
(18,263)
  Invertebrates
(37,338)
  Plants
(91,454)
  Bacteria
(39,082)
  Viruses
(1,266)
  Phages
(101)
  Unclassified
(5,242)
  All
(898,944)
 
  SAGE NlaIII
(13)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(2)
  GeneChip
(2,708)
  Tiling Array
(76)
  cDNA Array
(6,040)
  Oligo Array
(8,729)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(46)
  HT-Seq
(626)
  Other
(5)
  All
(18,263)
 
  brain
(696)
  blood
(292)
  connective
(88)
  reproductive
(392)
  muscular
(403)
  digestive
(101)
  liver
(955)
  lung
(674)
  urinary
(251)
  endo/exo-crine
(150)
  embryo
(281)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(296)
  unclassified
(1,461)
  all
(6,040)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1059459 High_sensitive_1 33,696 INTA, Universidad de Chile 2013-01-02 [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) RNA Salmo salar
Salmo salar
kidney A RNA pool from the head kidney of 5 fishes belonging to Family 1 without challenge against P. Salmonis were used as control
2 GSM1059460 High_sensitive_2 33,696 INTA, Universidad de Chile 2013-01-02 [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) RNA Salmo salar
Salmo salar
kidney A RNA pool from the head kidney of 5 fishes belonging to Family 2 without challenge against P. Salmonis were used as control
3 GSM1059461 High_sensitive_3 33,696 INTA, Universidad de Chile 2013-01-02 [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) RNA Salmo salar
Salmo salar
kidney A RNA pool from the head kidney of 5 fishes belonging to Family 3 without challenge against P. Salmonis were used as control
4 GSM1059462 Low_sensitive_1 33,696 INTA, Universidad de Chile 2013-01-02 [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) RNA Salmo salar
Salmo salar
kidney A RNA pool from the head kidney of 5 fishes belonging to Family 4 without challenge against P. Salmonis were used as control
5 GSM1059463 Low_sensitive_2 33,696 INTA, Universidad de Chile 2013-01-02 [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) RNA Salmo salar
Salmo salar
kidney A RNA pool from the head kidney of 5 fishes belonging to Family 5 without challenge against P. Salmonis were used as control
6 GSM1059464 Low_sensitive_3 33,696 INTA, Universidad de Chile 2013-01-02 [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) RNA Salmo salar
Salmo salar
kidney A RNA pool from the head kidney of 5 fishes belonging to Family 6 without challenge against P. Salmonis were used as control
7 GSM489675 0h Ssa family 8_control_replicate 1 33,696 Fisheries & Oceans Canada 2009-12-23 [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) RNA Salmo salar
Salmo salar
kidney Head-kidney_control_8 (0h) Salmo salar reference RNA
8 GSM489676 0h Ssa family 8_control_replicate 2 33,696 Fisheries & Oceans Canada 2009-12-23 [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) RNA Salmo salar
Salmo salar
kidney Head-kidney_control_8 (0h) Salmo salar reference RNA
9 GSM489677 0h Ssa family 8_control_replicate 3 33,696 Fisheries & Oceans Canada 2009-12-23 [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) RNA Salmo salar
Salmo salar
kidney Head-kidney_control_8 (0h) Salmo salar reference RNA
10 GSM489678 0h Ssa family 9_control_replicate 1 33,696 Fisheries & Oceans Canada 2009-12-23 [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) RNA Salmo salar
Salmo salar
kidney Head-kidney_control_8 (0h) Salmo salar reference RNA
11 GSM489679 0h Ssa family 9_control_replicate 2 33,696 Fisheries & Oceans Canada 2009-12-23 [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) RNA Salmo salar
Salmo salar
kidney Head-kidney_control_9 (0h) Salmo salar reference RNA
12 GSM489680 0h Ssa family 9_control_replicate 3 33,696 Fisheries & Oceans Canada 2009-12-23 [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) RNA Salmo salar
Salmo salar
kidney Head-kidney_control_9 (0h) Salmo salar reference RNA
13 GSM489681 0h Ssa family 9_control_replicate 4 33,696 Fisheries & Oceans Canada 2009-12-23 [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) RNA Salmo salar
Salmo salar
kidney Head-kidney_control_9 (0h) Salmo salar reference RNA
14 GSM489682 6h Ssa family 8_control_replicate 1 33,696 Fisheries & Oceans Canada 2009-12-23 [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) RNA Salmo salar
Salmo salar
kidney Head-kidney_control_8 (6h) Salmo salar reference RNA
15 GSM489683 6h Ssa family 8_control_replicate 2 33,696 Fisheries & Oceans Canada 2009-12-23 [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) RNA Salmo salar
Salmo salar
kidney Head-kidney_control_8 (6h) Salmo salar reference RNA
16 GSM489684 6h Ssa family 8_control_replicate 3 33,696 Fisheries & Oceans Canada 2009-12-23 [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) RNA Salmo salar
Salmo salar
kidney Head-kidney_control_8 (6h) Salmo salar reference RNA
17 GSM489685 6h Ssa family 8_control_replicate 4 33,696 Fisheries & Oceans Canada 2009-12-23 [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) RNA Salmo salar
Salmo salar
kidney Head-kidney_control_8 (6h) Salmo salar reference RNA
18 GSM489686 6h Ssa family 9_control_replicate 1 33,696 Fisheries & Oceans Canada 2009-12-23 [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) RNA Salmo salar
Salmo salar
kidney Head-kidney_control_9 (6h) Salmo salar reference RNA
19 GSM489687 6h Ssa family 9_control_replicate 2 33,696 Fisheries & Oceans Canada 2009-12-23 [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) RNA Salmo salar
Salmo salar
kidney Head-kidney_control_9 (6h) Salmo salar reference RNA
20 GSM489688 6h Ssa family 9_control_replicate 3 33,696 Fisheries & Oceans Canada 2009-12-23 [cDNA Array] cGRASP Salmonid array, 32K cDNA, version 1, February 2009 (GPL8904) RNA Salmo salar
Salmo salar
kidney Head-kidney_control_9 (6h) Salmo salar reference RNA
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