Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(3,705)		   Primates
(37)		   Rodents
(1,748)		   Mammals
(295)		   Vertebrates
(402)		   Invertebrates
(1,004)		   Plants
(2,170)		   Bacteria
(1,636)		   Viruses
(78)		   Phages
(8)		   Unclassified
(399)		   All
(11,528)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(0)		   Tiling Array
(1)		   cDNA Array
(8)		   Oligo Array
(40)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(27)		   Other
(2)		   All
(78)		  
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Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL9950 Illumina Genome Analyzer (Cucumber mosaic virus (strain FNY)) 0 2010-01-20 Cucumber mosaic virus (strain FNY)
Cucumber mosaic virus (strain FNY)		 HT Sequencing high-throughput sequencing, Illumina Genome Analyzer (Cucumber mosaic virus (strain FNY)),
2 GPL9942 HPI-AG KSHV 15k v. 3.0 6,568 Heinrich-Pette-Institut 2010-01-15 Agilent Technologies Human herpesvirus 8
Human herpesvirus 8		 Oligo Array in situ oligonucleotide, HPI-AG KSHV 15k v. 3.0,
3 GPL9687 Plymouth Marine Laboratory CroV Microarray Version 1 4,320 Plymouth Marine Laboratory 2009-11-17 Liverpool Microarray Facility Cafeteria roenbergensis virus BV-PW1
Cafeteria roenbergensis virus BV-PW1		 Oligo Array spotted oligonucleotide, Plymouth Marine Laboratory CroV Microarray Version 1, Cafeteria roenbergensis virus CroV
4 GPL9540 454 GS FLX (Hepatitis C virus) 0 2009-11-06 Hepatitis C virus
Hepatitis C virus		 HT Sequencing high-throughput sequencing, 454 GS FLX (Hepatitis C virus),
5 GPL9422 454 GS (Cymbidium ringspot virus) 0 2009-10-09 Cymbidium ringspot virus
Cymbidium ringspot virus		 HT Sequencing high-throughput sequencing, 454 GS (Cymbidium ringspot virus),
6 GPL9403 Illumina Genome Analyzer II (Youcai mosaic virus) 0 2009-10-08 Youcai mosaic virus
Youcai mosaic virus		 HT Sequencing high-throughput sequencing, Illumina Genome Analyzer II (Youcai mosaic virus),
7 GPL9402 Illumina Genome Analyzer (Flock house virus) 0 2009-10-08 Flock house virus
Flock house virus		 HT Sequencing high-throughput sequencing, Illumina Genome Analyzer (Flock house virus),
8 GPL9390 Illumina Genome Analyzer (Cymbidium ringspot virus) 0 2009-10-07 Cymbidium ringspot virus
Cymbidium ringspot virus		 HT Sequencing high-throughput sequencing, Illumina Genome Analyzer (Cymbidium ringspot virus),
9 GPL9383 454 GS (Turnip mosaic virus) 0 2009-10-07 Turnip mosaic virus
Turnip mosaic virus		 HT Sequencing high-throughput sequencing, 454 GS (Turnip mosaic virus),
10 GPL9382 454 GS (Cocksfoot streak virus) 0 2009-10-07 Cocksfoot streak virus
Cocksfoot streak virus		 HT Sequencing high-throughput sequencing, 454 GS (Cocksfoot streak virus),
11 GPL9376 454 GS FLX (Tomato yellow leaf curl virus) 0 2009-10-07 Tomato yellow leaf curl virus
Tomato yellow leaf curl virus		 HT Sequencing high-throughput sequencing, 454 GS FLX (Tomato yellow leaf curl virus),
12 GPL9375 454 GS FLX (Watermelon mosaic virus) 0 2009-10-07 Watermelon mosaic virus
Watermelon mosaic virus		 HT Sequencing high-throughput sequencing, 454 GS FLX (Watermelon mosaic virus),
13 GPL9374 454 GS FLX (Melon necrotic spot virus) 0 2009-10-07 Melon necrotic spot virus
Melon necrotic spot virus		 HT Sequencing high-throughput sequencing, 454 GS FLX (Melon necrotic spot virus),
14 GPL9373 454 GS FLX (Pepper mild mottle virus) 0 2009-10-07 Pepper mild mottle virus
Pepper mild mottle virus		 HT Sequencing high-throughput sequencing, 454 GS FLX (Pepper mild mottle virus),
15 GPL9372 454 GS FLX (Potato virus X) 0 2009-10-07 Potato virus X
Potato virus X		 HT Sequencing high-throughput sequencing, 454 GS FLX (Potato virus X),
16 GPL9371 454 GS FLX (Cymbidium ringspot virus) 0 2009-10-07 Cymbidium ringspot virus
Cymbidium ringspot virus		 HT Sequencing high-throughput sequencing, 454 GS FLX (Cymbidium ringspot virus),
17 GPL9370 454 GS FLX (Cucumber mosaic virus) 0 2009-10-07 Cucumber mosaic virus
Cucumber mosaic virus		 HT Sequencing high-throughput sequencing, 454 GS FLX (Cucumber mosaic virus),
18 GPL9369 454 GS FLX (Turnip mosaic virus) 0 2009-10-07 Turnip mosaic virus
Turnip mosaic virus		 HT Sequencing high-throughput sequencing, 454 GS FLX (Turnip mosaic virus),
19 GPL9368 454 GS FLX (Tobacco rattle virus) 0 2009-10-07 Tobacco rattle virus
Tobacco rattle virus		 HT Sequencing high-throughput sequencing, 454 GS FLX (Tobacco rattle virus),
20 GPL9292 Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.2 412 University of Nebraska-Lincoln 2009-09-24 DNA Microarray Core Facility, University of Nebraska Medical Center Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1		 Oligo Array spotted oligonucleotide, Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.2, This chip (v.1.2) is similar to the v.1.0 used for the PBCV-1 time course analysis, however, because of a problem during probe printing a few spots were out of place. This problem forced us to create a new annotation file. Thus, we decided to generate a new platform for it to avoid confusion. Chip v.1.2 was mainly used to the aphidicolin treatment experiments. The Platform data table reflects a condensed representation of the array's replicate features.
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