Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(0)		   Tiling Array
(1)		   cDNA Array
(1)		   Oligo Array
(28)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(21)		   Other
(0)		   All
(51)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 TMV-derived Small RNAs Reveals Role for Arabidopsis thaliana RNA-dependent RNA Polymerases in Viral siRNA Biogenesis (GSE12918) [HT Sequencing] Illumina Genome Analyzer II (Youcai mosaic virus) (GPL9403) texas tech university 2008-09-24 Youcai mosaic virus
Youcai mosaic virus		 4
(0 x 4) 		4 by_platform
by_series
2 High-throughput pyrosequencing of plant virus small RNAs (GSE16996) [HT Sequencing] 454 GS FLX (Watermelon mosaic virus) (GPL9375) Technische Universität München 2009-07-08 Watermelon mosaic virus
Watermelon mosaic virus		 1
(0 x 1) 		1 by_platform
by_series
3 Pediatric RTIs (GSE10294) [Oligo Array] Viro3 (GPL3429) University of California, San Francisco 2008-01-28 Viruses
Viruses		 6,084,864
(21,888 x 278) 		263 1 14 by_platform
by_series
4 Viral Detection Microarray Analysis of Unknown Tropical Febrile Illness Cases (GSE28142) [Oligo Array] Viro5 (GPL13323) University of California San Francisco 2011-03-23 Viruses
Viruses		 2,676,888
(17,496 x 153) 		153 by_platform
by_series
5 Optimization and Clinical Validation of a Pathogen Detection Microarray (GSE7779) [Tiling Array] NimbleGen pathogenic virus whole-genome tiling array_Patharray2 (GPL5159) Genome Institute of Singapore 2007-05-11 Viruses
Viruses		 2,164,680
(54,117 x 40) 		40 by_platform
by_series
6 IPF AEx Series (GSE27578) [Oligo Array] Viro3 (GPL3429) UC Berkeley and UC San Francisco 2011-02-28 Viruses
Viruses		 1,816,704
(21,888 x 83) 		83 by_platform
by_series
7 E-Predict Training Data Set and Examples (GSE2228) [Oligo Array] MegaViroP1-P7 (GPL1834) University of California, San Francisco 2005-02-02 Viruses
Viruses		 700,224
(12,504 x 56) 		1 33 22 by_platform
by_series
8 NATURI V1 Nasal Lavage - Viro3 (GSE7301) [Oligo Array] Viro3 (GPL3429) UCSF 2007-03-16 Viruses
Viruses		 656,640
(21,888 x 30) 		30 by_platform
by_series
9 Pan-viral screening of respiratory tract infections in asthmatic and non-asthmatic adults (GSE8053) [Oligo Array] Viro3 (GPL3429) UCSF 2007-06-07 Viruses
Viruses		 656,640
(21,888 x 30) 		30 by_platform
by_series
10 NATURI V1 Nasal Lavage - MegaViro (GSE8029) [Oligo Array] MegaViroP1-P7 (GPL1834) UCSF 2007-06-05 Viruses
Viruses		 650,208
(12,504 x 52) 		52 by_platform
by_series
11 Pan-viral screening of respiratory tract infections in asthmatic and non-asthmatic adults (GSE8053) [Oligo Array] MegaViroP1-P7 (GPL1834) UCSF 2007-06-07 Viruses
Viruses		 650,208
(12,504 x 52) 		52 by_platform
by_series
12 Identification of Xenotropic MuLV-related virus (GSE3607) [Oligo Array] MegaViroP1-P7 (GPL1834) University of California, San Francisco 2005-11-14 Viruses
Viruses		 250,080
(12,504 x 20) 		1 19 by_platform
by_series
13 Detection of Human Viruses from wastewater sewage extracts (GSE11195) [Oligo Array] MSU_Rose_Env_Vir_v3 (GPL6501) Rose_Lab@MSU 2008-04-16 Viruses
Viruses		 141,024
(10,848 x 13) 		13 by_platform
by_series
14 Human respiratory and stool specimens used to detect cardioviruses (GSE11569) [Oligo Array] Viro4 (GPL6862) University of California, San Francisco 2008-05-27 Viruses
Viruses		 94,656
(15,776 x 6) 		6 by_platform
by_series
15 Human respiratory and stool specimens used to detect cardioviruses (GSE11569) [Oligo Array] Viro3 (GPL3429) University of California, San Francisco 2008-05-27 Viruses
Viruses		 65,664
(21,888 x 3) 		3 by_platform
by_series
16 Series1 (GSE4191) [Oligo Array] Viro3 (GPL3429) University of California, San Francisco 2006-02-07 Viruses
Viruses		 21,888
(21,888 x 1) 		1 by_platform
by_series
17 Human metapneumovirus strain associated with critical respiratory illness in an elderly male with leukemia Stanford HMPV (GSE6214) [Oligo Array] Viro3 (GPL3429) University of California, San Francisco 2006-11-01 Viruses
Viruses		 21,888
(21,888 x 1) 		1 by_platform
by_series
18 siRNAs 15-29 nucleotides long with 100 percent hit to Turnip mosaic virus clone GBR98 (GSE12053) [HT Sequencing] 454 GS (Turnip mosaic virus) (GPL9383) CEH Oxford 2008-07-09 Turnip mosaic virus
Turnip mosaic virus		 1
(0 x 1) 		1 by_platform
by_series
19 High-throughput pyrosequencing of plant virus small RNAs (GSE16996) [HT Sequencing] 454 GS FLX (Turnip mosaic virus) (GPL9369) Technische Universität München 2009-07-08 Turnip mosaic virus
Turnip mosaic virus		 1
(0 x 1) 		1 by_platform
by_series
20 High-throughput pyrosequencing of plant virus small RNAs (GSE16996) [HT Sequencing] 454 GS FLX (Tomato yellow leaf curl virus) (GPL9376) Technische Universität München 2009-07-08 Tomato yellow leaf curl virus
Tomato yellow leaf curl virus		 1
(0 x 1) 		1 by_platform
by_series
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