Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(0)
  Tiling Array
(2)
  cDNA Array
(1)
  Oligo Array
(30)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(26)
  Other
(0)
  All
(59)
 
1   |   2   |   3      »      
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Characterization of small interfering RNAs derived from the geminivirus/betasatellite complex using deep sequencing (GSE26368) [HT Sequencing] Illumina Genome Analyzer (Tomato yellow leaf curl China virus) (GPL11369) Zhejiang University 2010-12-30 Tomato yellow leaf curl China virus
Tomato yellow leaf curl China virus
5
(0 x 5)
5 by_platform
by_series
2 Population of viral small RNAs expressed in common marmoset (Callithrix jacchus) T cells latently infected with Herpesvirus saimiri (strain A11) (GSE31065) [HT Sequencing] Illumina Genome Analyzer II (Herpesvirus saimiri (strain 11)) (GPL14002) Yale University 2011-07-30 Herpesvirus saimiri (strain 11)
Herpesvirus saimiri (strain 11)
1
(0 x 1)
1 by_platform
by_series
3 Nucleosome maps of the human cytomegalovirus genome reveal a temporal switch in chromatin organization linked to a major IE protein (GSE48875) [Tiling Array] NimbleGen-hCMV-4X72K tiling array [090115_CMV_ES_ChIP] (GPL17446) Weizmann Institute of Science 2013-07-15 Human herpesvirus 5
Human herpesvirus 5
2,149,092
(65,124 x 33)
32 1 by_platform
by_series
4 Tiled Array Experiments Determining RNA Expression in gHV68 infected 3T12 cells (GSE21500) [Oligo Array] WashU-Virgin gHV68 44k v1.0 (GPL10356) Washington University-School of Medicine 2010-04-23 Murid herpesvirus 4
Murid herpesvirus 4
510,300
(42,525 x 12)
12 by_platform
by_series
5 VIPR: A probabilistic algorithm for analysis of microbial detection microarrays (GSE21407) [cDNA Array] Hemorrhagic Fever Microarray Release I (V2.10HF) (GPL10345) Washington University in St. Louis, School of Medicine 2010-04-20 Dengue virus 1
Dengue virus 1
1,635,040
(14,864 x 110)
2 108 by_platform
by_series
6 VLA lyssavirus genotyping dataset (GSE14705) [Oligo Array] AH/VLA Virus Detection Array LP1 1.6K (GPL8066) Veterinary Laboratories Agency 2009-02-04 Rabies virus
Rabies virus
22,400
(1,600 x 14)
13 1 by_platform
by_series
7 Comparative genome sequencing of wild type rhesus cytomegalovirus (RhCMV) with a recombinant RhCMV lacking ORF 178 (GSE20308) [Oligo Array] Rhesus cytomegalovirus 68-1 platform (GPL10002) Vaccine and Gene Therapy Institute 2010-02-12 Macacine herpesvirus 3
Macacine herpesvirus 3
94,899
(31,633 x 3)
3 by_platform
by_series
8 Expression of EBV miRNAs in numerous EBV-positive cell lines (GSE12014) [Oligo Array] Sugden Lab Epstein-Barr virus (EBV) miRNA microarray (GPL7022) University of Wisconsin-Madison 2008-07-06 Human herpesvirus 4
Human herpesvirus 4
1,872
(39 x 48)
45 1 1 1 by_platform
by_series
9 Microarray analysis of Chlorella Virus PBCV-1 Transcription during the viral lifecycle (GSE18421) [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.0 (GPL9291) University of Nebraska-Lincoln 2009-10-06 Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
33,600
(400 x 84)
84 by_platform
by_series
10 Microarray analysis of Chlorella Virus PBCV-1 Transcription during the viral lifecycle (GSE18421) [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.2 (GPL9292) University of Nebraska-Lincoln 2009-10-06 Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
5,768
(412 x 14)
14 by_platform
by_series
11 DNA microarray analysis of CfMNPV genes (GSE14747) [Oligo Array] University of Guelph, 1152 CfMNPV genes array version 1 (GPL8039) University of Guelph 2009-02-06 Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
3,410
(310 x 11)
11 by_platform
by_series
12 Transcriptional analysis of select CfMNPV genes and some antisense transcripts by an oligonucleotide microarray (GSE4783) [Oligo Array] Yang et. al. Oligoarray of CfMNPV select ORFs (GPL3719) University of Guelph 2006-05-05 Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
2,688
(192 x 14)
14 by_platform
by_series
13 Ribonuclease L and Metal-Ion-Independent Endoribonuclease Cleavage Sites in Host and Viral RNAs (GSE52489) [HT Sequencing] Illumina MiSeq (Hepatitis C virus subtype 1a) (GPL17948) University of Colorado 2013-11-19 Hepatitis C virus subtype 1a
Hepatitis C virus subtype 1a
12
(0 x 12)
12 by_platform
by_series
14 Ribonuclease L and Metal-Ion-Independent Endoribonuclease Cleavage Sites in Host and Viral RNAs (GSE52489) [HT Sequencing] Illumina MiSeq (Human poliovirus 1) (GPL17950) University of Colorado 2013-11-19 Human poliovirus 1
Human poliovirus 1
6
(0 x 6)
6 by_platform
by_series
15 Ribonuclease L and Metal-Ion-Independent Endoribonuclease Cleavage Sites in Host and Viral RNAs (GSE52489) [HT Sequencing] Illumina Genome Analyzer IIx (Human poliovirus 1) (GPL17949) University of Colorado 2013-11-19 Human poliovirus 1
Human poliovirus 1
5
(0 x 5)
5 by_platform
by_series
16 Pediatric RTIs (GSE10294) [Oligo Array] Viro3 (GPL3429) University of California, San Francisco 2008-01-28 Viruses
Viruses
6,084,864
(21,888 x 278)
263 1 14 by_platform
by_series
17 E-Predict Training Data Set and Examples (GSE2228) [Oligo Array] MegaViroP1-P7 (GPL1834) University of California, San Francisco 2005-02-02 Viruses
Viruses
700,224
(12,504 x 56)
1 33 22 by_platform
by_series
18 Identification of Xenotropic MuLV-related virus (GSE3607) [Oligo Array] MegaViroP1-P7 (GPL1834) University of California, San Francisco 2005-11-14 Viruses
Viruses
250,080
(12,504 x 20)
1 19 by_platform
by_series
19 Human respiratory and stool specimens used to detect cardioviruses (GSE11569) [Oligo Array] Viro4 (GPL6862) University of California, San Francisco 2008-05-27 Viruses
Viruses
94,656
(15,776 x 6)
6 by_platform
by_series
20 Human respiratory and stool specimens used to detect cardioviruses (GSE11569) [Oligo Array] Viro3 (GPL3429) University of California, San Francisco 2008-05-27 Viruses
Viruses
65,664
(21,888 x 3)
3 by_platform
by_series
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