Gene Expression Omnibus (GEO) Overview Version:2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,392)
  Primates
(665)
  Rodents
(7,771)
  Mammals
(399)
  Vertebrates
(719)
  Invertebrates
(1,567)
  Plants
(3,435)
  Bacteria
(998)
  Viruses
(14)
  Phages
(0)
  Unclassified
(76)
  All
(33,056)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(0)
  Tiling Array
(0)
  cDNA Array
(0)
  Oligo Array
(14)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(14)
 
  brain
(0)
  blood
(0)
  connective
(0)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(14)
  all
(14)
 
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM397877 BPMV 345 Chinese Academy of Inspection and Quarantine 2009-04-27 [Oligo Array] Plant virus detection microarray (GPL8484) RNA Bean pod mottle virus
Bean pod mottle virus
unclassified source_name:Bean pod mottle virus sample extracted from Glycine max title:BPMV description:Bean pod mottle virus sample extracted from Glycine max
2 GSM397878 SBMV 345 Chinese Academy of Inspection and Quarantine 2009-04-27 [Oligo Array] Plant virus detection microarray (GPL8484) RNA Southern bean mosaic virus
Southern bean mosaic virus
unclassified source_name:Southern bean mosaic virus sample extracted from Phaseolus vulgaris title:SBMV description:Southern bean mosaic virus sample extracted from Phaseolus vulgaris
3 GSM397879 ArMV 345 Chinese Academy of Inspection and Quarantine 2009-04-27 [Oligo Array] Plant virus detection microarray (GPL8484) RNA Arabis mosaic virus
Arabis mosaic virus
unclassified source_name:Arabis mosaic virus sample extracted from Chenopodiun amaranticolor title:ArMV description:Arabis mosaic virus sample extracted from Chenopodiun amaranticolor
4 GSM397880 TMV 345 Chinese Academy of Inspection and Quarantine 2009-04-27 [Oligo Array] Plant virus detection microarray (GPL8484) RNA Tobacco mosaic virus
Tobacco mosaic virus
unclassified source_name:Tobacco mosaic virus sample extracted from Nicotiana tabacum title:TMV description:Tobacco mosaic virus sample extracted from Nicotiana tabacum
5 GSM397881 PPV 345 Chinese Academy of Inspection and Quarantine 2009-04-27 [Oligo Array] Plant virus detection microarray (GPL8484) RNA Plum pox virus
Plum pox virus
unclassified source_name:Plum pox virus sample extracted from Chenopodium quinoa title:PPV description:Plum pox virus sample extracted from Chenopodium quinoa
6 GSM397882 ToRSV 345 Chinese Academy of Inspection and Quarantine 2009-04-27 [Oligo Array] Plant virus detection microarray (GPL8484) RNA Tomato ringspot virus
Tomato ringspot virus
unclassified source_name:Tomato ringspot virus sample extracted from Tetragonia expansa title:ToRSV description:Tomato ringspot virus sample extracted from Tetragonia expansa
7 GSM397883 PNRSV 345 Chinese Academy of Inspection and Quarantine 2009-04-27 [Oligo Array] Plant virus detection microarray (GPL8484) RNA Prunus necrotic ringspot virus
Prunus necrotic ringspot virus
unclassified source_name:Prunus necrotic ringspot virus sample extracted from Cucumis sativus title:PNRSV description:Prunus necrotic ringspot virus sample extracted from Cucumis sativus
8 GSM397887 PVX 345 Chinese Academy of Inspection and Quarantine 2009-04-27 [Oligo Array] Plant virus detection microarray (GPL8484) RNA Potato virus X
Potato virus X
unclassified source_name:Potato virus X sample extracted from Chenopodium quinoa title:PVX description:Potato virus X sample extracted from Chenopodium quinoa
9 GSM397888 TSWV 345 Chinese Academy of Inspection and Quarantine 2009-04-27 [Oligo Array] Plant virus detection microarray (GPL8484) RNA Tomato spotted wilt virus
Tomato spotted wilt virus
unclassified source_name:Tomato spotted wilt virus sample extracted from Datura stramonium title:TSWV description:Tomato spotted wilt virus sample extracted from Datura stramonium
10 GSM397889 TRSV 345 Chinese Academy of Inspection and Quarantine 2009-04-27 [Oligo Array] Plant virus detection microarray (GPL8484) RNA Tobacco ringspot virus
Tobacco ringspot virus
unclassified source_name:Tobacco ringspot virus sample extracted from Nicotiana tabacum title:TRSV description:Tobacco ringspot virus sample extracted from Nicotiana tabacum
11 GSM397890 PVX_100 345 Chinese Academy of Inspection and Quarantine 2009-04-27 [Oligo Array] Plant virus detection microarray (GPL8484) RNA Potato virus X
Potato virus X
unclassified source_name:Potato virus X sample extracted from Chenopodium quinoa. RNA was diluted by 100 times before microarray hybridization. title:PVX_100 description:Potato virus X sample extracted from Chenopodium quinoa. RNA was diluted by 100 times before microarray hybridization.
12 GSM397891 PVX_10 345 Chinese Academy of Inspection and Quarantine 2009-04-27 [Oligo Array] Plant virus detection microarray (GPL8484) RNA Potato virus X
Potato virus X
unclassified source_name:Potato virus X sample extracted from Chenopodium quinoa. RNA was diluted by 10 times before microarray hybridization. title:PVX_10 description:Potato virus X sample extracted from Chenopodium quinoa. RNA was diluted by 10 times before microarray hybridization.
13 GSM397892 TSWV_PrimerD 345 Chinese Academy of Inspection and Quarantine 2009-04-27 [Oligo Array] Plant virus detection microarray (GPL8484) RNA Tomato spotted wilt virus
Tomato spotted wilt virus
unclassified source_name:Tomato spotted wilt virus sample extracted from Datura stramonium. PrimerD was used to reversely transcribe the RNA. The product was labeled by Klenow polymerase with Cy3-CTP. title:TSWV_PrimerD description:Tomato spotted wilt virus sample extracted from Datura stramonium. PrimerD was used to reversely transcribe the RNA. The product was labeled by Klenow polymerase with Cy3-CTP.
14 GSM397893 TSWV_PrimerD_sequanase 345 Chinese Academy of Inspection and Quarantine 2009-04-27 [Oligo Array] Plant virus detection microarray (GPL8484) RNA Tomato spotted wilt virus
Tomato spotted wilt virus
unclassified source_name:Tomato spotted wilt virus sample extracted from Datura stramonium. Reversely transcribed the RNA with PrimerD and synthesized the second strand with Sequenase. The product was labeled by Klenow polymerase with Cy3-CTP. title:TSWV_PrimerD_sequanase description:Tomato spotted wilt virus sample extracted from Datura stramonium. Reversely transcribed the RNA with PrimerD and synthesized the second strand with Sequenase. The product was labeled by Klenow polymerase with Cy3-CTP.