Gene Expression Omnibus (GEO) Overview

DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Viruses
(1,263)

Phages
(101)

Unclassified
(5,497)

All
(931,947)

SAGE NlaIII
(0)

SAGE RsaI
(0)

SAGE Sau3A
(0)

MPSS
(0)

GeneChip
(0)

Tiling Array
(40)

cDNA Array
(102)

Oligo Array
(1,054)

Bead Array
(0)

Protein Array
(0)

Antibody
(0)

RT-PCR
(0)

HT-Seq
(67)

Other
(0)

All
(1,263)

brain
(12)

blood
(274)

connective
(420)

reproductive
(0)

muscular
(0)

digestive
(1)

liver
(0)

lung
(28)

urinary
(0)

endo/exo-crine
(0)

embryo
(0)

adult aerial structure
(0)

young aerial structure
(0)

root
(0)

meristem/growing tissue
(0)

flower/sexual organ
(0)

seed/fruit/grain
(0)

pooled
(1)

unclassified
(527)

all
(1,263)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM1020234	Footprints from cells infected with HCMV for 5hr, pretreated with cycloheximide	0	UCSF	2012-10-16	[HT Sequencing] Illumina Genome Analyzer II (Human herpesvirus 5) (GPL16185)	SRA	Human herpesvirus 5	skin	Human fibroblasts infected with HCMV, cycloheximide, 5hr
2	GSM1020235	Footprints from cells infected with HCMV for 24hr, pretreated with cycloheximide	0	UCSF	2012-10-16	[HT Sequencing] Illumina Genome Analyzer II (Human herpesvirus 5) (GPL16185)	SRA	Human herpesvirus 5	skin	Human fibroblasts infected with HCMV, cycloheximide, 24hr
3	GSM1020236	Footprints from cells infected with HCMV for 72hr, pretreated with cycloheximide	0	UCSF	2012-10-16	[HT Sequencing] Illumina Genome Analyzer II (Human herpesvirus 5) (GPL16185)	SRA	Human herpesvirus 5	skin	Human fibroblasts infected with HCMV, cycloheximide, 72hr
4	GSM1020237	Footprints from cells infected with HCMV for 72hr, pretreated with cycloheximide, replicate	0	UCSF	2012-10-16	[HT Sequencing] Illumina HiSeq 2000 (Human herpesvirus 5) (GPL16186)	SRA	Human herpesvirus 5	skin	Human fibroblasts infected with HCMV, cycloheximide, 72hr
5	GSM1020238	Footprints from cells infected with HCMV for 5hr, pretreated with Harringtonine	0	UCSF	2012-10-16	[HT Sequencing] Illumina Genome Analyzer II (Human herpesvirus 5) (GPL16185)	SRA	Human herpesvirus 5	skin	Human fibroblasts infected with HCMV, Harringtonine, 5hr
6	GSM1020239	Footprints from cells infected with HCMV for 72hr, pretreated with Harringtonine	0	UCSF	2012-10-16	[HT Sequencing] Illumina Genome Analyzer II (Human herpesvirus 5) (GPL16185)	SRA	Human herpesvirus 5	skin	Human fibroblasts infected with HCMV, Harringtonine, 72hr
7	GSM1020240	Footprints from cells infected with HCMV for 5hr, pretreated with LTM	0	UCSF	2012-10-16	[HT Sequencing] Illumina HiSeq 2000 (Human herpesvirus 5) (GPL16186)	SRA	Human herpesvirus 5	skin	Human fibroblasts infected with HCMV, LTM, 5hr
8	GSM1020241	Footprints from cells infected with HCMV for 72hr, pretreated with LTM	0	UCSF	2012-10-16	[HT Sequencing] Illumina HiSeq 2000 (Human herpesvirus 5) (GPL16186)	SRA	Human herpesvirus 5	skin	Human fibroblasts infected with HCMV, LTM, 72hr
9	GSM1020242	Footprints from cells infected with HCMV for 5hr, no drug pretreatment	0	UCSF	2012-10-16	[HT Sequencing] Illumina Genome Analyzer II (Human herpesvirus 5) (GPL16185)	SRA	Human herpesvirus 5	skin	Human fibroblasts infected with HCMV, none, 5hr
10	GSM1020243	Footprints from cells infected with HCMV for 72hr, no drug pretreatment	0	UCSF	2012-10-16	[HT Sequencing] Illumina Genome Analyzer II (Human herpesvirus 5) (GPL16185)	SRA	Human herpesvirus 5	skin	Human fibroblasts infected with HCMV, none, 72hr
11	GSM1020244	mRNA-seq from cells infected with HCMV for 5hr	0	UCSF	2012-10-16	[HT Sequencing] Illumina Genome Analyzer II (Human herpesvirus 5) (GPL16185)	SRA	Human herpesvirus 5	skin	Human fibroblasts infected with HCMV, 5hr
12	GSM1020245	mRNA-seq from cells infected with HCMV for 24hr	0	UCSF	2012-10-16	[HT Sequencing] Illumina Genome Analyzer II (Human herpesvirus 5) (GPL16185)	SRA	Human herpesvirus 5	skin	Human fibroblasts infected with HCMV, 24hr
13	GSM1020246	mRNA-seq from cells infected with HCMV for 72hr	0	UCSF	2012-10-16	[HT Sequencing] Illumina Genome Analyzer II (Human herpesvirus 5) (GPL16185)	SRA	Human herpesvirus 5	skin	Human fibroblasts infected with HCMV, 72hr
14	GSM1020247	mRNA-seq from cells infected with HCMV for 5hr, replicate	0	UCSF	2012-10-16	[HT Sequencing] Illumina Genome Analyzer II (Human herpesvirus 5) (GPL16185)	SRA	Human herpesvirus 5	skin	Human fibroblasts infected with HCMV, 5hr
15	GSM1020248	mRNA-seq from cells infected with HCMV for 24hr, replicate	0	UCSF	2012-10-16	[HT Sequencing] Illumina HiSeq 2000 (Human herpesvirus 5) (GPL16186)	SRA	Human herpesvirus 5	skin	Human fibroblasts infected with HCMV, 24hr
16	GSM1020249	mRNA-seq from cells infected with HCMV for 72hr, replicate	0	UCSF	2012-10-16	[HT Sequencing] Illumina HiSeq 2000 (Human herpesvirus 5) (GPL16186)	SRA	Human herpesvirus 5	skin	Human fibroblasts infected with HCMV, 72hr
17	GSM1006709	S2-mock	0	CNRS	2012-09-19	[HT Sequencing] Illumina HiSeq 2000 (Invertebrate iridescent virus 6) (GPL16081)	SRA	Invertebrate iridescent virus 6	unclassified	source_name:Drosophila S2 cells title:S2-mock description:non infected Drosophila S2 cells
18	GSM1006710	S2-IIV6	0	CNRS	2012-09-19	[HT Sequencing] Illumina HiSeq 2000 (Invertebrate iridescent virus 6) (GPL16081)	SRA	Invertebrate iridescent virus 6	unclassified	source_name:Drosophila S2 cells title:S2-IIV6 description:IIV6 infected Drosophila S2 cells
19	GSM1006711	yw-IIV6	0	CNRS	2012-09-19	[HT Sequencing] Illumina HiSeq 2000 (Invertebrate iridescent virus 6) (GPL16081)	SRA	Invertebrate iridescent virus 6	unclassified	source_name:Adult flies title:yw-IIV6 description:IIV6 infected Drosophila adult flies
20	GSM1006712	Dcr2[R416X]-IIV6	0	CNRS	2012-09-19	[HT Sequencing] Illumina HiSeq 2000 (Invertebrate iridescent virus 6) (GPL16081)	SRA	Invertebrate iridescent virus 6	unclassified	source_name:Adult flies title:Dcr2[R416X]-IIV6 description:IIV6 infected Drosophila adult Dcr2 mutant flies

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