Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)
  Primates
(4,928)
  Rodents
(181,106)
  Mammals
(16,260)
  Vertebrates
(18,263)
  Invertebrates
(37,338)
  Plants
(91,454)
  Bacteria
(39,082)
  Viruses
(1,266)
  Phages
(101)
  Unclassified
(5,242)
  All
(898,944)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(0)
  Tiling Array
(40)
  cDNA Array
(102)
  Oligo Array
(1,057)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(67)
  Other
(0)
  All
(1,266)
 
  brain
(12)
  blood
(274)
  connective
(420)
  reproductive
(0)
  muscular
(0)
  digestive
(1)
  liver
(0)
  lung
(28)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(1)
  unclassified
(530)
  all
(1,266)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM107978 Expression of CfMNPV select ORFs, 0 hpi, Expt. 1 192 University of Guelph 2006-05-04 [Oligo Array] Yang et. al. Oligoarray of CfMNPV select ORFs (GPL3719) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:Cy5-labeled viral genomic DNA Cy3-labeled cDNA title:Expression of CfMNPV select ORFs, 0 hpi, Expt. 1 description:Oligonucleotide-based two-channel DNA microarray was used for characterization of temporal gene expression profiles of select CfMNPV genes representing all four temporal classes. We adapted the DNA normalization protocol using CfMNPV vgDNA as a reference with microarray chips containing oligonucleotide probes for 23 select CfMNPV ORFs and their complements.
2 GSM108049 Expression of CfMNPV select ORFs, 3 hpi, Expt. 1 192 University of Guelph 2006-05-05 [Oligo Array] Yang et. al. Oligoarray of CfMNPV select ORFs (GPL3719) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:Cy5-labeled viral genomic DNA Cy3-labeled cDNA title:Expression of CfMNPV select ORFs, 3 hpi, Expt. 1 description:Oligonucleotide-based two-channel DNA microarray was used for characterization of temporal gene expression profiles of select CfMNPV genes representing all four temporal classes. We adapted the DNA normalization protocol using CfMNPV vgDNA as a reference with microarray chips containing oligonucleotide probes for 23 select CfMNPV ORFs and their complements.
3 GSM108050 Expression of CfMNPV select ORFs, 6 hpi, Expt. 1 192 University of Guelph 2006-05-05 [Oligo Array] Yang et. al. Oligoarray of CfMNPV select ORFs (GPL3719) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:Cy5-labeled viral genomic DNA Cy3-labeled cDNA title:Expression of CfMNPV select ORFs, 6 hpi, Expt. 1 description:Oligonucleotide-based two-channel DNA microarray was used for characterization of temporal gene expression profiles of select CfMNPV genes representing all four temporal classes. We adapted the DNA normalization protocol using CfMNPV vgDNA as a reference with microarray chips containing oligonucleotide probes for 23 select CfMNPV ORFs and their complements.
4 GSM108053 Expression of CfMNPV select ORFs, 12 hpi, Expt. 1 192 University of Guelph 2006-05-05 [Oligo Array] Yang et. al. Oligoarray of CfMNPV select ORFs (GPL3719) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:Cy5-labeled viral genomic DNA Cy3-labeled cDNA title:Expression of CfMNPV select ORFs, 12 hpi, Expt. 1 description:Oligonucleotide-based two-channel DNA microarray was used for characterization of temporal gene expression profiles of select CfMNPV genes representing all four temporal classes. We adapted the DNA normalization protocol using CfMNPV vgDNA as a reference with microarray chips containing oligonucleotide probes for 23 select CfMNPV ORFs and their complements.
5 GSM108056 Expression of CfMNPV select ORFs, 24hpi, Expt. 1 192 University of Guelph 2006-05-05 [Oligo Array] Yang et. al. Oligoarray of CfMNPV select ORFs (GPL3719) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:Cy5-labeled viral genomic DNA Cy3-labeled cDNA title:Expression of CfMNPV select ORFs, 24hpi, Expt. 1 description:Oligonucleotide-based two-channel DNA microarray was used for characterization of temporal gene expression profiles of select CfMNPV genes representing all four temporal classes. We adapted the DNA normalization protocol using CfMNPV vgDNA as a reference with microarray chips containing oligonucleotide probes for 23 select CfMNPV ORFs and their complements.
6 GSM108057 Expression of CfMNPV select ORFs, 48hpi, Expt. 1 192 University of Guelph 2006-05-05 [Oligo Array] Yang et. al. Oligoarray of CfMNPV select ORFs (GPL3719) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:Cy5-labeled viral genomic DNA Cy3-labeled cDNA title:Expression of CfMNPV select ORFs, 48hpi, Expt. 1 description:Oligonucleotide-based two-channel DNA microarray was used for characterization of temporal gene expression profiles of select CfMNPV genes representing all four temporal classes. We adapted the DNA normalization protocol using CfMNPV vgDNA as a reference with microarray chips containing oligonucleotide probes for 23 select CfMNPV ORFs and their complements.
7 GSM108061 Expression of CfMNPV select ORFs, 0 hpi, Expt. 2 192 University of Guelph 2006-05-05 [Oligo Array] Yang et. al. Oligoarray of CfMNPV select ORFs (GPL3719) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:Cy5-labeled viral genomic DNA Cy3-labeled cDNA title:Expression of CfMNPV select ORFs, 0 hpi, Expt. 2 description:Oligonucleotide-based two-channel DNA microarray was used for characterization of temporal gene expression profiles of select CfMNPV genes representing all four temporal classes. We adapted the DNA normalization protocol using CfMNPV vgDNA as a reference with microarray chips containing oligonucleotide probes for 23 select CfMNPV ORFs and their complements.
8 GSM108062 Expression of CfMNPV select ORFs, 3 hpi, Expt. 2 192 University of Guelph 2006-05-05 [Oligo Array] Yang et. al. Oligoarray of CfMNPV select ORFs (GPL3719) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:Cy5-labeled viral genomic DNA Cy3-labeled cDNA title:Expression of CfMNPV select ORFs, 3 hpi, Expt. 2 description:Oligonucleotide-based two-channel DNA microarray was used for characterization of temporal gene expression profiles of select CfMNPV genes representing all four temporal classes. We adapted the DNA normalization protocol using CfMNPV vgDNA as a reference with microarray chips containing oligonucleotide probes for 23 select CfMNPV ORFs and their complements.
9 GSM108063 Expression of CfMNPV select ORFs, 6 hpi, Expt. 2 192 University of Guelph 2006-05-05 [Oligo Array] Yang et. al. Oligoarray of CfMNPV select ORFs (GPL3719) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:Cy5-labeled viral genomic DNA Cy3-labeled cDNA title:Expression of CfMNPV select ORFs, 6 hpi, Expt. 2 description:Oligonucleotide-based two-channel DNA microarray was used for characterization of temporal gene expression profiles of select CfMNPV genes representing all four temporal classes. We adapted the DNA normalization protocol using CfMNPV vgDNA as a reference with microarray chips containing oligonucleotide probes for 23 select CfMNPV ORFs and their complements.
10 GSM108064 Expression of CfMNPV select ORFs, 12 hpi, Expt. 2 192 University of Guelph 2006-05-05 [Oligo Array] Yang et. al. Oligoarray of CfMNPV select ORFs (GPL3719) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:Cy5-labeled viral genomic DNA Cy3-labeled cDNA title:Expression of CfMNPV select ORFs, 12 hpi, Expt. 2 description:Oligonucleotide-based two-channel DNA microarray was used for characterization of temporal gene expression profiles of select CfMNPV genes representing all four temporal classes. We adapted the DNA normalization protocol using CfMNPV vgDNA as a reference with microarray chips containing oligonucleotide probes for 23 select CfMNPV ORFs and their complements.
11 GSM108065 Expression of CfMNPV select ORFs, 24hpi, Expt. 2 192 University of Guelph 2006-05-05 [Oligo Array] Yang et. al. Oligoarray of CfMNPV select ORFs (GPL3719) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:Cy5-labeled viral genomic DNA Cy3-labeled cDNA title:Expression of CfMNPV select ORFs, 24hpi, Expt. 2 description:Oligonucleotide-based two-channel DNA microarray was used for characterization of temporal gene expression profiles of select CfMNPV genes representing all four temporal classes. We adapted the DNA normalization protocol using CfMNPV vgDNA as a reference with microarray chips containing oligonucleotide probes for 23 select CfMNPV ORFs and their complements.
12 GSM108066 Expression of CfMNPV select ORFs, 48hpi, Expt. 2 192 University of Guelph 2006-05-05 [Oligo Array] Yang et. al. Oligoarray of CfMNPV select ORFs (GPL3719) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:Cy5-labeled viral genomic DNA Cy3-labeled cDNA title:Expression of CfMNPV select ORFs, 48hpi, Expt. 2 description:Oligonucleotide-based two-channel DNA microarray was used for characterization of temporal gene expression profiles of select CfMNPV genes representing all four temporal classes. We adapted the DNA normalization protocol using CfMNPV vgDNA as a reference with microarray chips containing oligonucleotide probes for 23 select CfMNPV ORFs and their complements.
13 GSM537196 3T12-18hpi-Rep1 42,525 Washington University-School of Medicine 2010-04-23 [Oligo Array] WashU-Virgin gHV68 44k v1.0 (GPL10356) RNA Murid herpesvirus 4
Murid herpesvirus 4
unclassified source_name:gHV68-infected 3T12 cells 18hpi Mock-18hpi-Rep1 title:3T12-18hpi-Rep1 description:n/a
14 GSM537197 3T12-18hpi-Rep2 42,525 Washington University-School of Medicine 2010-04-23 [Oligo Array] WashU-Virgin gHV68 44k v1.0 (GPL10356) RNA Murid herpesvirus 4
Murid herpesvirus 4
unclassified source_name:gHV68-infected 3T12 cells 18hpi Mock-18hpi-Rep2 title:3T12-18hpi-Rep2 description:n/a
15 GSM537198 3T12-18hpi-Rep3 42,525 Washington University-School of Medicine 2010-04-23 [Oligo Array] WashU-Virgin gHV68 44k v1.0 (GPL10356) RNA Murid herpesvirus 4
Murid herpesvirus 4
unclassified source_name:gHV68-infected 3T12 cells 18hpi Mock-18hpi-Rep3 title:3T12-18hpi-Rep3 description:n/a
16 GSM537199 3T12-18hpi-CID-Rep1 42,525 Washington University-School of Medicine 2010-04-23 [Oligo Array] WashU-Virgin gHV68 44k v1.0 (GPL10356) RNA Murid herpesvirus 4
Murid herpesvirus 4
unclassified source_name:gHV68-infected 3T12 cells 18hpi + cidofovir Mock-18hpi-CID-Rep1 title:3T12-18hpi-CID-Rep1 description:n/a
17 GSM537200 3T12-18hpi-CID-Rep2 42,525 Washington University-School of Medicine 2010-04-23 [Oligo Array] WashU-Virgin gHV68 44k v1.0 (GPL10356) RNA Murid herpesvirus 4
Murid herpesvirus 4
unclassified source_name:gHV68-infected 3T12 cells 18hpi + cidofovir Mock-18hpi-CID-Rep2 title:3T12-18hpi-CID-Rep2 description:n/a
18 GSM537201 3T12-18hpi-CID-Rep3 42,525 Washington University-School of Medicine 2010-04-23 [Oligo Array] WashU-Virgin gHV68 44k v1.0 (GPL10356) RNA Murid herpesvirus 4
Murid herpesvirus 4
unclassified source_name:gHV68-infected 3T12 cells 18hpi + cidofovir Mock-18hpi-CID-Rep3 title:3T12-18hpi-CID-Rep3 description:n/a
19 GSM537202 3T12-8hpi-Rep1 42,525 Washington University-School of Medicine 2010-04-23 [Oligo Array] WashU-Virgin gHV68 44k v1.0 (GPL10356) RNA Murid herpesvirus 4
Murid herpesvirus 4
unclassified source_name:gHV68-infected 3T12 cells 8hpi Mock-8hpi-Rep1 title:3T12-8hpi-Rep1 description:n/a
20 GSM537203 3T12-8hpi-Rep2 42,525 Washington University-School of Medicine 2010-04-23 [Oligo Array] WashU-Virgin gHV68 44k v1.0 (GPL10356) RNA Murid herpesvirus 4
Murid herpesvirus 4
unclassified source_name:gHV68-infected 3T12 cells 8hpi Mock-8hpi-Rep2 title:3T12-8hpi-Rep2 description:n/a
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