Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)
  Primates
(4,928)
  Rodents
(181,106)
  Mammals
(16,260)
  Vertebrates
(18,263)
  Invertebrates
(37,338)
  Plants
(91,454)
  Bacteria
(39,082)
  Viruses
(1,266)
  Phages
(101)
  Unclassified
(5,242)
  All
(898,944)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(0)
  Tiling Array
(40)
  cDNA Array
(102)
  Oligo Array
(1,057)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(67)
  Other
(0)
  All
(1,266)
 
  brain
(12)
  blood
(274)
  connective
(420)
  reproductive
(0)
  muscular
(0)
  digestive
(1)
  liver
(0)
  lung
(28)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(1)
  unclassified
(530)
  all
(1,266)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM534939 Amapari virus-451 14,864 Washington University in St. Louis, School of Medicine 2010-04-20 [cDNA Array] Hemorrhagic Fever Microarray Release I (V2.10HF) (GPL10345) RNA Amapari virus
Amapari virus
unclassified source_name:infected culture title:Amapari virus-451 description:hybridization of infected culture for use in testing the performance of VIPR
2 GSM534946 Amapari virus-473 14,864 Washington University in St. Louis, School of Medicine 2010-04-20 [cDNA Array] Hemorrhagic Fever Microarray Release I (V2.10HF) (GPL10345) RNA Amapari virus
Amapari virus
unclassified source_name:infected culture title:Amapari virus-473 description:hybridization of infected culture for use in testing the performance of VIPR
3 GSM397879 ArMV 345 Chinese Academy of Inspection and Quarantine 2009-04-27 [Oligo Array] Plant virus detection microarray (GPL8484) RNA Arabis mosaic virus
Arabis mosaic virus
unclassified source_name:Arabis mosaic virus sample extracted from Chenopodiun amaranticolor title:ArMV description:Arabis mosaic virus sample extracted from Chenopodiun amaranticolor
4 GSM362579 Lyssavirus genotype 7_LP chip 1,600 Veterinary Laboratories Agency 2009-01-22 [Oligo Array] AH/VLA Virus Detection Array LP1 1.6K (GPL8066) RNA Australian bat lyssavirus
Australian bat lyssavirus
cerebrum Amplified RNA from mouse brain infected with lyssaviruses
5 GSM397877 BPMV 345 Chinese Academy of Inspection and Quarantine 2009-04-27 [Oligo Array] Plant virus detection microarray (GPL8484) RNA Bean pod mottle virus
Bean pod mottle virus
unclassified source_name:Bean pod mottle virus sample extracted from Glycine max title:BPMV description:Bean pod mottle virus sample extracted from Glycine max
6 GSM608711 BVD_1 64,533 Lawrence Livermore National Laboratory 2010-10-14 [Oligo Array] Lawrence Livermore Microbial Detection Array version 1 (GPL11053) RNA Bovine viral diarrhea virus 1
Bovine viral diarrhea virus 1
unclassified source_name:Bovine viral diarrhea virus type 1 strain Singer title:BVD_1 description:Bovine viral diarrhea virus type 1 strain Singer Cy3 9mer
7 GSM607406 BVD_rndPCR2ng_1 36,415 Lawrence Livermore National Laboratory 2010-10-12 [Oligo Array] Lawrence Livermore Microbial Detection Array version 2 (GPL11040) RNA Bovine viral diarrhea virus 1
Bovine viral diarrhea virus 1
unclassified source_name:BVDV type 1 title:BVD_rndPCR2ng_1 description:Bovine viral diarrhea virus type 1 Cy3 9mer
8 GSM534862 California encephalitis virus-201 14,864 Washington University in St. Louis, School of Medicine 2010-04-20 [cDNA Array] Hemorrhagic Fever Microarray Release I (V2.10HF) (GPL10345) RNA California encephalitis virus
California encephalitis virus
unclassified source_name:infected culture title:California encephalitis virus-201 description:hybridization of infected culture for use in testing the performance of VIPR
9 GSM534884 California encephalitis virus-225 14,864 Washington University in St. Louis, School of Medicine 2010-04-20 [cDNA Array] Hemorrhagic Fever Microarray Release I (V2.10HF) (GPL10345) RNA California encephalitis virus
California encephalitis virus
unclassified source_name:infected culture title:California encephalitis virus-225 description:hybridization of infected culture for use in testing the performance of VIPR
10 GSM368396 0 hpi 310 University of Guelph 2009-02-06 [Oligo Array] University of Guelph, 1152 CfMNPV genes array version 1 (GPL8039) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:vgDNA, 0 hpi cDNA, 0 hpi title:0 hpi description:Temporal expression profiles of all 146 ORFs, and their complements, of Choristoneura fumiferana nucleopolyhedrovirus (CfMNPV) were determined by a modified oligonucleotide based two-channel DNA microarray. Total RNA was isolated at different times post infection from Cf203 insect cells infected with CfMNPV. The cDNA was synthesized, fluorescently labeled with Cy3, and co-hybridized to the microarray chips along with Cy5-labeled CfMNPV viral genomic DNA (vgDNA), which was used as an equimolar reference standard for each gene.
11 GSM368408 1 hpi 310 University of Guelph 2009-02-06 [Oligo Array] University of Guelph, 1152 CfMNPV genes array version 1 (GPL8039) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:vgDNA, 1hpi cDNA, 1hpi title:1 hpi description:Temporal expression profiles of all 146 ORFs, and their complements, of Choristoneura fumiferana nucleopolyhedrovirus (CfMNPV) were determined by a modified oligonucleotide based two-channel DNA microarray. Total RNA was isolated at different times post infection from Cf203 insect cells infected with CfMNPV. The cDNA was synthesized, fluorescently labeled with Cy3, and co-hybridized to the microarray chips along with Cy5-labeled CfMNPV viral genomic DNA (vgDNA), which was used as an equimolar reference standard for each gene.
12 GSM368409 3 hpi 310 University of Guelph 2009-02-06 [Oligo Array] University of Guelph, 1152 CfMNPV genes array version 1 (GPL8039) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:vgDNA, 3 hpi cDNA, 3 hpi title:3 hpi description:Temporal expression profiles of all 146 ORFs, and their complements, of Choristoneura fumiferana nucleopolyhedrovirus (CfMNPV) were determined by a modified oligonucleotide based two-channel DNA microarray. Total RNA was isolated at different times post infection from Cf203 insect cells infected with CfMNPV. The cDNA was synthesized, fluorescently labeled with Cy3, and co-hybridized to the microarray chips along with Cy5-labeled CfMNPV viral genomic DNA (vgDNA), which was used as an equimolar reference standard for each gene.
13 GSM368410 6 hpi 310 University of Guelph 2009-02-06 [Oligo Array] University of Guelph, 1152 CfMNPV genes array version 1 (GPL8039) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:vgDNA, 6 hpi cDNA, 6 hpi title:6 hpi description:Temporal expression profiles of all 146 ORFs, and their complements, of Choristoneura fumiferana nucleopolyhedrovirus (CfMNPV) were determined by a modified oligonucleotide based two-channel DNA microarray. Total RNA was isolated at different times post infection from Cf203 insect cells infected with CfMNPV. The cDNA was synthesized, fluorescently labeled with Cy3, and co-hybridized to the microarray chips along with Cy5-labeled CfMNPV viral genomic DNA (vgDNA), which was used as an equimolar reference standard for each gene.
14 GSM368411 9 hpi 310 University of Guelph 2009-02-06 [Oligo Array] University of Guelph, 1152 CfMNPV genes array version 1 (GPL8039) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:vgDNA, 9 hpi cDNA, 9 hpi title:9 hpi description:Temporal expression profiles of all 146 ORFs, and their complements, of Choristoneura fumiferana nucleopolyhedrovirus (CfMNPV) were determined by a modified oligonucleotide based two-channel DNA microarray. Total RNA was isolated at different times post infection from Cf203 insect cells infected with CfMNPV. The cDNA was synthesized, fluorescently labeled with Cy3, and co-hybridized to the microarray chips along with Cy5-labeled CfMNPV viral genomic DNA (vgDNA), which was used as an equimolar reference standard for each gene.
15 GSM368412 12 hpi 310 University of Guelph 2009-02-06 [Oligo Array] University of Guelph, 1152 CfMNPV genes array version 1 (GPL8039) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:vgDNA, 12 hpi cDNA, 12 hpi title:12 hpi description:Temporal expression profiles of all 146 ORFs, and their complements, of Choristoneura fumiferana nucleopolyhedrovirus (CfMNPV) were determined by a modified oligonucleotide based two-channel DNA microarray. Total RNA was isolated at different times post infection from Cf203 insect cells infected with CfMNPV. The cDNA was synthesized, fluorescently labeled with Cy3, and co-hybridized to the microarray chips along with Cy5-labeled CfMNPV viral genomic DNA (vgDNA), which was used as an equimolar reference standard for each gene.
16 GSM368413 18 hpi 310 University of Guelph 2009-02-06 [Oligo Array] University of Guelph, 1152 CfMNPV genes array version 1 (GPL8039) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:vgDNA, 18 hpi cDNA, 18 hpi title:18 hpi description:Temporal expression profiles of all 146 ORFs, and their complements, of Choristoneura fumiferana nucleopolyhedrovirus (CfMNPV) were determined by a modified oligonucleotide based two-channel DNA microarray. Total RNA was isolated at different times post infection from Cf203 insect cells infected with CfMNPV. The cDNA was synthesized, fluorescently labeled with Cy3, and co-hybridized to the microarray chips along with Cy5-labeled CfMNPV viral genomic DNA (vgDNA), which was used as an equimolar reference standard for each gene.
17 GSM368414 24 hpi 310 University of Guelph 2009-02-06 [Oligo Array] University of Guelph, 1152 CfMNPV genes array version 1 (GPL8039) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:vgDNA, 24 hpi cDNA, 24 hpi title:24 hpi description:Temporal expression profiles of all 146 ORFs, and their complements, of Choristoneura fumiferana nucleopolyhedrovirus (CfMNPV) were determined by a modified oligonucleotide based two-channel DNA microarray. Total RNA was isolated at different times post infection from Cf203 insect cells infected with CfMNPV. The cDNA was synthesized, fluorescently labeled with Cy3, and co-hybridized to the microarray chips along with Cy5-labeled CfMNPV viral genomic DNA (vgDNA), which was used as an equimolar reference standard for each gene.
18 GSM368415 36 hpi 310 University of Guelph 2009-02-06 [Oligo Array] University of Guelph, 1152 CfMNPV genes array version 1 (GPL8039) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:vgDNA, 36 hpi cDNA, 36 hpi title:36 hpi description:Temporal expression profiles of all 146 ORFs, and their complements, of Choristoneura fumiferana nucleopolyhedrovirus (CfMNPV) were determined by a modified oligonucleotide based two-channel DNA microarray. Total RNA was isolated at different times post infection from Cf203 insect cells infected with CfMNPV. The cDNA was synthesized, fluorescently labeled with Cy3, and co-hybridized to the microarray chips along with Cy5-labeled CfMNPV viral genomic DNA (vgDNA), which was used as an equimolar reference standard for each gene.
19 GSM368416 48 hpi 310 University of Guelph 2009-02-06 [Oligo Array] University of Guelph, 1152 CfMNPV genes array version 1 (GPL8039) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:vgDNA, 48 hpi cDNA, 48 hpi title:48 hpi description:Temporal expression profiles of all 146 ORFs, and their complements, of Choristoneura fumiferana nucleopolyhedrovirus (CfMNPV) were determined by a modified oligonucleotide based two-channel DNA microarray. Total RNA was isolated at different times post infection from Cf203 insect cells infected with CfMNPV. The cDNA was synthesized, fluorescently labeled with Cy3, and co-hybridized to the microarray chips along with Cy5-labeled CfMNPV viral genomic DNA (vgDNA), which was used as an equimolar reference standard for each gene.
20 GSM368417 72 hpi 310 University of Guelph 2009-02-06 [Oligo Array] University of Guelph, 1152 CfMNPV genes array version 1 (GPL8039) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:vgDNA, 72 hpi cDNA, 72 hpi title:72 hpi description:Temporal expression profiles of all 146 ORFs, and their complements, of Choristoneura fumiferana nucleopolyhedrovirus (CfMNPV) were determined by a modified oligonucleotide based two-channel DNA microarray. Total RNA was isolated at different times post infection from Cf203 insect cells infected with CfMNPV. The cDNA was synthesized, fluorescently labeled with Cy3, and co-hybridized to the microarray chips along with Cy5-labeled CfMNPV viral genomic DNA (vgDNA), which was used as an equimolar reference standard for each gene.
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