Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(810)		   Primates
(6)		   Rodents
(476)		   Mammals
(46)		   Vertebrates
(47)		   Invertebrates
(302)		   Plants
(266)		   Bacteria
(117)		   Viruses
(1)		   Phages
(0)		   Unclassified
(8)		   All
(2,081)		  
  SAGE NlaIII
(14)		   SAGE RsaI
(0)		   SAGE Sau3A
(1)		   MPSS
(3)		   GeneChip
(663)		   Tiling Array
(217)		   cDNA Array
(86)		   Oligo Array
(561)		   Bead Array
(209)		   Protein Array
(0)		   Antibody
(1)		   RT-PCR
(28)		   HT-Seq
(297)		   Other
(1)		   All
(2,081)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Dynamic Changes in the Copy Number of Pluripotency and Cell Proliferation Genes in Human ES and iPS Cells during Reprogramming and Time in Culture (GSE25925) [Bead Array] Illumina HumanOmni1-Quad BeadChip (GPL8882) THE SCRIPPS RESEARCH INSTITUTE 2010-12-08 Homo sapiens
Homo sapiens		 369,495,756
(1,140,419 x 324) 		29 24 84 2 13 5 2 4 8 6 9 138 by_platform
by_series
2 Genetic identification, replication, and functional fine-mapping of expression quantitative trait loci in primary human liver tissue [Illumina SNP array] (GSE26105) [Bead Array] Illumina Human610-Quad v1.0 BeadChip (GPL8887) University of Chicago 2010-12-16 Homo sapiens
Homo sapiens		 139,081,824
(620,901 x 224) 		1 223 by_platform
by_series
3 Genetic identification, replication, and functional fine-mapping of expression quantitative trait loci in primary human liver tissue (GSE26106) [Bead Array] Illumina Human610-Quad v1.0 BeadChip (GPL8887) University of Chicago 2010-12-16 Homo sapiens
Homo sapiens		 139,081,824
(620,901 x 224) 		1 223 by_platform
by_series
4 Genome-wide assessment of imprinted expression in human cells (GSE26286) [Bead Array] Illumina Human1M-Duov3 DNA Analysis BeadChip (Human1M-Duov3_B) (GPL6984) McGill University and Génome Québec Innovation Centre 2010-12-22 Homo sapiens
Homo sapiens		 124,715,448
(1,199,187 x 104) 		104 by_platform
by_series
5 A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants (GSE25893) [Bead Array] Illumina HumanOmni1-Quad BeadChip (GPL8882) The Hospital for Sick Children 2010-12-07 Homo sapiens
Homo sapiens		 41,055,084
(1,140,419 x 36) 		36 by_platform
by_series
6 A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants (GSE25893) [Bead Array] Illumina Human1Mv1 DNA Analysis BeadChip (Human1Mv1_C) (GPL6983) The Hospital for Sick Children 2010-12-07 Homo sapiens
Homo sapiens		 38,621,520
(1,072,820 x 36) 		36 by_platform
by_series
7 A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants (GSE25893) [Bead Array] Illumina HumanOmni2.5-Quad BeadChip (GPL13314) The Hospital for Sick Children 2010-12-07 Homo sapiens
Homo sapiens		 34,300,000
(2,450,000 x 14) 		14 by_platform
by_series
8 A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants (GSE25893) [Bead Array] Illumina Human660W-Quad v1.0 BeadChip (GPL8888) The Hospital for Sick Children 2010-12-07 Homo sapiens
Homo sapiens		 23,665,176
(657,366 x 36) 		36 by_platform
by_series
9 Genome-wide profiling of whole blood from patients with defects in Toll-like receptors (TLRs) and IL-1Rs (the TIR pathway) signaling (GSE25742) [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) Baylor Institute for Immunology Research 2010-12-01 Homo sapiens
Homo sapiens		 17,239,315
(47,231 x 365) 		365 by_platform
by_series
10 Investigation of somatic copy number variation in MZ twins (GSE25826) [Bead Array] Illumina Human1M-Duov3 DNA Analysis BeadChip (Human1M-Duov3_B) (GPL6984) University of Texas Health Science Center at San Antonio 2010-12-02 Homo sapiens
Homo sapiens		 14,390,244
(1,199,187 x 12) 		12 by_platform
by_series
11 A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants (GSE25893) [Bead Array] Illumina HumanHap650Yv3 Genotyping BeadChip (HumanHap650Yv3_A) (GPL6987) The Hospital for Sick Children 2010-12-07 Homo sapiens
Homo sapiens		 11,896,524
(660,918 x 18) 		18 by_platform
by_series
12 Global hypomethylation identifies loci targeted for hypermethylation in head and neck cancer (GSE25093) [Bead Array] Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2) (GPL8490) Brown University 2010-11-02 Homo sapiens
Homo sapiens		 8,880,116
(27,578 x 322) 		213 109 by_platform
by_series
13 Genome-wide assessment of imprinted expression in human cells (GSE26286) [Bead Array] Illumina Human1Mv1 DNA Analysis BeadChip (Human1Mv1_C) (GPL6983) McGill University and Génome Québec Innovation Centre 2010-12-22 Homo sapiens
Homo sapiens		 8,582,560
(1,072,820 x 8) 		8 by_platform
by_series
14 Expression Array of Lymphoblastoid Cell lines Under Inflammatory Conditions (GSE25543) [Bead Array] Illumina HumanWG-6 v3.0 expression beadchip (GPL6884) UBC James Hogg Research Centre 2010-11-22 Homo sapiens
Homo sapiens		 8,296,510
(48,803 x 170) 		170 by_platform
by_series
15 Clonal evolution through loss of chromosomes and subsequent polyploidization in chondrosarcoma (GSE25985) [Bead Array] Illumina HumanOmni1-Quad BeadChip (GPL8882) Dept of Clinical Genetics 2010-12-10 Homo sapiens
Homo sapiens		 7,982,933
(1,140,419 x 7) 		7 by_platform
by_series
16 Global hypomethylation identifies loci targeted for hypermethylation in head and neck cancer: blood controls (GSE25091) [Bead Array] Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2) (GPL8490) Brown University 2010-11-02 Homo sapiens
Homo sapiens		 5,874,114
(27,578 x 213) 		213 by_platform
by_series
17 DNA methylation profiling reveals novel biomarkers and important roles for DNA methyltransferases in prostate cancer (GSE26126) [Bead Array] Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2) (GPL8490) Stanford University 2010-12-16 Homo sapiens
Homo sapiens		 5,322,554
(27,578 x 193) 		191 2 by_platform
by_series
18 Cryopreservation effects on peripheral blood (GSE24758) [Bead Array] Illumina human-6 v2.0 expression beadchip (GPL6102) University of Bonn 2010-10-18 Homo sapiens
Homo sapiens		 4,918,902
(48,702 x 101) 		101 by_platform
by_series
19 SNP data from 13 childhood adrenocortical tumours from Brazilian patients and 6 matched normal samples (GSE24804) [Bead Array] Illumina HumanCNV370-Duov1 DNA Analysis BeadChip (HumanCNV370v1) (GPL6986) Ligue Contre Le Cancer 2010-10-19 Homo sapiens
Homo sapiens		 4,815,252
(370,404 x 13) 		13 by_platform
by_series
20 The effects of EBV transformation on gene expression (GSE26210) [Bead Array] Illumina HumanHT-12 V3.0 expression beadchip (GPL6947) University of Chicago 2010-12-20 Homo sapiens
Homo sapiens		 4,685,088
(48,803 x 96) 		96 by_platform
by_series
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