Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(806)		   Primates
(10)		   Rodents
(554)		   Mammals
(32)		   Vertebrates
(48)		   Invertebrates
(182)		   Plants
(225)		   Bacteria
(109)		   Viruses
(2)		   Phages
(0)		   Unclassified
(5)		   All
(1,980)		  
  SAGE NlaIII
(1)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(749)		   Tiling Array
(149)		   cDNA Array
(102)		   Oligo Array
(489)		   Bead Array
(181)		   Protein Array
(0)		   Antibody
(1)		   RT-PCR
(14)		   HT-Seq
(284)		   Other
(10)		   All
(1,980)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Hepatocellular Carcinoma Differential Network (SNP profiling of tumor and non-tumor tissue) (GSE28127) [Bead Array] Illumina HumanHap650Yv3 Genotyping BeadChip (HumanHap650Yv3_A) (GPL6987) Merck 2011-03-23 Homo sapiens
Homo sapiens		 265,028,118
(660,918 x 401) 		401 by_platform
by_series
2 A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants (HumanOmni1-Quad) (GSE28104) [Bead Array] Illumina HumanOmni1-Quad BeadChip (GPL8882) The Hospital for Sick Children 2011-03-22 Homo sapiens
Homo sapiens		 41,055,084
(1,140,419 x 36) 		36 by_platform
by_series
3 A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants (Human1Mv1_C) (GSE28092) [Bead Array] Illumina Human1Mv1 DNA Analysis BeadChip (Human1Mv1_C) (GPL6983) The Hospital for Sick Children 2011-03-22 Homo sapiens
Homo sapiens		 38,621,520
(1,072,820 x 36) 		36 by_platform
by_series
4 A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants (HumanOmni2.5-Quad) (GSE28101) [Bead Array] Illumina HumanOmni2.5-Quad BeadChip (GPL13314) The Hospital for Sick Children 2011-03-22 Homo sapiens
Homo sapiens		 34,300,000
(2,450,000 x 14) 		14 by_platform
by_series
5 A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants (Human660W-Quad) (GSE28103) [Bead Array] Illumina Human660W-Quad v1.0 BeadChip (GPL8888) The Hospital for Sick Children 2011-03-22 Homo sapiens
Homo sapiens		 23,665,176
(657,366 x 36) 		36 by_platform
by_series
6 Prospective comparison of genome-wide aCGH platforms for the detection of CNVs in MR (Illumina HumanHap550) (GSE27364) [Bead Array] Illumina HumanHap550 Genotyping BeadChip v1 (GPL6433) University of British Columbia 2011-02-16 Homo sapiens
Homo sapiens		 16,660,560
(555,352 x 30) 		30 by_platform
by_series
7 Prospective comparison of genome-wide aCGH platforms for the detection of CNVs in MR (GSE27367) [Bead Array] Illumina HumanHap550 Genotyping BeadChip v1 (GPL6433) University of British Columbia 2011-02-16 Homo sapiens
Homo sapiens		 16,660,560
(555,352 x 30) 		30 by_platform
by_series
8 Pediatric age-associated DNA methylation (GSE27097) [Bead Array] Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2) (GPL8490) Emory University 2011-02-05 Homo sapiens
Homo sapiens		 13,623,532
(27,578 x 494) 		494 by_platform
by_series
9 A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants (Illumina_650Y) (GSE28102) [Bead Array] Illumina HumanHap650Yv3 Genotyping BeadChip (HumanHap650Yv3_A) (GPL6987) The Hospital for Sick Children 2011-03-22 Homo sapiens
Homo sapiens		 11,896,524
(660,918 x 18) 		18 by_platform
by_series
10 Integrative genomic analysis of sporadic clear cell Renal Cell Carcinoma (GSE27852) [Bead Array] Illumina HumanHap550-Duov3 Genotyping BeadChip (HumanHap550-2v3_B) (GPL6982) University of Pennsylvania School of Medicine 2011-03-09 Homo sapiens
Homo sapiens		 10,106,388
(561,466 x 18) 		18 by_platform
by_series
11 Integrative genomic analysis of sporadic clear cell Renal Cell Carcinoma (GSE27852) [Bead Array] Illumina Human610-Quad v1.0 BeadChip (GPL8887) University of Pennsylvania School of Medicine 2011-03-09 Homo sapiens
Homo sapiens		 9,313,515
(620,901 x 15) 		15 by_platform
by_series
12 Evidence of mechanism how rs7575840 influences apolipoprotein B containing lipid particles (GSE27666) [Bead Array] Illumina HumanHT-12 V3.0 expression beadchip (GPL6947) UCLA 2011-03-03 Homo sapiens
Homo sapiens		 8,540,525
(48,803 x 175) 		175 by_platform
by_series
13 Bone microarray profiles from the Hybrid Mouse Diversity Panel (GSE27483) [Bead Array] Illumina mouse-6 v1.1 expression beadchip (GPL6105) UCLA 2011-02-24 Mus musculus
Mus musculus		 6,948,168
(46,632 x 149) 		149 by_platform
by_series
14 Anti-cancer drug sensitive DNA methylation marker research (GSE27130) [Bead Array] Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2) (GPL8490) KRIBB 2011-02-08 Homo sapiens
Homo sapiens		 6,839,344
(27,578 x 248) 		248 by_platform
by_series
15 Genome-wide consequences of compromised NMD and their relavence for variable clinical phenotype of patients with UPF3B mutations [mRNA profiling] (GSE27125) [Bead Array] HumanOmniExpress BeadChip (GPL13135) SA Pathology 2011-02-07 Homo sapiens
Homo sapiens		 5,865,616
(733,202 x 8) 		8 by_platform
by_series
16 Prognostic Gene Expression Signature of Carcinoma Associated Fibroblasts in Non-Small Cell Lung Cancer [genome variation profiling] (GSE27289) [Bead Array] HumanOmniExpress BeadChip (GPL13135) Ontario Cancer Institute/ Princess Margaret Hospital 2011-02-14 Homo sapiens
Homo sapiens		 5,865,616
(733,202 x 8) 		8 by_platform
by_series
17 Genome-wide consequences of compromised NMD and their relavence for variable clinical phenotype of patients with UPF3B mutations [CNV] (GSE27412) [Bead Array] HumanOmniExpress BeadChip (GPL13135) SA Pathology 2011-02-18 Homo sapiens
Homo sapiens		 5,865,616
(733,202 x 8) 		8 by_platform
by_series
18 Genome-wide consequences of compromised NMD and their relavence for variable clinical phenotype of patients with UPF3B mutations (GSE27433) [Bead Array] HumanOmniExpress BeadChip (GPL13135) SA Pathology 2011-02-22 Homo sapiens
Homo sapiens		 5,865,616
(733,202 x 8) 		8 by_platform
by_series
19 The influence of aging, environmental exposures and local sequence features on the variation of DNA methylation in blood (GSE26543) [Bead Array] Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2) (GPL8490) Brown University 2011-01-11 Homo sapiens
Homo sapiens		 5,653,490
(27,578 x 205) 		205 by_platform
by_series
20 MOLECULAR CHARACTERIZATION OF LIVER ALLOGRAFTS FROM OPERATIONALLY TOLERANT TRANSPLANT RECIPIENTS (Illumina) (GSE26625) [Bead Array] Illumina HumanHT-12 V3.0 expression beadchip (GPL6947) CIBEREHD 2011-01-13 Homo sapiens
Homo sapiens		 5,368,330
(48,803 x 110) 		110 by_platform
by_series
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