Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(806)		   Primates
(10)		   Rodents
(554)		   Mammals
(32)		   Vertebrates
(48)		   Invertebrates
(182)		   Plants
(225)		   Bacteria
(109)		   Viruses
(2)		   Phages
(0)		   Unclassified
(5)		   All
(1,980)		  
  SAGE NlaIII
(1)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(749)		   Tiling Array
(149)		   cDNA Array
(102)		   Oligo Array
(489)		   Bead Array
(181)		   Protein Array
(0)		   Antibody
(1)		   RT-PCR
(14)		   HT-Seq
(284)		   Other
(10)		   All
(1,980)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Wide ranging DNA methylation differences of primary trophoblast cell populations and derived-cell lines (GSE26683) [Bead Array] Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2) (GPL8490) Murdoch Children's Research Institute 2011-01-18 Homo sapiens
Homo sapiens		 413,670
(27,578 x 15) 		3 10 1 1 by_platform
by_series
2 Whole genome expression array profiling highlights differences in mucosal defense genes in Barrett's esophagus and esophageal adenocarcinoma. (GSE28302) [Bead Array] Sentrix Human-6 Expression BeadChip (GPL2507) Queensland Institute of Medical Research 2011-03-31 Homo sapiens
Homo sapiens		 2,553,822
(47,293 x 54) 		54 by_platform
by_series
3 Valproic Acid Confers Functional Pluripotency to Human Amniotic Fluid Stem Cells in a Transgene-free Approach (GSE26940) [Bead Array] Illumina HumanRef-8 v3.0 expression beadchip (GPL6883) Max Planck Institute for Molecular Genetics 2011-01-28 Homo sapiens
Homo sapiens		 367,890
(24,526 x 15) 		3 12 by_platform
by_series
4 Upregulated stromal EGFR and vascular remodeling in human NSCLC murine models (xenografts) of VEGF inhibitor resistance (GSE26644) [Bead Array] Illumina HumanWG-6 v3.0 expression beadchip (GPL6884) UT MD Anderson Cancer Center 2011-01-14 Homo sapiens
Homo sapiens		 292,818
(48,803 x 6) 		6 by_platform
by_series
5 Upregulated stromal EGFR and vascular remodeling in human NSCLC murine models (xenografts) of VEGF inhibitor resistance (GSE26644) [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) UT MD Anderson Cancer Center 2011-01-14 Mus musculus
Mus musculus		 271,686
(45,281 x 6) 		6 by_platform
by_series
6 Unamplified Cap Analysis of Gene Expression on a single molecule sequencer (HeliScopeCAGE) (GSE28148) [Bead Array] Illumina HumanWG-6 v3.0 expression beadchip (GPL6884) RIKEN 2011-03-24 Homo sapiens
Homo sapiens		 292,818
(48,803 x 6) 		3 3 by_platform
by_series
7 Two different 4-week energy-restricted diets. (GSE27121) [Bead Array] Illumina HumanHT-12 V3.0 expression beadchip (GPL6947) INSERM UMRS-U872 2011-02-07 Homo sapiens
Homo sapiens		 3,416,210
(48,803 x 70) 		70 by_platform
by_series
8 Transcriptome-wide changes in HeLa cell line investigated in response to Heat-shock stress (GSE26776) [Bead Array] Illumina human-6 v2.0 expression beadchip (GPL6102) Institute Of Genomics and Integrative Biology 2011-01-20 Homo sapiens
Homo sapiens		 292,212
(48,702 x 6) 		6 by_platform
by_series
9 Transcriptome and translational signaling following endurance exercise in trained skeletal muscle: impact of dietary protein (GSE27285) [Bead Array] Illumina humanRef-8 v2.0 expression beadchip (GPL6104) Nestle Research Center 2011-02-14 Homo sapiens
Homo sapiens		 865,215
(22,185 x 39) 		39 by_platform
by_series
10 Transcriptional profiles of pediatric SLE neutrophils and Healthy neutrophils cultured with SLE sera or Interferon (GSE27427) [Bead Array] Sentrix Human-6 v2 Expression BeadChip (GPL6106) Baylor Institute for Immunology Research 2011-02-21 Homo sapiens
Homo sapiens		 2,288,947
(48,701 x 47) 		47 by_platform
by_series
11 Transcript and protein profiling identify signaling, growth arrest, apoptosis and NFκB-survival signatures following GnRH receptor activation. (GSE27467) [Bead Array] Illumina HumanHT-12 V3.0 expression beadchip (GPL6947) Breakthrough Breast Cancer Research Unit 2011-02-23 Homo sapiens
Homo sapiens		 2,684,165
(48,803 x 55) 		55 by_platform
by_series
12 Total gene expression analysis of LMP2A/λ-MYC and λ-MYC tumors (GSE26918) [Bead Array] Illumina MouseRef-8 v2.0 expression beadchip (GPL6885) Northwestern University 2011-01-27 Mus musculus
Mus musculus		 719,516
(25,697 x 28) 		12 16 by_platform
by_series
13 The specifcity of innate immune response is enforced by repression of interferon-response elements by NFkB p50 (GSE27112) [Bead Array] Illumina MouseRef-8 v2.0 expression beadchip (GPL6885) UCSD 2011-02-07 Mus musculus
Mus musculus		 591,031
(25,697 x 23) 		23 by_platform
by_series
14 The specifcity of innate immune response is enforced by repression of interferon-response elements by NFkB p50 (GSE27112) [Bead Array] Illumina mouseRef-8 v1.1 expression beadchip (GPL6103) UCSD 2011-02-07 Mus musculus
Mus musculus		 246,130
(24,613 x 10) 		10 by_platform
by_series
15 The pioneer factor PBX1 guides a distinct ERa signaling in breast cancer [mRNA profiling] (GSE28006) [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) Dartmouth College 2011-03-17 Homo sapiens
Homo sapiens		 377,848
(47,231 x 8) 		8 by_platform
by_series
16 The pioneer factor PBX1 guides a distinct ERa signaling in breast cancer (GSE28008) [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) Dartmouth College 2011-03-17 Homo sapiens
Homo sapiens		 377,848
(47,231 x 8) 		8 by_platform
by_series
17 The kinases MEKK2 and MEKK3 regulate Transforming Growth Factor-β-mediated helper T cell differentiation (GSE26987) [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) Yale University 2011-01-31 Mus musculus
Mus musculus		 181,124
(45,281 x 4) 		4 by_platform
by_series
18 The influence of aging, environmental exposures and local sequence features on the variation of DNA methylation in blood (GSE26543) [Bead Array] Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2) (GPL8490) Brown University 2011-01-11 Homo sapiens
Homo sapiens		 5,653,490
(27,578 x 205) 		205 by_platform
by_series
19 The HDAC inhibitor panobinostat (LBH589) inhibits Acute Lymphoblastic leukemia (ALL) in vitro and in vivo in a new characterized human ALL mice model (Illumina) (GSE26791) [Bead Array] Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2) (GPL8490) CIMA 2011-01-21 Homo sapiens
Homo sapiens		 330,936
(27,578 x 12) 		12 by_platform
by_series
20 The HDAC inhibitor panobinostat (LBH589) inhibits Acute Lymphoblastic leukemia (ALL) in vitro and in vivo in a new characterized human ALL mice model (GSE26807) [Bead Array] Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2) (GPL8490) CIMA 2011-01-21 Homo sapiens
Homo sapiens		 330,936
(27,578 x 12) 		12 by_platform
by_series
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