Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(933)
  Primates
(11)
  Rodents
(598)
  Mammals
(42)
  Vertebrates
(71)
  Invertebrates
(160)
  Plants
(302)
  Bacteria
(108)
  Viruses
(0)
  Phages
(0)
  Unclassified
(12)
  All
(2,240)
 
  SAGE NlaIII
(1)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(1)
  GeneChip
(740)
  Tiling Array
(96)
  cDNA Array
(86)
  Oligo Array
(675)
  Bead Array
(220)
  Protein Array
(0)
  Antibody
(1)
  RT-PCR
(16)
  HT-Seq
(399)
  Other
(4)
  All
(2,240)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Comparison between cell lines from 9 different cancer tissue (NCI-60) (Affymetrix HuEx 1.0) (GSE29682) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) National Institutes of Health 2011-06-01 Homo sapiens
Homo sapiens
254,923,590
(1,432,155 x 178)
15 17 26 21 21 24 21 22 11 by_platform
by_series
2 The histotype-specific copy-number landscape of ovarian cancer (GSE30311) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Duke-NUS graduate medical school 2011-06-29 Homo sapiens
Homo sapiens
191,840,988
(1,880,794 x 102)
102 by_platform
by_series
3 Deep sequencing of gastric carcinoma reveals somatic mutations relevant to personalized medicine [Affymetrix SNP array data] (GSE29996) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Singapore Institute of Clinical Sciences 2011-06-15 Homo sapiens
Homo sapiens
188,079,400
(1,880,794 x 100)
100 by_platform
by_series
4 Deep sequencing of gastric carcinoma reveals somatic mutations relevant to personalized medicine (GSE29999) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Singapore Institute of Clinical Sciences 2011-06-15 Homo sapiens
Homo sapiens
188,079,400
(1,880,794 x 100)
100 by_platform
by_series
5 High-resolution genome-wide copy-number analysis suggests a monoclonal origin of multi-focal prostate cancer (GSE29569) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Queen Mary 2011-05-26 Homo sapiens
Homo sapiens
124,132,404
(1,880,794 x 66)
66 by_platform
by_series
6 The histotype-specific copy-number landscape of ovarian cancer (copy number Japan) (GSE30283) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Duke-NUS graduate medical school 2011-06-28 Homo sapiens
Homo sapiens
105,324,464
(1,880,794 x 56)
56 by_platform
by_series
7 Serous ovarian benign tumor and type II carcinoma data set for expression and paracrine signaling investigation (GSE29156) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) University of North Carolina at Charlotte 2011-05-09 Homo sapiens
Homo sapiens
103,115,160
(1,432,155 x 72)
72 by_platform
by_series
8 Transcriptional glucocorticoid-response at the exon level and NR3C1 DNA-binding in childhood leukemia models: mRNA and ChIP-chip profiling (GSE29063) [GeneChip] Affymetrix Human Promoter 1.0R Array [genome build GRCh37] (GPL13490) Medical University Innsbruck 2011-05-04 Homo sapiens
Homo sapiens
92,098,992
(3,837,458 x 24)
24 by_platform
by_series
9 Genetic analysis of ancestry, admixture, and selection in Bolivian and Totonac populations of the New World (GSE29851) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) University of Utah 2011-06-08 Homo sapiens
Homo sapiens
88,397,318
(1,880,794 x 47)
47 by_platform
by_series
10 The histotype-specific copy-number landscape of ovarian cancer (copy number SNP) (GSE30300) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Duke-NUS graduate medical school 2011-06-29 Homo sapiens
Homo sapiens
86,516,524
(1,880,794 x 46)
46 by_platform
by_series
11 Affymetrix SNP array data for hepatocellular carcinoma tissue (GSE29667) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Zhongshan hospital, Fudan University 2011-06-01 Homo sapiens
Homo sapiens
56,423,820
(1,880,794 x 30)
30 by_platform
by_series
12 Transcriptional glucocorticoid-response at the exon level and NR3C1 DNA-binding in childhood leukemia models; NR3C1-DNA binding in CCRF-CEM-C7H2 T-ALL cells. (GSE29056) [GeneChip] Affymetrix Human Promoter 1.0R Array [genome build GRCh37] (GPL13490) Medical University Innsbruck 2011-05-04 Homo sapiens
Homo sapiens
46,049,496
(3,837,458 x 12)
12 by_platform
by_series
13 Transcriptional glucocorticoid-response at the exon level and NR3C1 DNA-binding in childhood leukemia models; NR3C1-DNA binding in NALM6 precursor B-ALL cells. (GSE29057) [GeneChip] Affymetrix Human Promoter 1.0R Array [genome build GRCh37] (GPL13490) Medical University Innsbruck 2011-05-04 Homo sapiens
Homo sapiens
46,049,496
(3,837,458 x 12)
12 by_platform
by_series
14 Orthotopic xenografts of RCC retain histological, immunophenotypic and genetic features of tumors in patients (GSE29062) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) DFCI 2011-05-04 Homo sapiens
Homo sapiens
37,615,880
(1,880,794 x 20)
20 by_platform
by_series
15 Gene expression profiles of 48 normal and 47 prostate tumor tissue samples (GSE29079) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version] (GPL5175) German Cancer Research Center and National Center of Tumor Diseases 2011-05-05 Homo sapiens
Homo sapiens
30,107,305
(316,919 x 95)
95 by_platform
by_series
16 Identification of a common prognostic gene signature and its association with miR-181 regulation in human acute myeloid leukemia (GSE30257) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version] (GPL5175) university of chicago 2011-06-27 Homo sapiens
Homo sapiens
29,473,467
(316,919 x 93)
93 by_platform
by_series
17 Identification of prognostic gene signatures in AML (GSE30285) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version] (GPL5175) university of chicago 2011-06-28 Homo sapiens
Homo sapiens
29,473,467
(316,919 x 93)
93 by_platform
by_series
18 Gene Copy Number Aberrations are Associated with Survival in Histological Subgroups of Non-Small Cell Lung Cancer (copy number data) (GSE28572) [GeneChip] [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array (GPL3718) Uppsala Array Platform 2011-04-12 Homo sapiens
Homo sapiens
26,496,138
(262,338 x 101)
100 1 by_platform
by_series
19 Gene Copy Number Aberrations are Associated with Survival in Histological Subgroups of Non-Small Cell Lung Cancer (GSE28582) [GeneChip] [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array (GPL3718) Uppsala Array Platform 2011-04-13 Homo sapiens
Homo sapiens
26,496,138
(262,338 x 101)
100 1 by_platform
by_series
20 Testosterone-dependent and independent transcriptional networks in the hypothalamus of Gpr54 and Kiss1 knockout male mice (GSE28383) [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) British Columbia Cancer Agency 2011-04-05 Mus musculus
Mus musculus
21,366,127
(1,256,831 x 17)
17 by_platform
by_series
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