Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(205)		   Primates
(0)		   Rodents
(86)		   Mammals
(8)		   Vertebrates
(9)		   Invertebrates
(17)		   Plants
(67)		   Bacteria
(37)		   Viruses
(0)		   Phages
(0)		   Unclassified
(4)		   All
(433)		  
  SAGE NlaIII
(2)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(2)		   GeneChip
(106)		   Tiling Array
(12)		   cDNA Array
(36)		   Oligo Array
(161)		   Bead Array
(80)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(34)		   Other
(0)		   All
(433)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Identification of SNP candidates associated with chemo-responsiveness in colorectal cancer patients (GSE21228) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Korea Research Institute of Bioscience and Biotechnology 2010-04-06 Homo sapiens
Homo sapiens		 221,933,692
(1,880,794 x 118) 		118 by_platform
by_series
2 SNP data from blood DNAs of patients with gastric cancer (GSE26853) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) KRIBB 2011-01-25 Homo sapiens
Homo sapiens		 178,675,430
(1,880,794 x 95) 		95 by_platform
by_series
3 Identification of novel SNP candidates associated with chemo-responsiveness in colorectal cancers (GSE16718) [GeneChip] [GenomeWideSNP_5] Affymetrix Genome-Wide Human SNP 5.0 Array (GPL6804) Korea Research Institute of Bioscience and Biotechnology 2009-06-19 Homo sapiens
Homo sapiens		 81,592,576
(784,544 x 104) 		104 by_platform
by_series
4 SNP data from genomic DNA in patient with rectal cancer (GSE35282) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) KRIBB 2012-01-23 Homo sapiens
Homo sapiens		 80,874,142
(1,880,794 x 43) 		43 by_platform
by_series
5 Prediction of Recurrence-Free Survival in Postoperative NSCLC Patients—a Useful Prospective Clinical Practice (GSE8894) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) samsung medical center 2007-08-29 Homo sapiens
Homo sapiens		 7,545,150
(54,675 x 138) 		138 by_platform
by_series
6 Discriminant for genotoxic and non-genotoxic carcinogens by differentially expressed gene profiling (GSE31307) [GeneChip] [Rat230_2] Affymetrix Rat Genome 230 2.0 Array (GPL1355) Seoul Nat'l Univ. 2011-08-10 Rattus norvegicus
Rattus norvegicus		 2,021,435
(31,099 x 65) 		65 by_platform
by_series
7 Identification of cholangiocarcinoma-like gene expression traits in hepatocellular carcinoma (GSE15765) [GeneChip] [HG-U133A_2] Affymetrix Human Genome U133A 2.0 Array (GPL571) Ajou University School of Medicine 2009-04-21 Homo sapiens
Homo sapiens		 2,004,930
(22,277 x 90) 		90 by_platform
by_series
8 Patient specific orthotopic glioblastoma xenograft models recapitulate the histopathology and biology of human glioblastomas in situ (gene expression) (GSE42669) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) Samsung Medical Center 2012-12-02 Homo sapiens
Homo sapiens		 1,931,226
(33,297 x 58) 		58 by_platform
by_series
9 Patient specific orthotopic glioblastoma xenograft models recapitulate the histopathology and biology of human glioblastomas in situ (GSE42670) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) Samsung Medical Center 2012-12-02 Homo sapiens
Homo sapiens		 1,931,226
(33,297 x 58) 		58 by_platform
by_series
10 Expression data from donor lungs of cardiac death and brain death donors (GSE18995) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) Seoul National University Hospital 2009-11-12 Homo sapiens
Homo sapiens		 1,913,625
(54,675 x 35) 		35 by_platform
by_series
11 Expression data from cytoplasmic hybrid (cybrid) and rho0 cells (GSE26244) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) Korea Research Institute of Bioscience and Biotechnology 2010-12-21 Homo sapiens
Homo sapiens		 1,798,038
(33,297 x 54) 		54 by_platform
by_series
12 Expression data from H1299 and H460 lung cancer cell lines (GSE20549) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) Seoul National University 2010-02-26 Homo sapiens
Homo sapiens		 1,398,474
(33,297 x 42) 		12 3 3 24 by_platform
by_series
13 Expression data from 30 medulloblastomas (GSE30074) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) Seoul National University 2011-06-17 Homo sapiens
Homo sapiens		 998,910
(33,297 x 30) 		30 by_platform
by_series
14 Identification of Developing Xylem-Specific Promoters from Poplar by Using tissue type-Specific Whole Genome Transcriptome Analysis. (GSE30507) [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) Kyung Hee University 2011-07-08 Populus trichocarpa
Populus trichocarpa		 982,608
(61,413 x 16) 		14 2 by_platform
by_series
15 Mesenchymal Stem Cells Transfer Mitochondria to the Cells with Virtually Absent Mitochondrial Function but Not to the Cells Harboring Pathogenic Mitochondrial DNA Mutations (GSE33831) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) SNUBI 2011-11-20 Homo sapiens
Homo sapiens		 820,125
(54,675 x 15) 		15 by_platform
by_series
16 Expression profiles of Embryonic stem cells derived from normal fertilization and parthenogenesis (GSE10776) [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) Seoul National University 2008-03-11 Mus musculus
Mus musculus		 676,515
(45,101 x 15) 		15 by_platform
by_series
17 Therapeutic efficacy of human umbilical cord blood-derived mesenchymal stem cells in myocardial repair after infarction (GSE13491) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) Seoul National University Hospital 2008-11-06 Homo sapiens
Homo sapiens		 656,100
(54,675 x 12) 		12 by_platform
by_series
18 Drosha or DGCR8 knockdown effects on mRNA levels in HeLa (GSE13639) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) Seoul National University 2008-11-18 Homo sapiens
Homo sapiens		 656,100
(54,675 x 12) 		12 by_platform
by_series
19 Effect of miRNA biogenesis factors on mRNA levels (GSE13640) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) Seoul National University 2008-11-18 Homo sapiens
Homo sapiens		 656,100
(54,675 x 12) 		12 by_platform
by_series
20 Differential gene expression of young and senescent HUVECs under static and laminar shear stress conditions (GSE13712) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) Kyungpook National University School of Medicine 2008-11-23 Homo sapiens
Homo sapiens		 656,100
(54,675 x 12) 		12 by_platform
by_series
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