Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(806)		   Primates
(10)		   Rodents
(554)		   Mammals
(32)		   Vertebrates
(48)		   Invertebrates
(182)		   Plants
(225)		   Bacteria
(109)		   Viruses
(2)		   Phages
(0)		   Unclassified
(5)		   All
(1,980)		  
  SAGE NlaIII
(1)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(749)		   Tiling Array
(149)		   cDNA Array
(102)		   Oligo Array
(489)		   Bead Array
(181)		   Protein Array
(0)		   Antibody
(1)		   RT-PCR
(14)		   HT-Seq
(284)		   Other
(10)		   All
(1,980)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 SNP data from blood DNAs of patients with gastric cancer (GSE26853) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) KRIBB 2011-01-25 Homo sapiens
Homo sapiens		 178,675,430
(1,880,794 x 95) 		95 by_platform
by_series
2 Genome-wide Analyses of Diffuse Intrinsic Pontine Gliomas (GSE26576) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) St Jude Children's Research Institute 2011-01-12 Homo sapiens
Homo sapiens		 167,390,666
(1,880,794 x 89) 		51 4 34 by_platform
by_series
3 81 human leukemia samples (affymetrix exon array) (GSE27370) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) university of chicago 2011-02-16 Homo sapiens
Homo sapiens		 116,004,555
(1,432,155 x 81) 		81 by_platform
by_series
4 Affymetrix SNP array data for Chronic Lymphocytic Leukemia_diagnostic sample_patient samples (GSE28030) [GeneChip] [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array (GPL3718) Uppsala Array Platform 2011-03-17 Homo sapiens
Homo sapiens		 96,802,722
(262,338 x 369) 		369 by_platform
by_series
5 Prospective comparison of genome-wide aCGH platforms for the detection of CNVs in MR (GenomeWideSNP_6) (GSE27145) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) University of British Columbia 2011-02-08 Homo sapiens
Homo sapiens		 84,635,730
(1,880,794 x 45) 		45 by_platform
by_series
6 Prospective comparison of genome-wide aCGH platforms for the detection of CNVs in MR (GSE27367) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) University of British Columbia 2011-02-16 Homo sapiens
Homo sapiens		 84,635,730
(1,880,794 x 45) 		45 by_platform
by_series
7 A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants (GenomeWideSNP_6) (GSE28111) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) The Hospital for Sick Children 2011-03-22 Homo sapiens
Homo sapiens		 67,708,584
(1,880,794 x 36) 		36 by_platform
by_series
8 Exon array analysis reveals neuroblastoma tumors have distinct alternative splicing patterns according to stage and MYCN amplification status (GSE27608) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) National Cancer Institute 2011-03-01 Homo sapiens
Homo sapiens		 67,311,285
(1,432,155 x 47) 		47 by_platform
by_series
9 Validation of rapid embryo tracking using cell-free fetal DNA enriched from maternal circulation at 9 weeks gestation (GSE26404) [GeneChip] [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array (GPL3718) RMA of New Jersey 2011-01-03 Homo sapiens
Homo sapiens		 54,303,966
(262,338 x 207) 		136 71 by_platform
by_series
10 Transcriptome analysis on gastric cancer (GSE27342) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version] (GPL5175) University of Georgia 2011-02-16 Homo sapiens
Homo sapiens		 50,707,040
(316,919 x 160) 		160 by_platform
by_series
11 Overexpression of NUCKS1 in colorectal cancer correlates with recurrence after curative surgery (copy number analysis) (GSE27910) [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) Tokyo Medical and Dental University 2011-03-11 Homo sapiens
Homo sapiens		 46,722,088
(238,378 x 196) 		196 by_platform
by_series
12 Overexpression of NUCKS1 in colorectal cancer correlates with recurrence after curative surgery (GSE27913) [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) Tokyo Medical and Dental University 2011-03-11 Homo sapiens
Homo sapiens		 46,722,088
(238,378 x 196) 		196 by_platform
by_series
13 The response to ionizing radiation at the exon level (GSE26841) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version] (GPL5175) Peter MacCallum Cancer Centre 2011-01-24 Homo sapiens
Homo sapiens		 41,833,308
(316,919 x 132) 		60 72 by_platform
by_series
14 Exon-array profiling of squamous cell carcinoma and adenocarcinoma in human cervical FFPE samples (GSE27388) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) Paterson Institute for Cancer Research 2011-02-17 Homo sapiens
Homo sapiens		 40,100,340
(1,432,155 x 28) 		28 by_platform
by_series
15 26 mouse ES EB samples affymetrix exon array (affymetrix exon array) (GSE27397) [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) university of chicago 2011-02-17 Mus musculus
Mus musculus		 32,677,606
(1,256,831 x 26) 		26 by_platform
by_series
16 Delineation of Two Clinically and Molecularly Distinct Subgroups of Posterior Fossa Ependymoma (GSE27279) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version] (GPL5175) The Hospital for Sick Children 2011-02-13 Homo sapiens
Homo sapiens		 32,325,738
(316,919 x 102) 		102 by_platform
by_series
17 Comparison of B6/D2 Whole Brain Alternative Splicing (GSE27282) [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) Oregon Health & Science University 2011-02-14 Mus musculus
Mus musculus		 27,650,282
(1,256,831 x 22) 		22 by_platform
by_series
18 Genetic variation in radiation-induced cell death (GSE26835) [GeneChip] [HG-U133A_2] Affymetrix Human Genome U133A 2.0 Array (GPL571) Children's Hospital of Philadelphia 2011-01-24 Homo sapiens
Homo sapiens		 24,192,822
(22,277 x 1,086) 		1,086 by_platform
by_series
19 Gene expression changes in HK-2 cells following exposure to nephrotoxic compounds (GSE27211) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) UCD 2011-02-09 Homo sapiens
Homo sapiens		 23,947,650
(54,675 x 438) 		438 by_platform
by_series
20 Prospective comparison of genome-wide aCGH platforms for the detection of CNVs in MR (Mapping250K_Nsp and Mapping250K_Sty) (GSE27216) [GeneChip] [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array (GPL3718) University of British Columbia 2011-02-10 Homo sapiens
Homo sapiens		 23,610,420
(262,338 x 90) 		90 by_platform
by_series
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