Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(279)
  Primates
(0)
  Rodents
(126)
  Mammals
(16)
  Vertebrates
(9)
  Invertebrates
(19)
  Plants
(87)
  Bacteria
(50)
  Viruses
(0)
  Phages
(0)
  Unclassified
(6)
  All
(592)
 
  SAGE NlaIII
(2)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(2)
  GeneChip
(132)
  Tiling Array
(12)
  cDNA Array
(37)
  Oligo Array
(220)
  Bead Array
(113)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(74)
  Other
(0)
  All
(592)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Expression data from mouse ventral midbrain (GSE55119) [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) Korea University 2014-02-18 Mus musculus
Mus musculus
142,228
(35,557 x 4)
4 by_platform
by_series
2 Expression data from mouse B Cells with mir-155 KO and WT (GSE52940) [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) Hanyang University 2013-12-03 Mus musculus
Mus musculus
90,202
(45,101 x 2)
2 by_platform
by_series
3 Gene expression profiles in the spinal cord below the lesion level and influence of treadmill locomotor training (GSE52763) [GeneChip] [Rat230_2] Affymetrix Rat Genome 230 2.0 Array (GPL1355) Hae young Shin 2013-11-26 Rattus norvegicus
Rattus norvegicus
559,782
(31,099 x 18)
18 by_platform
by_series
4 Enhanced Direct Conversion into Hepatocyte-like Cells by Accelerated Sequential Epigenetic Events using Additional Stem Cell Factors (GSE52566) [GeneChip] [HT_MG-430_PM] Affymetrix HT MG-430 PM Array Plate (GPL11180) Konkuk University 2013-11-20 Mus musculus
Mus musculus
270,846
(45,141 x 6)
1 1 4 by_platform
by_series
5 Knockdown of EI24 in ZR-75-1 cells (GSE52508) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) Yonsei University 2013-11-19 Homo sapiens
Homo sapiens
266,376
(33,297 x 8)
8 by_platform
by_series
6 Genome wide analysis of transcriptome and microRNAs in early stage of Alzheimer’s disease (mRNA) (GSE52022) [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) Hanyang University 2013-11-02 Mus musculus
Mus musculus
360,808
(45,101 x 8)
8 by_platform
by_series
7 Genome wide analysis of transcriptome and microRNAs in early stage of Alzheimer's disease (GSE52024) [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) Hanyang University 2013-11-02 Mus musculus
Mus musculus
360,808
(45,101 x 8)
8 by_platform
by_series
8 Therapeutic potential of induced neural stem cells for spinal cord injury (GSE51331) [GeneChip] [HT_MG-430_PM] Affymetrix HT MG-430 PM Array Plate (GPL11180) Konkuk University 2013-09-30 Mus musculus
Mus musculus
135,423
(45,141 x 3)
1 1 1 by_platform
by_series
9 mRNA microarray analysis on HepG2 cells exposed to amorphous Silica Nanoparticles (SiO2-NP) (GSE51276) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) University of Seoul 2013-09-30 Homo sapiens
Homo sapiens
66,594
(33,297 x 2)
2 by_platform
by_series
10 Comparative gene expression analysis of the human periodontal ligament in deciduous and permanent teeth (GSE50640) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) Yonsei University College of Dentistry 2013-09-05 Homo sapiens
Homo sapiens
133,188
(33,297 x 4)
4 by_platform
by_series
11 Expression data from control siRNA and β-catenin siRNA transfected cultured mouse dermal cells (GSE50525) [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) Department of Immunology and Hair Research Center, School of Medicine Kyungpook National University 2013-09-02 Mus musculus
Mus musculus
71,114
(35,557 x 2)
2 by_platform
by_series
12 mRNA microarray analysis on HepG2 cells exposed to Grpahene oxide (GO) and reduced graphene oxide (rGO) Nanomaterials (GSE50039) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) University of Seoul 2013-08-20 Homo sapiens
Homo sapiens
99,891
(33,297 x 3)
3 by_platform
by_series
13 Microarray analysis of gene expression profile in MPTP-treated mouse retina: Comparative analysis of short-and long-term gene regulation (GSE49783) [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) East-West Medical Research Institute, Kyung Hee University 2013-08-11 Mus musculus
Mus musculus
284,456
(35,557 x 8)
8 by_platform
by_series
14 Reprogramming of mouse somatic cells into pluripotent stem cells using a combination of small molecules (GSE48411) [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) Korea University 2013-06-28 Mus musculus
Mus musculus
142,228
(35,557 x 4)
3 1 by_platform
by_series
15 DEG in human gastric carcinoma formed in stomach wall and metastasized to ovary in mice system (GSE47554) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) Samsung Medical Center 2013-05-31 Homo sapiens
Homo sapiens
133,188
(33,297 x 4)
4 by_platform
by_series
16 Predicting multi-class responses to preoperative chemoradiotherapy in rectal patients (GSE46862) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) Seoul National University 2013-05-13 Homo sapiens
Homo sapiens
2,297,493
(33,297 x 69)
69 by_platform
by_series
17 The transcriptional network for cell cycle regulation in prostate cancer (GSE45567) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [HuGene10stv1_Hs_ENTREZ, Brainarray v14] (GPL15034) Seoul National University College of Medicine 2013-03-27 Homo sapiens
Homo sapiens
355,338
(19,741 x 18)
18 by_platform
by_series
18 Expression data from early human B-cell development (GSE45460) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) Samsung Medical Center 2013-03-24 Homo sapiens
Homo sapiens
1,032,207
(33,297 x 31)
31 by_platform
by_series
19 A global DNA methylation and gene expression analysis of early human B-cell development reveals a demethylation signature and transcription factor network. (GSE45461) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) Samsung Medical Center 2013-03-24 Homo sapiens
Homo sapiens
1,032,207
(33,297 x 31)
31 by_platform
by_series
20 Effect of CCAR1 depletion on androgen-dependent gene expression in LNCaP cells (GSE45033) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) Sungkyunkwan University 2013-03-12 Homo sapiens
Homo sapiens
266,376
(33,297 x 8)
8 by_platform
by_series
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