Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(439)
  Primates
(2)
  Rodents
(190)
  Mammals
(12)
  Vertebrates
(10)
  Invertebrates
(58)
  Plants
(80)
  Bacteria
(82)
  Viruses
(1)
  Phages
(0)
  Unclassified
(1)
  All
(875)
 
  SAGE NlaIII
(3)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(261)
  Tiling Array
(19)
  cDNA Array
(487)
  Oligo Array
(103)
  Bead Array
(1)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(1)
  HT-Seq
(0)
  Other
(0)
  All
(875)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Identification of genes specifically over-expressed in lupus CD4 T and B cells (GSE4588) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) Université catholique de Louvain 2006-03-31 Homo sapiens
Homo sapiens
2,679,075
(54,675 x 49)
27 22 by_platform
by_series
2 Whole-genome expression profiling of melanoma progression. (GSE4587) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) University of Pittsburgh 2006-03-31 Homo sapiens
Homo sapiens
984,150
(54,675 x 18)
3 11 4 by_platform
by_series
3 Expression data from four cconsecutive stages of human B cell development (GSE4590) [GeneChip] [HG_U95A] Affymetrix Human Genome U95A Array (GPL91) Institute for medical microbiology 2006-03-31 Homo sapiens
Homo sapiens
252,520
(12,626 x 20)
20 by_platform
by_series
4 Reprogramming of CTLs into natural killer-like cells in celiac disease (GSE4592) [GeneChip] [HG-U133A] Affymetrix Human Genome U133A Array (GPL96) University of Chicago 2006-03-31 Homo sapiens
Homo sapiens
222,830
(22,283 x 10)
4 6 by_platform
by_series
5 Gene Expression Profiles of Multiple Myeloma (N=414) Before Treatment (GSE4581) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) Myeloma Institute for Research and Therapy 2006-03-30 Homo sapiens
Homo sapiens
22,635,450
(54,675 x 414)
414 by_platform
by_series
6 The zebrafish runzel mutant results in a novel muscular dystrophy phenotype due to a titin mutation (GSE4585) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) Harvard Medical School, Children's Hospital 2006-03-30 Danio rerio
Danio rerio
93,702
(15,617 x 6)
6 by_platform
by_series
7 Transcriptome analysis of A. nidulans growing in different carbon sources (GSE4578) [GeneChip] DTU/CMB_Aspergillusnidulans_9371_v1.0 (GPL3604) Technical University of Denmark 2006-03-30 Emericella nidulans
Emericella nidulans
84,339
(9,371 x 9)
9 by_platform
by_series
8 T4_bisthiazolium effect on the malaria parasite transcriptome (GSE4582) [GeneChip] SrcMalaria (Scripps/GNF 2002 affymetrix chip) (GPL3575) University of California 2006-03-30 Plasmodium falciparum 3D7
Plasmodium falciparum 3D7
51,590
(5,159 x 10)
10 by_platform
by_series
9 Gene expression signatures for predicting prognosis of squamous cell lung carcinomas (GSE4573) [GeneChip] [HG-U133A] Affymetrix Human Genome U133A Array (GPL96) Veridex, LLC 2006-03-29 Homo sapiens
Homo sapiens
2,896,790
(22,283 x 130)
130 by_platform
by_series
10 Expression profiling reveals novel pathways in the transformation of melanocytes to melanomas. (GSE4570) [GeneChip] [HG-U133A] Affymetrix Human Genome U133A Array (GPL96) Currently unaffilliated 2006-03-29 Homo sapiens
Homo sapiens
178,264
(22,283 x 8)
8 by_platform
by_series
11 Expression profiling of Treg cell versus their controls in human and mouse (GSE4571) [GeneChip] [MOE430A] Affymetrix Mouse Expression 430A Array (GPL339) HCI - Helmholtz Centre for Infection Research 2006-03-29 Mus musculus
Mus musculus
136,140
(22,690 x 6)
6 by_platform
by_series
12 Expression profiling of Treg cell versus their controls in human and mouse (GSE4571) [GeneChip] [HG-U133B] Affymetrix Human Genome U133B Array (GPL97) HCI - Helmholtz Centre for Infection Research 2006-03-29 Homo sapiens
Homo sapiens
90,580
(22,645 x 4)
4 by_platform
by_series
13 Expression profiling of Treg cell versus their controls in human and mouse (GSE4571) [GeneChip] [HG-U133A] Affymetrix Human Genome U133A Array (GPL96) HCI - Helmholtz Centre for Infection Research 2006-03-29 Homo sapiens
Homo sapiens
89,132
(22,283 x 4)
4 by_platform
by_series
14 A673 Ewing's sarcoma cells: stable-knockdown and inducible-rescue time course experiments (GSE4565) [GeneChip] [HG-U133A] Affymetrix Human Genome U133A Array (GPL96) Huntsman Cancer Institute 2006-03-28 Homo sapiens
Homo sapiens
512,509
(22,283 x 23)
23 by_platform
by_series
15 Endothelial cell culture with Chapel Hill Ultrafine particle (GSE4567) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) U.S. EPA 2006-03-28 Homo sapiens
Homo sapiens
437,400
(54,675 x 8)
8 by_platform
by_series
16 A673 inducible-rescue experiment (GSE4563) [GeneChip] [HG-U133A] Affymetrix Human Genome U133A Array (GPL96) Huntsman Cancer Institute 2006-03-28 Homo sapiens
Homo sapiens
334,245
(22,283 x 15)
15 by_platform
by_series
17 Gene expression signature of colorectal cancer with microsatellite instability. (GSE4554) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) University of Tokyo 2006-03-27 Homo sapiens
Homo sapiens
4,592,700
(54,675 x 84)
76 8 by_platform
by_series
18 Genes regulated in MPTP-treated macaques (GSE4550) [GeneChip] [HG-U133A] Affymetrix Human Genome U133A Array (GPL96) University of Eastern Finland 2006-03-27 Homo sapiens
Homo sapiens
1,470,678
(22,283 x 66)
53 13 by_platform
by_series
19 Inhibition of NOX1 Gene Expression with shRNA in Human Colon Cancer (GSE4561) [GeneChip] [HG-U133A_2] Affymetrix Human Genome U133A 2.0 Array (GPL571) City of Hope Compr. Cancer Center 2006-03-27 Homo sapiens
Homo sapiens
445,540
(22,277 x 20)
20 by_platform
by_series
20 experiment in midbrain primary cultures, enriched in dopaminergic neurons (GSE4551) [GeneChip] [RAE230A] Affymetrix Rat Expression 230A Array (GPL341) Istitute of genetics and biophysics 2006-03-27 Rattus norvegicus
Rattus norvegicus
191,076
(15,923 x 12)
12 by_platform
by_series
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