Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(228)
  SAGE RsaI
(1)
  SAGE Sau3A
(16)
  MPSS
(67)
  GeneChip
(19,582)
  Tiling Array
(4,015)
  cDNA Array
(5,993)
  Oligo Array
(14,254)
  Bead Array
(4,043)
  Protein Array
(1)
  Antibody
(43)
  RT-PCR
(338)
  HT-Seq
(7,682)
  Other
(247)
  All
(56,529)
 
1   |   2   |   3   |   4   |   5      »      [980]
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Integrated cell-to-cell signaling networks regulate vertebrate axis formation and left-right asymmetry (GSE17949) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) Stowers Institute for Medical Research 2009-09-03 Danio rerio
Danio rerio
1,124,424
(15,617 x 72)
72 by_platform
by_series
2 Transcriptome analysis of the zebrafish pineal gland (GSE13371) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) NIH 2008-10-27 Danio rerio
Danio rerio
1,077,573
(15,617 x 69)
69 by_platform
by_series
3 Gene expression data from time course of fin regeneration in Danio rerio (GSE37165) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) Mayo Clinic 2012-04-11 Danio rerio
Danio rerio
749,616
(15,617 x 48)
48 by_platform
by_series
4 Comparative Genomics Identifies Gene Targets for Retinoic Acid in the Embryonic Zebrafish Hearts (GSE9020) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) University of Wisconsin - Madison 2007-09-12 Danio rerio
Danio rerio
749,616
(15,617 x 48)
48 by_platform
by_series
5 Expression data from zebrafish (Danio rerio) embryos exposed to methyl tert-butyl ether (GSE46371) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) Oregon State University 2013-04-25 Danio rerio
Danio rerio
562,212
(15,617 x 36)
36 by_platform
by_series
6 Transcriptome analysis of zebrafish mononuclear myogenic cells (zMNCs) during myogenic differentiation (GSE19754) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) Boston Children's Hospital 2010-01-05 Danio rerio
Danio rerio
499,744
(15,617 x 32)
32 by_platform
by_series
7 Expression arrays of KRASG12D rhabdomyosarcoma models in zebrafish (GSE39731) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) Memorial Sloan Kettering Cancer Center 2012-07-30 Danio rerio
Danio rerio
499,744
(15,617 x 32)
32 by_platform
by_series
8 Transcriptional impact of organophosphate and metal mixtures on olfaction: copper dominates the chlorpyrifos-induced response in adult zebrafish. (GSE47039) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) University of Washington 2013-05-16 Danio rerio
Danio rerio
468,510
(15,617 x 30)
30 by_platform
by_series
9 Comparative genomic analysis between adult and larval fin regeneration (GSE10188) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) Oregon State University 2008-01-16 Danio rerio
Danio rerio
374,808
(15,617 x 24)
24 by_platform
by_series
10 AHR Activation by TCDD Downregulates Sox9b Expression Producing Jaw Malformation in Zebrafish Embryos (GSE11893) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) University of Wisconsin at Madison 2008-06-26 Danio rerio
Danio rerio
374,808
(15,617 x 24)
24 by_platform
by_series
11 FACS-Assisted Microarray Profiling Implicates Novel Genes and Pathways in Zebrafish Gastrointestinal Tract Development (GSE12189) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) University of Pittsburgh 2008-07-21 Danio rerio
Danio rerio
374,808
(15,617 x 24)
24 by_platform
by_series
12 Gene expression data from time course of fin regeneration in Danio rerio (part 1) (GSE37163) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) Mayo Clinic 2012-04-11 Danio rerio
Danio rerio
374,808
(15,617 x 24)
24 by_platform
by_series
13 Gene expression data from time course of fin regeneration in Danio rerio (part 2) (GSE37164) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) Mayo Clinic 2012-04-11 Danio rerio
Danio rerio
374,808
(15,617 x 24)
24 by_platform
by_series
14 Factorial Microarray Analysis of Zebrafish Retinal Development (GSE8874) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) Purdue University 2007-08-24 Danio rerio
Danio rerio
374,808
(15,617 x 24)
12 12 by_platform
by_series
15 Effect of starvation on the transcriptomes of the brain and liver in adult female zebrafish (Danio rerio) (GSE11107) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) University of Idaho 2008-04-09 Danio rerio
Danio rerio
281,106
(15,617 x 18)
8 10 by_platform
by_series
16 Isolation of single miRNA-expressing cells from zebrafish embryos (GSE12991) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) Whitehead Institute/MIT 2008-09-30 Danio rerio
Danio rerio
281,106
(15,617 x 18)
6 3 9 by_platform
by_series
17 The effect of cardiac troponin T2 knockdown on gene expression in zebrafish embryos (GSE16740) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) University of Sheffield 2009-06-22 Danio rerio
Danio rerio
281,106
(15,617 x 18)
18 by_platform
by_series
18 NMLF response to spinal cord injury in Zebrafish (GSE28470) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) Rutgers University 2011-04-08 Danio rerio
Danio rerio
281,106
(15,617 x 18)
18 by_platform
by_series
19 Expression data from early Zebrafish embryos after knockdown of mir-34 (GSE32360) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) INSTITUTE OF GENOMICS AND INTEGRATIVE BIOLOGY 2011-09-23 Danio rerio
Danio rerio
281,106
(15,617 x 18)
18 by_platform
by_series
20 1, 3, or 5 Day Post Amputation Vehicle or TCDD Exposed (GSE3667) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) Oregon State University 2005-11-23 Danio rerio
Danio rerio
281,106
(15,617 x 18)
18 by_platform
by_series
1   |   2   |   3   |   4   |   5      »      [980]