Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(279)
  Primates
(0)
  Rodents
(126)
  Mammals
(16)
  Vertebrates
(9)
  Invertebrates
(19)
  Plants
(87)
  Bacteria
(50)
  Viruses
(0)
  Phages
(0)
  Unclassified
(6)
  All
(592)
 
  SAGE NlaIII
(2)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(2)
  GeneChip
(132)
  Tiling Array
(12)
  cDNA Array
(37)
  Oligo Array
(220)
  Bead Array
(113)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(74)
  Other
(0)
  All
(592)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 mRNA microarray analysis on young adult zebrafish exposed to benzene, toluene, formaldehyde and a BTF mix (GSE24846) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) University of Seoul 2010-10-20 Danio rerio
Danio rerio
78,085
(15,617 x 5)
5 by_platform
by_series
2 mRNA microarray analysis on young adult Caenorhabditis elegans, Drosophila melanogaster, and Danio rerio exposed to benzene, toluene, and formaldehyde (GSE24923) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) University of Seoul 2010-10-25 Danio rerio
Danio rerio
78,085
(15,617 x 5)
5 by_platform
by_series
3 Time-course expression data during assurance of the chronological longevity by caloric restriction in budding yeast (GSE41860) [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) Korea University 2012-10-26 Saccharomyces,unidentified
Saccharomyces,unidentified
262,272
(10,928 x 24)
24 by_platform
by_series
4 Transcriptomes for different level of glucose (GSE9217) [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) Korea University 2007-10-03 Saccharomyces cerevisiae
Saccharomyces cerevisiae
131,136
(10,928 x 12)
12 by_platform
by_series
5 Gene Expression Profiling of Ulcerative Colitis (GSE3801) [GeneChip] [U133_X3P] Affymetrix Human X3P Array (GPL1352) University of Ulsan College of Medicine 2005-12-12 Homo sapiens
Homo sapiens
122,718
(61,359 x 2)
1 1 by_platform
by_series
6 Expression data from clinical S. aureus strains (GSE44268) [GeneChip] [S_aureus] Affymetrix S. aureus Genome Array (GPL1339) AmorePacific Co. 2013-02-12 Staphylococcus aureus
Staphylococcus aureus
62,200
(7,775 x 8)
8 by_platform
by_series
7 Expression data from Staphylococcus aureus ATCC 25923 (antibiotic sensitive) and ATCC 33591 (MRSA) (GSE18289) [GeneChip] [S_aureus] Affymetrix S. aureus Genome Array (GPL1339) SNU 2009-09-25 Staphylococcus aureus
Staphylococcus aureus
46,650
(7,775 x 6)
6 by_platform
by_series
8 Depolarization induced gene from primary cortical neuron (GSE4472) [GeneChip] [RN_U34] Affymetrix Rat Neurobiology U34 Array (GPL88) College of Medicine, Korea university 2006-03-15 Rattus norvegicus
Rattus norvegicus
5,288
(1,322 x 4)
4 by_platform
by_series
9 Methanol is an endogenous elicitor molecule upon senescence of detached rice leaves (GSE26387) [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) Chonnam National University 2011-01-02 Oryza sativa
Oryza sativa
172,143
(57,381 x 3)
3 by_platform
by_series
10 Discriminant for genotoxic and non-genotoxic carcinogens by differentially expressed gene profiling (GSE31307) [GeneChip] [Rat230_2] Affymetrix Rat Genome 230 2.0 Array (GPL1355) Seoul Nat'l Univ. 2011-08-10 Rattus norvegicus
Rattus norvegicus
2,021,435
(31,099 x 65)
65 by_platform
by_series
11 Transcriptional profiles of psychostimulant reinforcement in rats (GSE43748) [GeneChip] [Rat230_2] Affymetrix Rat Genome 230 2.0 Array (GPL1355) Seoul National University 2013-01-25 Rattus norvegicus
Rattus norvegicus
1,959,237
(31,099 x 63)
63 by_platform
by_series
12 Gene expression profiles in the spinal cord below the lesion level and influence of treadmill locomotor training (GSE52763) [GeneChip] [Rat230_2] Affymetrix Rat Genome 230 2.0 Array (GPL1355) Hae young Shin 2013-11-26 Rattus norvegicus
Rattus norvegicus
559,782
(31,099 x 18)
18 by_platform
by_series
13 Identification of Sox10 target genes by comparative expression profiling (GSE12007) [GeneChip] [Rat230_2] Affymetrix Rat Genome 230 2.0 Array (GPL1355) Ewha Womans University 2008-07-04 Rattus norvegicus
Rattus norvegicus
124,396
(31,099 x 4)
4 by_platform
by_series
14 Osmolality as a major regulator of the transcriptome and metabolome in kidney collecting duct cells (GSE35598) [GeneChip] [RaGene-1_0-st] Affymetrix Rat Gene 1.0 ST Array [transcript (gene) version] (GPL6247) Kyungpook National University 2012-02-07 Rattus norvegicus
Rattus norvegicus
350,580
(29,215 x 12)
12 by_platform
by_series
15 Changes of mRNA expressin in rat kidney inner medulla in response to dDAVP stimulation/ withdrawal (GSE27449) [GeneChip] [RaGene-1_0-st] Affymetrix Rat Gene 1.0 ST Array [transcript (gene) version] (GPL6247) School of Medicine, Kyungpook National University 2011-02-22 Rattus norvegicus
Rattus norvegicus
175,290
(29,215 x 6)
6 by_platform
by_series
16 Effects of dietary fat types on growth performance, pork quality, and gene expression in growing-finishing pigs (GSE38146) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) National Institute of Animal Science 2012-05-22 Sus scrofa
Sus scrofa domestica
578,952
(24,123 x 24)
24 by_platform
by_series
17 Comparison between skeletal transcriptomes of Korean native pig and Yorkshire (GSE18653) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Korea University 2009-10-20 Sus scrofa
Sus scrofa domestica
192,984
(24,123 x 8)
8 by_platform
by_series
18 Comparison between liver transcriptomes of Korean native pig and Yorkshire (GSE21408) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Korea University 2010-04-20 Sus scrofa
Sus scrofa domestica
192,984
(24,123 x 8)
8 by_platform
by_series
19 KNP_vs_YS_Fat (GSE9333) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Korea University 2007-10-16 Sus scrofa
Sus scrofa domestica
192,984
(24,123 x 8)
8 by_platform
by_series
20 Expression data from porcine embryonic stem cells (GSE32506) [GeneChip] [Porcine] Affymetrix Porcine Genome Array (GPL3533) Seoul National University 2011-09-30 Sus scrofa
Sus scrofa domestica
72,369
(24,123 x 3)
3 by_platform
by_series
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