Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(1,101)
  Primates
(16)
  Rodents
(276)
  Mammals
(21)
  Vertebrates
(0)
  Invertebrates
(212)
  Plants
(690)
  Bacteria
(167)
  Viruses
(0)
  Phages
(0)
  Unclassified
(20)
  All
(2,522)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(804)
  Tiling Array
(6)
  cDNA Array
(575)
  Oligo Array
(966)
  Bead Array
(151)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(20)
  Other
(0)
  All
(2,522)
 
  brain
(41)
  blood
(49)
  connective
(44)
  reproductive
(5)
  muscular
(0)
  digestive
(0)
  liver
(6)
  lung
(6)
  urinary
(1)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(54)
  young aerial structure
(85)
  root
(39)
  meristem/growing tissue
(12)
  flower/sexual organ
(86)
  seed/fruit/grain
(33)
  pooled
(9)
  unclassified
(334)
  all
(804)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM669693 Heat-shock_Sense-array_biological-rep1 1,384,231 Institute Of Genomics and Integrative Biology 2011-02-07 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
skin HeLa cell line, Heat-shock treated
2 GSM669696 Heat-shock_Sense-array_biological-rep2 1,384,231 Institute Of Genomics and Integrative Biology 2011-02-07 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
skin HeLa cell line, Heat-shock treated
3 GSM669793 Heat-shock_AntiSense-array_biological-rep1 1,384,231 Institute Of Genomics and Integrative Biology 2011-02-07 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
skin HeLa cell line, Heat-shock treated
4 GSM669794 Heat-shock_AntiSense-array_biological-rep2 1,384,231 Institute Of Genomics and Integrative Biology 2011-02-07 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
skin HeLa cell line, Heat-shock treated
5 GSM670092 Untreated_Sense-array_biological-rep1 1,384,231 Institute Of Genomics and Integrative Biology 2011-02-07 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
skin HeLa cell line, untreated control
6 GSM670093 Untreated_Sense-array_biological-rep2 1,384,231 Institute Of Genomics and Integrative Biology 2011-02-07 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
skin HeLa cell line, untreated control
7 GSM670106 Untreated_AntiSense-array_biological-rep1 1,384,231 Institute Of Genomics and Integrative Biology 2011-02-07 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
skin HeLa cell line, untreated control
8 GSM670125 Untreated_AntiSense-array_biological-rep2 1,384,231 Institute Of Genomics and Integrative Biology 2011-02-07 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
skin HeLa cell line, untreated control
9 GSM785129 JEG-3_Control_24h 65,535 National Institue of Immunology 2011-08-23 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
placenta JEG-3 cells cultured for 24 h without any kind of exogenous treatment
10 GSM785130 JEG-3_IL11_24h 65,535 National Institue of Immunology 2011-08-23 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
placenta JEG-3 cells stimulated with IL-11 (200ng/ml) for 24 h
11 GSM785131 HTR-8/SVneo_Control_24h 65,535 National Institue of Immunology 2011-08-23 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
peripheral blood Gene expression data from HTR-8/SVneo cells cultured for 24 h in the medium without fetal bovine serum
12 GSM785132 HTR-8/SVneo_IL11_24h 65,535 National Institue of Immunology 2011-08-23 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
peripheral blood Gene expression data from HTR-8/SVneo cells cultured for 24 h in the medium without fetal bovine serum and stimulated with IL-11 (200 ng/ml)
13 GSM883640 JEG-3_Control 65,535 National Institue of Immunology 2012-03-01 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
placenta JEG-3 cells cultured for 24 h without any kind of exogenous treatment
14 GSM883641 JEG-3_LIF 65,535 National Institue of Immunology 2012-03-01 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
placenta JEG-3 cells stimulated with LIF (50 ng/ml) for 24 h
15 GSM883642 JEG-3_IL6 65,535 National Institue of Immunology 2012-03-01 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
placenta JEG-3 cells stimulated with IL-6 (100ng/ml) for 24 h
16 GSM883643 HTR-8/SVneo_Control_24h 65,535 National Institue of Immunology 2012-03-01 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
peripheral blood Gene expression data from HTR-8/SVneo cells cultured for 24 h in medium without fetal bovine serum.
17 GSM883644 HTR-8/SVneo_LIF 65,535 National Institue of Immunology 2012-03-01 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
peripheral blood Gene expression data from HTR-8/SVneo cells cultured for 24 h in medium without fetal bovine serum and stimulated with LIF (50 ng/ml).
18 GSM883645 HTR-8/SVneo_IL6 65,535 National Institue of Immunology 2012-03-01 [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) RNA Homo sapiens
Homo sapiens
peripheral blood Gene expression data from HTR-8/SVneo cells cultured for 24 h in medium without fetal bovine serum and stimulated with IL-6 (100 ng/ml).
19 GSM754875 WL711 (Drought susceptible) irrigated condition rep 1 61,290 NRCPb 2011-07-06 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
unclassified source_name:WL711_Drought_Susceptible_irrigated_condition title:WL711 (Drought susceptible) irrigated condition rep 1 description:Gene expression profile of drought susceptible wheat cultivar in irrigated condition
20 GSM754876 WL711 (Drought susceptible) irrigated condition rep 2 61,290 NRCPb 2011-07-06 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Triticum aestivum
Triticum aestivum
unclassified source_name:WL711_Drought_Susceptible_irrigated_condition title:WL711 (Drought susceptible) irrigated condition rep 2 description:Gene expression profile of drought susceptible wheat cultivar in irrigated condition
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