Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(1,697)
  SAGE RsaI
(3)
  SAGE Sau3A
(54)
  MPSS
(507)
  GeneChip
(441,758)
  Tiling Array
(24,730)
  cDNA Array
(109,124)
  Oligo Array
(288,250)
  Bead Array
(148,432)
  Protein Array
(5)
  Antibody
(1,287)
  RT-PCR
(6,509)
  HT-Seq
(64,850)
  Other
(13,899)
  All
(1,101,311)
 
  brain
(39,467)
  blood
(94,139)
  connective
(26,746)
  reproductive
(19,199)
  muscular
(15,729)
  digestive
(16,372)
  liver
(20,499)
  lung
(19,606)
  urinary
(11,788)
  endo/exo-crine
(31,615)
  embryo
(8,093)
  adult aerial structure
(4,521)
  young aerial structure
(5,718)
  root
(2,417)
  meristem/growing tissue
(1,354)
  flower/sexual organ
(1,302)
  seed/fruit/grain
(1,610)
  pooled
(25,959)
  unclassified
(95,624)
  all
(441,758)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM191095 P3_AS_HDF_RCyP+_C01_B1 3,030,290 Affymetrix, Inc. 2007-05-23 [GeneChip] AFFY Human Phase3 v1.0 - C01 (GPL5234) RNA Homo sapiens
Homo sapiens
unclassified source_name:Total RNA from HDF cell line title:P3_AS_HDF_RCyP+_C01_B1 description:See publication for details
2 GSM191917 P3_AS_HepG2_RCyP+_C01_B1 3,030,290 Affymetrix, Inc. 2007-05-23 [GeneChip] AFFY Human Phase3 v1.0 - C01 (GPL5234) RNA Homo sapiens
Homo sapiens
liver/hepato Total Cytoplasmic RNA from HepG2 cell line
3 GSM192190 P3_AS_HepG2_RNuP+_C01_B1 3,030,290 Affymetrix, Inc. 2007-05-23 [GeneChip] AFFY Human Phase3 v1.0 - C01 (GPL5234) RNA Homo sapiens
Homo sapiens
liver/hepato Total Nuclear RNA from HepG2 cell line
4 GSM192460 P3_AS_Jur_RCyP+_C01_B1 3,030,290 Affymetrix, Inc. 2007-05-23 [GeneChip] AFFY Human Phase3 v1.0 - C01 (GPL5234) RNA Homo sapiens
Homo sapiens
lymphnode Total RNA from Jurkat cell line
5 GSM192733 P3_AS_NCC_RCyP+_C01_B1 3,030,290 Affymetrix, Inc. 2007-05-23 [GeneChip] AFFY Human Phase3 v1.0 - C01 (GPL5234) RNA Homo sapiens
Homo sapiens
unclassified source_name:Total RNA from NCCIT cell line title:P3_AS_NCC_RCyP+_C01_B1 description:See publication for details
6 GSM193006 P3_AS_PC3_RCyP+_C01_B1 3,030,290 Affymetrix, Inc. 2007-05-23 [GeneChip] AFFY Human Phase3 v1.0 - C01 (GPL5234) RNA Homo sapiens
Homo sapiens
prostate Total RNA from PC3 cell line
7 GSM191368 P3_AS_HeLaS3_RCyP+_C01_B1 3,029,619 Affymetrix, Inc. 2007-05-23 [GeneChip] AFFY Human Phase3 v1.0 - C01 (GPL5234) RNA Homo sapiens
Homo sapiens
skin Total Cytoplasmic RNA from HeLa cell line
8 GSM191644 P3_AS_HeLaS3_RNuP+_C01_B1 3,029,619 Affymetrix, Inc. 2007-05-23 [GeneChip] AFFY Human Phase3 v1.0 - C01 (GPL5234) RNA Homo sapiens
Homo sapiens
skin Total Nuclear RNA from HeLa cell line
9 GSM193279 P3_AS_SK_RCyP+_C01_B1 3,029,619 Affymetrix, Inc. 2007-05-23 [GeneChip] AFFY Human Phase3 v1.0 - C01 (GPL5234) RNA Homo sapiens
Homo sapiens
cerebrum Total RNA from SK-N-AS cell line
10 GSM193549 P3_AS_U87_RCyP+_C01_B1 3,029,619 Affymetrix, Inc. 2007-05-23 [GeneChip] AFFY Human Phase3 v1.0 - C01 (GPL5234) RNA Homo sapiens
Homo sapiens
corpus callosum/glia Total RNA from U87MG cell line
11 GSM216709 P3_AS_HepG2_sRW_C01_T1 2,996,213 Affymetrix, Inc. 2007-08-09 [GeneChip] AFFY Human Phase3 v1.0 - C01 (GPL5234) RNA Homo sapiens
Homo sapiens
liver/hepato Whole-cell short RNA from HepG2 cell line
12 GSM217083 P3_S_HepG2_sRW_C01_T1 2,996,213 Affymetrix, Inc. 2007-08-10 [GeneChip] AFFY Human Phase3 v1.0 - C01 (GPL5234) RNA Homo sapiens
Homo sapiens
liver/hepato Whole-cell short RNA from HepG2 cell line
13 GSM216560 P3_AS_HeLa_sRW_C01_T1 2,996,037 Affymetrix, Inc. 2007-08-09 [GeneChip] AFFY Human Phase3 v1.0 - C01 (GPL5234) RNA Homo sapiens
Homo sapiens
skin Whole cell RNA from HeLa cell line
14 GSM216984 P3_S_HeLa_sRW_C01_T1 2,996,037 Affymetrix, Inc. 2007-08-09 [GeneChip] AFFY Human Phase3 v1.0 - C01 (GPL5234) RNA Homo sapiens
Homo sapiens
skin Whole-cell short RNA from HeLa cell line
15 GSM191098 P3_AS_HDF_RCyP+_C02_B1 3,417,013 Affymetrix, Inc. 2007-05-23 [GeneChip] AFFY Human Phase3 v1.0 - C02 (GPL5235) RNA Homo sapiens
Homo sapiens
unclassified source_name:Total RNA from HDF cell line title:P3_AS_HDF_RCyP+_C02_B1 description:See publication for details
16 GSM191920 P3_AS_HepG2_RCyP+_C02_B1 3,417,013 Affymetrix, Inc. 2007-05-23 [GeneChip] AFFY Human Phase3 v1.0 - C02 (GPL5235) RNA Homo sapiens
Homo sapiens
liver/hepato Total Cytoplasmic RNA from HepG2 cell line
17 GSM192193 P3_AS_HepG2_RNuP+_C02_B1 3,417,013 Affymetrix, Inc. 2007-05-23 [GeneChip] AFFY Human Phase3 v1.0 - C02 (GPL5235) RNA Homo sapiens
Homo sapiens
liver/hepato Total Nuclear RNA from HepG2 cell line
18 GSM192463 P3_AS_Jur_RCyP+_C02_B1 3,417,013 Affymetrix, Inc. 2007-05-23 [GeneChip] AFFY Human Phase3 v1.0 - C02 (GPL5235) RNA Homo sapiens
Homo sapiens
lymphnode Total RNA from Jurkat cell line
19 GSM192736 P3_AS_NCC_RCyP+_C02_B1 3,417,013 Affymetrix, Inc. 2007-05-23 [GeneChip] AFFY Human Phase3 v1.0 - C02 (GPL5235) RNA Homo sapiens
Homo sapiens
unclassified source_name:Total RNA from NCCIT cell line title:P3_AS_NCC_RCyP+_C02_B1 description:See publication for details
20 GSM193009 P3_AS_PC3_RCyP+_C02_B1 3,417,013 Affymetrix, Inc. 2007-05-23 [GeneChip] AFFY Human Phase3 v1.0 - C02 (GPL5235) RNA Homo sapiens
Homo sapiens
prostate Total RNA from PC3 cell line
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