Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(2,904)
  Primates
(0)
  Rodents
(367)
  Mammals
(76)
  Vertebrates
(2)
  Invertebrates
(221)
  Plants
(938)
  Bacteria
(296)
  Viruses
(0)
  Phages
(0)
  Unclassified
(47)
  All
(4,851)
 
  SAGE NlaIII
(13)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(697)
  Tiling Array
(9)
  cDNA Array
(2,791)
  Oligo Array
(1,269)
  Bead Array
(12)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(60)
  Other
(0)
  All
(4,851)
 
  brain
(0)
  blood
(59)
  connective
(10)
  reproductive
(85)
  muscular
(80)
  digestive
(15)
  liver
(28)
  lung
(90)
  urinary
(3)
  endo/exo-crine
(65)
  embryo
(13)
  adult aerial structure
(46)
  young aerial structure
(12)
  root
(0)
  meristem/growing tissue
(24)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(167)
  all
(697)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1218359 35S::BiP-4 irrigated, biological rep1 61,170 Universidade Federal de Viçosa 2013-08-28 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
leaf soybean transgenic leaves under normal irrigation
2 GSM1218360 35S::BiP-4 irrigated, biological rep2 61,170 Universidade Federal de Viçosa 2013-08-28 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
leaf soybean transgenic leaves under normal irrigation
3 GSM1218361 WT irrigated, biological rep1 61,170 Universidade Federal de Viçosa 2013-08-28 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
leaf soybean WT leaves under normal irrigation
4 GSM1218362 WT irrigated, biological rep2 61,170 Universidade Federal de Viçosa 2013-08-28 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
leaf soybean WT leaves under normal irrigation
5 GSM1218363 35S::BiP-4 (ψw=-1.0) 21d, biological rep1 61,170 Universidade Federal de Viçosa 2013-08-28 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
leaf soybean transgenic leaves ψw=-1.0 of dehydration
6 GSM1218364 35S::BiP-4 (ψw=-1.0) 21d, biological rep2 61,170 Universidade Federal de Viçosa 2013-08-28 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
leaf soybean transgenic leaves ψw=-1.0 of dehydration
7 GSM1218365 WT(ψw=-1.0) 19d, biological rep1 61,170 Universidade Federal de Viçosa 2013-08-28 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
leaf soybean WT leaves ψw=-1.0 of dehydration
8 GSM1218366 WT(ψw=-1.0) 19d, biological rep2 61,170 Universidade Federal de Viçosa 2013-08-28 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
leaf soybean WT leaves ψw=-1.0 of dehydration
9 GSM1218367 WT(ψw=-1.7) 23d, biological rep1 61,170 Universidade Federal de Viçosa 2013-08-28 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
leaf soybean WT leaves ψw=-1.7 of dehydration
10 GSM1218368 WT(ψw=-1.7) 23d, biological rep2 61,170 Universidade Federal de Viçosa 2013-08-28 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
leaf soybean WT leaves ψw=-1.7 of dehydration
11 GSM1218369 35S::BiP-4 (ψw=-1.6) 25d, biological rep1 61,170 Universidade Federal de Viçosa 2013-08-28 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
leaf soybean transgenic leaves ψw=-1.6 of dehydration
12 GSM1218370 35S::BiP-4 (ψw=-1.6) 25d, biological rep2 61,170 Universidade Federal de Viçosa 2013-08-28 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
leaf soybean transgenic leaves ψw=-1.6 of dehydration
13 GSM1218371 WT(ψw=-2.0) 25d, biological rep1 61,170 Universidade Federal de Viçosa 2013-08-28 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
leaf soybean WT leaves ψw=-2.0 of dehydration
14 GSM1218372 WT(ψw=-2.0) 25d, biological rep2 61,170 Universidade Federal de Viçosa 2013-08-28 [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) RNA Glycine max
Glycine max
leaf soybean WT leaves ψw=-2.0 of dehydration
15 GSM1092119 lung_not_treated_rep1 45,101 University of Sao Paulo 2013-03-04 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
lung Lung from Infected mice not treated
16 GSM1092120 lung_not_treated_rep2 45,101 University of Sao Paulo 2013-03-04 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
lung Lung from Infected mice not treated
17 GSM1092121 lung_not_treated_rep3 45,101 University of Sao Paulo 2013-03-04 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
lung Lung from Infected mice not treated
18 GSM1092122 lung_immunotherapy_rep1 45,101 University of Sao Paulo 2013-03-04 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
lung Lung from Infected mice that received DNAhsp65 immunotherapy
19 GSM1092123 lung_immunotherapy_rep2 45,101 University of Sao Paulo 2013-03-04 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
lung Lung from Infected mice that received DNAhsp65 immunotherapy
20 GSM1092124 lung_immunotherapy_rep3 45,101 University of Sao Paulo 2013-03-04 [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) RNA Mus musculus
Mus musculus
lung Lung from Infected mice that received DNAhsp65 immunotherapy
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