Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)
  Primates
(199)
  Rodents
(12,016)
  Mammals
(754)
  Vertebrates
(1,115)
  Invertebrates
(3,796)
  Plants
(6,479)
  Bacteria
(2,920)
  Viruses
(51)
  Phages
(4)
  Unclassified
(249)
  All
(45,516)
 
  SAGE NlaIII
(224)
  SAGE RsaI
(1)
  SAGE Sau3A
(16)
  MPSS
(56)
  GeneChip
(16,580)
  Tiling Array
(3,529)
  cDNA Array
(5,792)
  Oligo Array
(11,628)
  Bead Array
(2,848)
  Protein Array
(1)
  Antibody
(37)
  RT-PCR
(223)
  HT-Seq
(4,411)
  Other
(158)
  All
(45,516)
 
1   |   2   |   3   |   4   |   5      »      [221]
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Conservation of small RNA pathways in platypus (GSE10571) [HT Sequencing] Illumina Genome Analyzer (Tachyglossus aculeatus) (GPL11058) Cold Spring Harbor Laboratory 2008-02-19 Tachyglossus aculeatus
Tachyglossus aculeatus
1
(0 x 1)
1 by_platform
by_series
2 Drosophila melanogaster small RNA sequence: female heads (GSE10790) [HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058) Sloan-Kettering Institute 2008-03-11 Drosophila melanogaster
Drosophila melanogaster
1
(0 x 1)
1 by_platform
by_series
3 The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing (GSE11209) [HT Sequencing] Yale-Illumina-Yeast-RNA-Seq (GPL6750) Yale University 2008-04-17 Saccharomyces cerevisiae
Saccharomyces cerevisiae
1
(0 x 1)
1 by_platform
by_series
4 siRNAs 15-29 nucleotides long with 100 percent hit to Cocksfoot streak virus (GSE12052) [HT Sequencing] 454 GS (Cocksfoot streak virus) (GPL9382) CEH Oxford 2008-07-09 Cocksfoot streak virus
Cocksfoot streak virus
1
(0 x 1)
1 by_platform
by_series
5 siRNAs 15-29 nucleotides long with 100 percent hit to Turnip mosaic virus clone GBR98 (GSE12053) [HT Sequencing] 454 GS (Turnip mosaic virus) (GPL9383) CEH Oxford 2008-07-09 Turnip mosaic virus
Turnip mosaic virus
1
(0 x 1)
1 by_platform
by_series
6 Analysis of small RNAs in murine neutrophils by Solexa/Illumina genome analyzer (GSE12074) [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) Whitehead Institute 2008-07-10 Mus musculus
Mus musculus
1
(0 x 1)
1 by_platform
by_series
7 The impact of microRNAs on protein output (GSE12075) [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) Whitehead Institute 2008-07-10 Mus musculus
Mus musculus
1
(0 x 1)
1 by_platform
by_series
8 The Early Origins and Evolution of microRNAs and piRNAs in Animals (GSE12578) [HT Sequencing] Illumina Genome Analyzer (Trichoplax adhaerens) (GPL9305) Whitehead Institute 2008-08-26 Trichoplax adhaerens
Trichoplax adhaerens
1
(0 x 1)
1 by_platform
by_series
9 The Early Origins and Evolution of microRNAs and piRNAs in Animals (GSE12578) [HT Sequencing] Illumina Genome Analyzer (Monosiga brevicollis) (GPL9306) Whitehead Institute 2008-08-26 Monosiga brevicollis
Monosiga brevicollis
1
(0 x 1)
1 by_platform
by_series
10 Divergent transcription from active promoters (GSE12680) [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) Whitehead Institute 2008-09-05 Mus musculus
Mus musculus
1
(0 x 1)
1 by_platform
by_series
11 Chip-seq from MEF cells H3K27me3 (GSE12721) [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) CeMM 2008-09-10 Mus musculus
Mus musculus
1
(0 x 1)
1 by_platform
by_series
12 The DNA-Encoded Nucleosome Organization of a Eukaryotic Genome (GSE13622) [HT Sequencing] Illumina Genome Analyzer II (synthetic construct) (GPL9423) University of Toronto 2008-11-17 synthetic construct
synthetic construct
1
(0 x 1)
1 by_platform
by_series
13 A distinct class of small RNAs arises from pre-miRNA-proximal regions in a simple chordate (GSE13625) [HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058) MIT CSAIL 2008-11-17 Drosophila melanogaster
Drosophila melanogaster
1
(0 x 1)
1 by_platform
by_series
14 Drosophila pseudoobscura and Drosophila simulans small RNAs (GSE13677) [HT Sequencing] Illumina Genome Analyzer (Drosophila simulans) (GPL9394) Hubrecht Institute 2008-11-19 Drosophila simulans
Drosophila simulans
1
(0 x 1)
1 by_platform
by_series
15 Drosophila melanogaster S2-GMR cells, second biological replicate (GSE14488) [HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058) Memorial Sloan Kettering Cancer Center 2009-01-21 Drosophila melanogaster
Drosophila melanogaster
1
(0 x 1)
1 by_platform
by_series
16 small RNA from S2 cells (S2-NP) (GSE14849) [HT Sequencing] Illumina Genome Analyzer (Drosophila melanogaster) (GPL9058) Memorial Sloan Kettering Cancer Center 2009-02-16 Drosophila melanogaster
Drosophila melanogaster
1
(0 x 1)
1 by_platform
by_series
17 FLX sequencing of Piwi-associated small RNAs extracted from Drosophila ovarian somatic cells (OSC) (GSE15137) [HT Sequencing] 454 GS FLX (Drosophila melanogaster) (GPL9333) National Institute of Advanced Industrial Science and Technology 2009-03-06 Drosophila melanogaster
Drosophila melanogaster
1
(0 x 1)
1 by_platform
by_series
18 Specialized piRNA pathways act in germline and somatic tissues of the Drosophila ovary (GSE15186) [HT Sequencing] Illumina Genome Analyzer II (Drosophila erecta) (GPL9321) NYU Medical Center 2009-03-11 Drosophila erecta
Drosophila erecta
1
(0 x 1)
1 by_platform
by_series
19 Metatranscriptomic analysis of an anaerobic ammonium oxidizing community dominated by Kuenenia stuttgartiensis (GSE15408) [HT Sequencing] Illumina Genome Analyzer II (Candidatus Kuenenia stuttgartiensis) (GPL9338) MPI Bremen 2009-03-26 Candidatus Kuenenia stuttgartiensis
Candidatus Kuenenia stuttgartiensis
1
(0 x 1)
1 by_platform
by_series
20 High-throughput sequencing of small RNAs in chicken somite embryos (GSE15513) [HT Sequencing] Illumina Genome Analyzer II (Gallus gallus) (GPL9385) University of East Anglia 2009-04-02 Gallus gallus
Gallus gallus
1
(0 x 1)
1 by_platform
by_series
1   |   2   |   3   |   4   |   5      »      [221]