Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(228)
  SAGE RsaI
(1)
  SAGE Sau3A
(16)
  MPSS
(67)
  GeneChip
(19,582)
  Tiling Array
(4,015)
  cDNA Array
(5,993)
  Oligo Array
(14,254)
  Bead Array
(4,043)
  Protein Array
(1)
  Antibody
(43)
  RT-PCR
(338)
  HT-Seq
(7,682)
  Other
(247)
  All
(56,529)
 
1   |   2   |   3   |   4   |   5      »      [385]
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 RNAseq to investigate transcriptional changes in human MM cell lines due to panobinostat, 5-Azacytidine, panobinostat+5-Azacytidine or n-methyl-2-pyrroldine (NMP) treatments. (GSE56623) [HT Sequencing] Illumina HiSeq 2500 (Homo sapiens) (GPL16791) Peter MacCallum Cancer Centre 2014-04-08 Homo sapiens
Homo sapiens
60
(0 x 60)
60 by_platform
by_series
2 Different miRNA expression profiles between human breast cancer turmors and serum (GSE56614) [HT Sequencing] Illumina HiSeq 2500 (Homo sapiens) (GPL16791) Wenzhou Medical University 2014-04-08 Homo sapiens
Homo sapiens
4
(0 x 4)
1 3 by_platform
by_series
3 Quantitative sequencing of 5-formylcytosine in DNA at single-base resolution (GSE56572) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) CRUK Cambridge Institute 2014-04-07 Mus musculus
Mus musculus
12
(0 x 12)
12 by_platform
by_series
4 ER and RNA PolII ChIP-seq in WT and ER mutant mouse uterus (GSE56501) [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) NIEHS 2014-04-03 Mus musculus
Mus musculus
5
(0 x 5)
5 by_platform
by_series
5 The histone methyltransferase activity of MLL1 is dispensable for hematopoiesis and leukemogenesis (GSE56456) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) Geisel School of Medicine at Dartmouth 2014-04-02 Mus musculus
Mus musculus
11
(0 x 11)
11 by_platform
by_series
6 Nuclear pore complex evolution: A trypanosome Mlp analog functions in chromosomal segregation but lacks transcriptional barrier activity (GSE56436) [HT Sequencing] Illumina Genome Analyzer (Trypanosoma brucei) (GPL18516) Seattle BioMed 2014-04-02 Trypanosoma brucei
Trypanosoma brucei
3
(0 x 3)
3 by_platform
by_series
7 Transcriptional landscape of Rag2 -/- thymocytes (GSE56395) [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) University of Birmingham 2014-04-01 Mus musculus
Mus musculus
18
(0 x 18)
18 by_platform
by_series
8 Transcriptional landscape of Rag2 -/- thymocytes [ChIP-Seq] (GSE56393) [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) University of Birmingham 2014-04-01 Mus musculus
Mus musculus
17
(0 x 17)
17 by_platform
by_series
9 Transcriptional landscape of Rag2 -/- thymocytes (GSE56395) [HT Sequencing] AB SOLiD 4 System (Mus musculus) (GPL14602) University of Birmingham 2014-04-01 Mus musculus
Mus musculus
3
(0 x 3)
3 by_platform
by_series
10 Haemophilus parasuis F9 transcriptome in biofilm and planktonic cultures using RNA sequencing (GSE56428) [HT Sequencing] Ion Torrent PGM (Haemophilus parasuis) (GPL18514) CReSA 2014-04-01 Haemophilus parasuis
Haemophilus parasuis
3
(0 x 3)
3 by_platform
by_series
11 Transcriptional landscape of Rag2 -/- thymocytes [ChIP-Seq] (GSE56393) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) University of Birmingham 2014-04-01 Mus musculus
Mus musculus
1
(0 x 1)
1 by_platform
by_series
12 Transcriptional landscape of Rag2 -/- thymocytes [ChIP-Seq] (GSE56393) [HT Sequencing] AB SOLiD 4 System (Mus musculus) (GPL14602) University of Birmingham 2014-04-01 Mus musculus
Mus musculus
1
(0 x 1)
1 by_platform
by_series
13 Transcriptional landscape of Rag2 -/- thymocytes (GSE56395) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) University of Birmingham 2014-04-01 Mus musculus
Mus musculus
1
(0 x 1)
1 by_platform
by_series
14 Transcriptional landscape of Rag2 -/- thymocytes [Mnase-Seq] (GSE56360) [HT Sequencing] AB SOLiD 4 System (Mus musculus) (GPL14602) University of Birmingham 2014-03-31 Mus musculus
Mus musculus
2
(0 x 2)
2 by_platform
by_series
15 Transcriptional landscape of Rag2 -/- thymocytes [ShortRNA-Seq] (GSE56358) [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) University of Birmingham 2014-03-31 Mus musculus
Mus musculus
1
(0 x 1)
1 by_platform
by_series
16 Comparison of Transcriptome Profiles of Human Ehrlichiosis Agents (GSE56339) [HT Sequencing] Illumina HiSeq 2000 (Ehrlichia chaffeensis str. Saint Vincent) (GPL18512) University of Maryland School of Medicine 2014-03-28 Ehrlichia chaffeensis,unidentified
Ehrlichia chaffeensis,unidentified
12
(0 x 12)
12 by_platform
by_series
17 Next-generation sequencing facilitates quantitative analysis of AcKLF5 and unAcKLF5 transcriptomes in xenografts of DU-145 cell line (GSE56343) [HT Sequencing] Illumina HiSeq 2500 (Homo sapiens) (GPL16791) Nankai university 2014-03-28 Homo sapiens
Homo sapiens
3
(0 x 3)
3 by_platform
by_series
18 Expression profiling by high throughput sequencing (GSE56292) [HT Sequencing] Illumina HiSeq 1500 (Mus musculus) (GPL18480) RIKEN 2014-03-27 Mus musculus
Mus musculus
15
(0 x 15)
9 6 by_platform
by_series
19 The age and genomic integrity of neurons after cortical stroke in humans (GSE56267) [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) KTH-Science for Life Laboratory 2014-03-27 Homo sapiens
Homo sapiens
13
(0 x 13)
13 by_platform
by_series
20 Genome-wide expression analysis of young, senescent and p38MAPK-inhibitited senescent human fibroblasts. (GSE56293) [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) Saint Louis University School of Medicine 2014-03-27 Homo sapiens
Homo sapiens
6
(0 x 6)
6 by_platform
by_series
1   |   2   |   3   |   4   |   5      »      [385]