Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(756)
  Primates
(5)
  Rodents
(391)
  Mammals
(31)
  Vertebrates
(52)
  Invertebrates
(187)
  Plants
(210)
  Bacteria
(89)
  Viruses
(1)
  Phages
(0)
  Unclassified
(13)
  All
(1,736)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(4)
  GeneChip
(569)
  Tiling Array
(136)
  cDNA Array
(101)
  Oligo Array
(605)
  Bead Array
(145)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(3)
  HT-Seq
(171)
  Other
(2)
  All
(1,736)
 
1   |   2   |   3   |   4   |   5      »      [9]
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Conservation and divergence of methylation patterning in plants and animals (GSE21152) [HT Sequencing] Illumina Genome Analyzer II (Arabidopsis thaliana) (GPL9302) UCLA 2010-03-31 Arabidopsis thaliana
Arabidopsis thaliana
3
(0 x 3)
3 by_platform
by_series
2 Conservation and divergence of methylation patterning in plants and animals (GSE21152) [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) UCLA 2010-03-31 Mus musculus
Mus musculus
3
(0 x 3)
3 by_platform
by_series
3 DNA copy number, including telomeres and mitochondria, assayed using next-generation sequencing (GSE21159) [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) Institute for Translational Oncology and Immunology 2010-03-31 Homo sapiens
Homo sapiens
3
(0 x 3)
2 1 by_platform
by_series
4 Conservation and divergence of methylation patterning in plants and animals (GSE21152) [HT Sequencing] Illumina Genome Analyzer (Danio rerio) (GPL10164) UCLA 2010-03-31 Danio rerio
Danio rerio
2
(0 x 2)
2 by_platform
by_series
5 Conservation and divergence of methylation patterning in plants and animals (GSE21152) [HT Sequencing] Illumina Genome Analyzer (Arabidopsis thaliana) (GPL9062) UCLA 2010-03-31 Arabidopsis thaliana
Arabidopsis thaliana
1
(0 x 1)
1 by_platform
by_series
6 Conservation and divergence of methylation patterning in plants and animals (GSE21152) [HT Sequencing] Illumina Genome Analyzer (Oryza sativa) (GPL9147) UCLA 2010-03-31 Oryza sativa
Oryza sativa
1
(0 x 1)
1 by_platform
by_series
7 Conservation and divergence of methylation patterning in plants and animals (GSE21152) [HT Sequencing] Illumina Genome Analyzer (Populus trichocarpa) (GPL10284) UCLA 2010-03-31 Populus trichocarpa
Populus trichocarpa
1
(0 x 1)
1 by_platform
by_series
8 Conservation and divergence of methylation patterning in plants and animals (GSE21152) [HT Sequencing] Illumina Genome Analyzer II (Chlamydomonas reinhardtii) (GPL9100) UCLA 2010-03-31 Chlamydomonas reinhardtii
Chlamydomonas reinhardtii
1
(0 x 1)
1 by_platform
by_series
9 Conservation and divergence of methylation patterning in plants and animals (GSE21152) [HT Sequencing] Illumina Genome Analyzer (Ciona intestinalis) (GPL9311) UCLA 2010-03-31 Ciona intestinalis
Ciona intestinalis
1
(0 x 1)
1 by_platform
by_series
10 Conservation and divergence of methylation patterning in plants and animals (GSE21152) [HT Sequencing] Illumina Genome Analyzer II (Apis mellifera) (GPL9909) UCLA 2010-03-31 Apis mellifera
Apis mellifera
1
(0 x 1)
1 by_platform
by_series
11 Derivation of pre-X inactivation human embryonic stem cells under physiological oxygen concentrations (GSE21141) [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) Whitehead Instute - MIT 2010-03-30 Homo sapiens
Homo sapiens
12
(0 x 12)
12 by_platform
by_series
12 The mental retardation gene PHF8 mediates histone H4K20/H3K9 demethylation and regulates zebrafish brain apoptosis and craniofacial development: ChIP-Seq analysis (GSE21108) [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) NIH 2010-03-29 Homo sapiens
Homo sapiens
7
(0 x 7)
7 by_platform
by_series
13 Transcriptome changes in soybean seeds resulting from RNAi suppression of seed storage proteins (GSE21116) [HT Sequencing] Illumina Genome Analyzer (Glycine max) (GPL10267) USDA/ARS 2010-03-29 Glycine max
Glycine max
2
(0 x 2)
2 by_platform
by_series
14 Functional non-canonical microRNAs in the mammalian hippocampus and cortex (GSE21090) [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) University of California, San Francisco 2010-03-26 Mus musculus
Mus musculus
7
(0 x 7)
7 by_platform
by_series
15 small RNA sequencing of two developmental stages of Ciona intestinalis (GSE21078) [HT Sequencing] Illumina Genome Analyzer II (Ciona intestinalis) (GPL9911) MIT CSAIL 2010-03-26 Ciona intestinalis
Ciona intestinalis
2
(0 x 2)
1 1 by_platform
by_series
16 Estrogen-mediated Epigenetic Repression of Large Chromosomal Regions through DNA Looping (GSE21068) [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) OSU 2010-03-25 Homo sapiens
Homo sapiens
6
(0 x 6)
2 4 by_platform
by_series
17 Transcriptome sequencing and comparative transcriptome analysis of the scleroglucan producer Sclerotium rolfsii (GSE21040) [HT Sequencing] 44K multiplex chip, Agilent (Tailor-made microarray, condensed version) (GPL10247) Technische Universität München 2010-03-24 Athelia rolfsii
Athelia rolfsii
109,690
(21,938 x 5)
5 by_platform
by_series
18 Genome-wide assessment of differential roles for p300 and CBP in transcription regulation (GSE21026) [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) Leiden University Medical Center 2010-03-23 Homo sapiens
Homo sapiens
6
(0 x 6)
6 by_platform
by_series
19 Traf6 function in the innate immune response of zebrafish embryos (GSE21024) [HT Sequencing] Illumina Genome Analyzer II (Danio rerio) (GPL9319) AMC 2010-03-23 Danio rerio
Danio rerio
4
(0 x 4)
4 by_platform
by_series
20 Systematic analysis of miRNA transcriptome of skeletal muscle identifies novel miRNAs and differentially expressed miRNAs in divergent skeletal muscle growth rates of broiler and layer chickens (GSE20992) [HT Sequencing] Illumina Genome Analyzer (Gallus gallus) (GPL10223) Peking University 2010-03-22 Gallus gallus
Gallus gallus
2
(0 x 2)
2 by_platform
by_series
1   |   2   |   3   |   4   |   5      »      [9]