Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(836)
  Primates
(10)
  Rodents
(586)
  Mammals
(39)
  Vertebrates
(49)
  Invertebrates
(184)
  Plants
(231)
  Bacteria
(113)
  Viruses
(2)
  Phages
(0)
  Unclassified
(8)
  All
(2,065)
 
  SAGE NlaIII
(2)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(784)
  Tiling Array
(153)
  cDNA Array
(103)
  Oligo Array
(509)
  Bead Array
(200)
  Protein Array
(0)
  Antibody
(1)
  RT-PCR
(16)
  HT-Seq
(286)
  Other
(11)
  All
(2,065)
 
1   |   2   |   3   |   4   |   5      »      [15]
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Tripartite organization of centromeric chromatin in budding yeast (GSE28298) [HT Sequencing] Illumina HiSeq 2000 (Saccharomyces cerevisiae) (GPL13821) Fred Hutchinson Cancer Research Center 2011-03-31 Saccharomyces cerevisiae
Saccharomyces cerevisiae
28
(0 x 28)
28 by_platform
by_series
2 Genome-wide analysis reveals unique regulation of transcription of Th2-specific genes by GATA3 (GSE28292) [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) Chiba University 2011-03-31 Mus musculus
Mus musculus
14
(0 x 14)
7 7 by_platform
by_series
3 Genome-wide analysis of transcription factor E2F1 mutant proteins reveals that N- and C-terminal protein interaction domains do not participate in targeting E2F1 to the human genome. (GSE28286) [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) Stanford University 2011-03-31 Homo sapiens
Homo sapiens
9
(0 x 9)
9 by_platform
by_series
4 REST ChIP-chip and knockdown expression profiling (GSE28289) [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) genome institute of singapore 2011-03-31 Mus musculus
Mus musculus
6
(0 x 6)
6 by_platform
by_series
5 An East-Asian polymorphism underlies BCR-ABL mutation-independent resistance to tyrosine kinase inhibitors in chronic myelogenous leukemia (GSE28303) [HT Sequencing] AB SOLiD System 2.0 (Homo sapiens) (GPL9138) Genome Institute of Singapore 2011-03-31 Homo sapiens
Homo sapiens
5
(0 x 5)
5 by_platform
by_series
6 An East-Asian polymorphism underlies BCR-ABL mutation-independent resistance to tyrosine kinase inhibitors in chronic myelogenous leukemia (GSE28303) [HT Sequencing] AB SOLiD System 3.0 (Homo sapiens) (GPL9442) Genome Institute of Singapore 2011-03-31 Homo sapiens
Homo sapiens
1
(0 x 1)
1 by_platform
by_series
7 Patterns and mechanisms of ancestral histone protein inheritance in budding yeast (GSE28269) [HT Sequencing] Illumina Genome Analyzer (Saccharomyces cerevisiae) (GPL9134) The Hebrew University of Jerusalem 2011-03-30 Saccharomyces cerevisiae
Saccharomyces cerevisiae
16
(0 x 16)
2 14 by_platform
by_series
8 NKX3-1, a Novel Transcriptional Factor of AR, Promotes Prostate Cancer Cell Survival via RAB3B GTPase-mediated protein trafficking (GSE28264) [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) Genome Institute of Singapore (GIS) 2011-03-30 Homo sapiens
Homo sapiens
9
(0 x 9)
9 by_platform
by_series
9 Chloroplast-genome-wide maps of small RNAs in Chinese cabbage (Brassica rapa) and Arabidopsis thaliana (Ler). (GSE28281) [HT Sequencing] Illumina Genome Analyzer II (Brassica rapa subsp. chinensis) (GPL13353) Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences 2011-03-30 Brassica rapa subsp. chinensis
Brassica rapa subsp. chinensis
5
(0 x 5)
1 4 by_platform
by_series
10 Sequential ChIP-bisulfite sequencing enables direct genome-scale investigation of chromatin and DNA methylation cross-talk (GSE28254) [HT Sequencing] Illumina Genome Analyzer IIx (Homo sapiens) (GPL10999) Radboud University, Nijmegen Center for Molecular Life Sciences 2011-03-29 Homo sapiens
Homo sapiens
9
(0 x 9)
9 by_platform
by_series
11 CTCF-Mediated Functional Chromatin Interactome in Pluripotent Cells (GSE28247) [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) Genome Institute of Singapore 2011-03-29 Mus musculus
Mus musculus
8
(0 x 8)
8 by_platform
by_series
12 Genome-wide maps of REST and its cofactors in mouse E14 cells (GSE28233) [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) genome institute of singapore 2011-03-29 Mus musculus
Mus musculus
6
(0 x 6)
6 by_platform
by_series
13 Sequential ChIP-bisulfite sequencing enables direct genome-scale investigation of chromatin and DNA methylation cross-talk (GSE28254) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) Radboud University, Nijmegen Center for Molecular Life Sciences 2011-03-29 Mus musculus
Mus musculus
4
(0 x 4)
4 by_platform
by_series
14 Genome-wide profiling of miRNAs and other small non-coding RNAs in the Verticillium dahliae inoculated cotton roots (GSE28236) [HT Sequencing] Illumina Genome Analyzer (Gossypium hirsutum) (GPL9362) Shandong Agricultural University 2011-03-29 Gossypium hirsutum
Gossypium hirsutum
2
(0 x 2)
2 by_platform
by_series
15 Genome-wide profiling of miRNAs and other small non-coding RNAs in the Verticillium dahliae inoculated cotton roots (GSE28236) [HT Sequencing] Illumina Genome Analyzer (Gossypium barbadense) (GPL11270) Shandong Agricultural University 2011-03-29 Gossypium barbadense
Gossypium barbadense
2
(0 x 2)
2 by_platform
by_series
16 Alternative splicing of the TRPV1 gene underlies infrared sensation in vampire bats (GSE28243) [HT Sequencing] Illumina Genome Analyzer II (Desmodus rotundus) (GPL13343) Carnegie Institution 2011-03-29 Desmodus rotundus
Desmodus rotundus
2
(0 x 2)
1 1 by_platform
by_series
17 Alternative splicing of the TRPV1 gene underlies infrared sensation in vampire bats (GSE28243) [HT Sequencing] Illumina Genome Analyzer II (Carollia brevicauda) (GPL13344) Carnegie Institution 2011-03-29 Carollia brevicauda
Carollia brevicauda
2
(0 x 2)
1 1 by_platform
by_series
18 Sequential ChIP-bisulfite sequencing enables direct genome-scale investigation of chromatin and DNA methylation cross-talk (GSE28254) [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) Radboud University, Nijmegen Center for Molecular Life Sciences 2011-03-29 Mus musculus
Mus musculus
2
(0 x 2)
2 by_platform
by_series
19 The androgen receptor induces a distinct transcriptional program in castration resistant prostate cancer in man (GSE28219) [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) Cambridge Research Institute, Cancer Research UK 2011-03-28 Homo sapiens
Homo sapiens
25
(0 x 25)
24 1 by_platform
by_series
20 Two-step RNA sequencing identifies a tissue-specific landscape of sense/antisense transcription (GSE28207) [HT Sequencing] AB SOLiD System 2.0 (Mus musculus) (GPL10279) University Clinic of Schleswig Holstein 2011-03-28 Mus musculus
Mus musculus
4
(0 x 4)
4 by_platform
by_series
1   |   2   |   3   |   4   |   5      »      [15]