Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(224)		   SAGE RsaI
(1)		   SAGE Sau3A
(16)		   MPSS
(56)		   GeneChip
(16,580)		   Tiling Array
(3,529)		   cDNA Array
(5,792)		   Oligo Array
(11,628)		   Bead Array
(2,848)		   Protein Array
(1)		   Antibody
(37)		   RT-PCR
(223)		   HT-Seq
(4,411)		   Other
(158)		   All
(45,516)		  
1   |   2   |   3   |   4   |   5      »      [221]
Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Comparative sequence analysis of plant small RNAs (GSE28755) [HT Sequencing] Illumina Genome Analyzer II (Zostera marina) (GPL14640) University of Delaware 2011-04-20 Zostera marina
Zostera marina		 3
(0 x 3) 		1 1 1 by_platform
by_series
2 High-throughput sequencing of small RNAs in Zostera marina (GSE32480) [HT Sequencing] Illumina Genome Analyzer II (Zostera marina) (GPL14640) University of Delaware 2011-09-29 Zostera marina
Zostera marina		 3
(0 x 3) 		1 1 1 by_platform
by_series
3 Unraveling the KNOTTED1 regulatory network in maize meristems (GSE38487) [HT Sequencing] Illumina HiSeq 2000 (Zea mays) (GPL15463) The Ohio State University 2012-06-05 Zea mays
Zea mays		 20
(0 x 20) 		6 4 10 by_platform
by_series
4 Epigenetic modifications and their relationships to smRNA and mRNA transcriptomes in maize (GSE15286) [HT Sequencing] Illumina Genome Analyzer (Zea mays) (GPL9141) Yale University 2009-03-18 Zea mays
Zea mays		 14
(0 x 14) 		7 7 by_platform
by_series
5 Small RNA sequencing in maize hybrids and inbreds (GSE37411) [HT Sequencing] Illumina Genome Analyzer (Zea mays) (GPL9141) University of Illinois at Urbana-Champaign 2012-04-18 Zea mays
Zea mays		 10
(0 x 10) 		6 4 by_platform
by_series
6 Effects of drought on gene expression in Maize reproductive and leaf meristem tissue revealed by RNA-seq (GSE40070) [HT Sequencing] Illumina Genome Analyzer IIx (Zea mays) (GPL13977) Virginia Tech 2012-08-13 Zea mays
Zea mays		 8
(0 x 8) 		4 4 by_platform
by_series
7 Digital gene expression profiling for maize development - 2mm ear libraries, B73 vs. ramosa3 mutant (GSE24788) [HT Sequencing] Illumina Genome Analyzer (Zea mays) (GPL9141) Cold Spring Harbor Laboratory 2010-10-19 Zea mays
Zea mays		 7
(0 x 7) 		7 by_platform
by_series
8 Unraveling the KNOTTED1 regulatory network in maize meristems (ChIP-seq) (GSE39161) [HT Sequencing] Illumina Genome Analyzer II (Zea mays) (GPL9361) The Ohio State University 2012-07-06 Zea mays
Zea mays		 6
(0 x 6) 		6 by_platform
by_series
9 Digital gene expression analysis of early root infection of Sporisorium reilianum f.sp.zeae in maize based on susceptible and resistant lines (GSE40952) [HT Sequencing] Illumina Genome Analyzer (Zea mays) (GPL9141) Huangzhong agricultural university 2012-09-18 Zea mays
Zea mays		 6
(0 x 6) 		6 by_platform
by_series
10 A Genome-Wide Characterization of MicroRNA Genes in Maize (GSE17943) [HT Sequencing] Illumina Genome Analyzer (Zea mays) (GPL9141) Cold Spring Harbor Laboratory 2009-09-02 Zea mays
Zea mays		 5
(0 x 5) 		1 1 3 by_platform
by_series
11 The maize pericarp transcriptome (GSE38413) [HT Sequencing] Illumina Genome Analyzer II (Zea mays) (GPL9361) The Ohio State University 2012-06-01 Zea mays
Zea mays		 4
(0 x 4) 		4 by_platform
by_series
12 The P1 Transcription Factor Binding to the Genome (GSE38587) [HT Sequencing] Illumina Genome Analyzer IIx (Zea mays) (GPL13977) The Ohio State University 2012-06-07 Zea mays
Zea mays		 4
(0 x 4) 		4 by_platform
by_series
13 High-throughput sequencing of small RNAs in Zea mays (maize) (GSE17339) [HT Sequencing] Illumina Genome Analyzer II (Zea mays) (GPL9361) University of Delaware 2009-07-27 Zea mays
Zea mays		 3
(0 x 3) 		1 1 1 by_platform
by_series
14 Comparative sequence analysis of plant small RNAs (GSE28755) [HT Sequencing] Illumina Genome Analyzer II (Zea mays) (GPL9361) University of Delaware 2011-04-20 Zea mays
Zea mays		 3
(0 x 3) 		1 1 1 by_platform
by_series
15 Small RNA from W23 maize anthers at 1mm, 1.5mm, and 2mm (GSE30986) [HT Sequencing] Illumina Genome Analyzer IIx (Zea mays) (GPL13977) Stanford University 2011-07-27 Zea mays
Zea mays		 3
(0 x 3) 		3 by_platform
by_series
16 Regulation of Gene Expression and Parent-of-Origin Effects in Maize Hybrids (GSE16136) [HT Sequencing] Illumina Genome Analyzer II (Zea mays) (GPL9361) Iowa State University 2009-05-15 Zea mays
Zea mays		 2
(0 x 2) 		2 by_platform
by_series
17 Expression of genes and transposons in mop1 mutants and non-mutants (GSE16789) [HT Sequencing] Illumina Genome Analyzer (Zea mays) (GPL9141) Iowa State University 2009-06-24 Zea mays
Zea mays		 2
(0 x 2) 		2 by_platform
by_series
18 Gene Expression between two cell layers in maize shoot apical meristem (GSE16868) [HT Sequencing] Illumina Genome Analyzer (Zea mays) (GPL9141) Iowa State University 2009-06-27 Zea mays
Zea mays		 2
(0 x 2) 		2 by_platform
by_series
19 The maize leaf transcriptome (GSE16916) [HT Sequencing] Illumina Genome Analyzer II (Zea mays) (GPL9361) Cornell University 2009-07-01 Zea mays
Zea mays		 2
(0 x 2) 		2 by_platform
by_series
20 Profiling of AGO104-dependent gene expression in maize ovaries (GSE26859) [HT Sequencing] Illumina Genome Analyzer (Zea mays) (GPL9141) IRD 2011-01-25 Zea mays
Zea mays		 2
(0 x 2) 		2 by_platform
by_series
1   |   2   |   3   |   4   |   5      »      [221]
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