Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(228)
  SAGE RsaI
(1)
  SAGE Sau3A
(16)
  MPSS
(67)
  GeneChip
(19,582)
  Tiling Array
(4,015)
  cDNA Array
(5,993)
  Oligo Array
(14,254)
  Bead Array
(4,043)
  Protein Array
(1)
  Antibody
(43)
  RT-PCR
(338)
  HT-Seq
(7,682)
  Other
(247)
  All
(56,529)
 
1   |   2   |   3   |   4   |   5      »      [385]
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 RACK1 function in the miRNA pathway (GSE40579) [HT Sequencing] Illumina HiSeq 2000 (Arabidopsis thaliana) (GPL13222) ZMBP - University of Tuebingen 2012-09-04 Arabidopsis thaliana
Arabidopsis thaliana
4
(0 x 4)
4 by_platform
by_series
2 MiR-27a-3p in peripheral blood mononuclear cells as a potential marker for pancreatic cancer screening (GSE37710) [HT Sequencing] Illumina HiSeq 2000 (Homo sapiens) (GPL11154) Zhongshan Hospital, Fudan University 2012-05-02 Homo sapiens
Homo sapiens
3
(0 x 3)
3 by_platform
by_series
3 RNA sequencing of Kineococcus radiotolerans transcriptome in response to ionizing radiation (GSE51096) [HT Sequencing] Illumina HiSeq 2000 (Kineococcus radiotolerans) (GPL17751) Zhengjiang Sci-Tech University 2013-09-23 Kineococcus radiotolerans
Kineococcus radiotolerans
2
(0 x 2)
2 by_platform
by_series
4 RNA-seq analysis generated a comprehensive landscape of transcriptomes and revealed complex patterns of transcripts in Chinese HBV-related hepatocellular carcinoma (GSE25599) [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) ZheJiang University 2010-11-24 Homo sapiens
Homo sapiens
20
(0 x 20)
20 by_platform
by_series
5 Transcriptome analysis of rice pathogen Acidovorax avenae subsp. avenae cultivated in vitro, in vivo and in co-culture with the rice rhizobacterium Burkholderia seminalis (GSE50522) [HT Sequencing] Illumina HiSeq 2000 (Acidovorax avenae subsp. avenae RS-1) (GPL17669) Zhejiang University 2013-09-02 Acidovorax avenae,unidentified
Acidovorax avenae,unidentified
6
(0 x 6)
6 by_platform
by_series
6 Characterization of small interfering RNAs derived from the geminivirus/betasatellite complex using deep sequencing (GSE26368) [HT Sequencing] Illumina Genome Analyzer (Tomato yellow leaf curl China virus) (GPL11369) Zhejiang University 2010-12-30 Tomato yellow leaf curl China virus
Tomato yellow leaf curl China virus
5
(0 x 5)
5 by_platform
by_series
7 Magnesium Availability Regulates Development of Root Hairs in Arabidopsis thaliana (GSE42899) [HT Sequencing] Illumina HiSeq 2000 (Arabidopsis thaliana) (GPL13222) Zhejiang University 2012-12-13 Arabidopsis thaliana
Arabidopsis thaliana
5
(0 x 5)
5 by_platform
by_series
8 miRNA profiling in cytoplasmic male sterile (CMS) and its maintainer fertile (MF) lines of Brassica juncea by deep sequencing (GSE43244) [HT Sequencing] Illumina Genome Analyzer IIx (Brassica juncea) (GPL16439) Zhejiang University 2013-01-02 Brassica juncea
Brassica juncea
4
(0 x 4)
4 by_platform
by_series
9 Global Analysis of the Transcriptional Response of Whitefly to Entomopathogenic Fungi Beauveria bassiana Reveals New Insights on Host-Pathogen Interactions (GSE38108) [HT Sequencing] Illumina Genome Analyzer II (Bemisia tabaci) (GPL10981) Zhejiang University 2012-05-22 Bemisia tabaci
Bemisia tabaci
3
(0 x 3)
3 by_platform
by_series
10 Genomic dissection of small RNAs in wild rice (O.rufipogon): lessons for rice domestication [small RNA] (GSE39308) [HT Sequencing] Illumina HiSeq 2000 (Oryza rufipogon) (GPL15800) Zhejiang University 2012-07-12 Oryza rufipogon
Oryza rufipogon
3
(0 x 3)
1 2 by_platform
by_series
11 Genomic dissection of small RNAs in wild rice (O.rufipogon): lessons for rice domestication (GSE39309) [HT Sequencing] Illumina HiSeq 2000 (Oryza rufipogon) (GPL15800) Zhejiang University 2012-07-12 Oryza rufipogon
Oryza rufipogon
3
(0 x 3)
1 2 by_platform
by_series
12 Global analysis of the transcriptional difference between indigenous and invasive whiteflies reveals the possible mechanism of whitefly invasion (GSE41864) [HT Sequencing] Illumina HiSeq 2000 (Bemisia tabaci) (GPL16220) Zhejiang University 2012-10-26 Bemisia tabaci
Bemisia tabaci
3
(0 x 3)
3 by_platform
by_series
13 Transcriptome profiling analysis of bacterial challenged Lateolabrax japonicus reveals deep insight into the immune-relevant genes in marine fish (DGE) (GSE21712) [HT Sequencing] Illumina Genome Analyzer II (Lateolabrax japonicus) (GPL10398) ZheJiang University 2010-05-06 Lateolabrax japonicus
Lateolabrax japonicus
2
(0 x 2)
2 by_platform
by_series
14 Chip-Seq analysis of Sox2 protein genome-wide DNA binding sites in glioma cancer cells (GSE23795) [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) ZheJiang University 2010-08-25 Homo sapiens
Homo sapiens
2
(0 x 2)
2 by_platform
by_series
15 An integrative analysis of the SOX2 response program in glioblastoma (GSE23839) [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) ZheJiang University 2010-08-26 Homo sapiens
Homo sapiens
2
(0 x 2)
2 by_platform
by_series
16 Global Analysis of the Transcriptional Response of Whitefly to Tomato Yellow Leaf Curl China Virus (TYLCCNV) (GSE24374) [HT Sequencing] Illumina Genome Analyzer II (Bemisia tabaci) (GPL10981) Zhejiang University 2010-09-27 Bemisia tabaci
Bemisia tabaci
2
(0 x 2)
2 by_platform
by_series
17 Detoxification activity and energy cost is attenuated in the whiteflies feeding on Tomato yellow leaf curl China virus-infected tobacco plants (GSE30409) [HT Sequencing] Illumina Genome Analyzer II (Bemisia tabaci) (GPL10981) Zhejiang University 2011-07-05 Bemisia tabaci
Bemisia tabaci
2
(0 x 2)
2 by_platform
by_series
18 Genome-wide maps of methylation state in cisplatin sensitive and resistant ovarian cancer cell line (GSE31418) [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) ZheJiang University 2011-08-16 Homo sapiens
Homo sapiens
2
(0 x 2)
2 by_platform
by_series
19 Bbssk1 dependent gene expression in Beauveria bassiana (GSE40229) [HT Sequencing] Illumina HiSeq 2000 (Beauveria bassiana ARSEF 2860) (GPL15963) Zhejiang University 2012-08-20 Beauveria bassiana ARSEF 2860
Beauveria bassiana ARSEF 2860
2
(0 x 2)
2 by_platform
by_series
20 Transcriptome profiling analysis of bacterial challenged Lateolabrax japonicus reveals deep insight into the immune-relevant genes in marine fish (RNA-seq) (GSE21721) [HT Sequencing] Illumina Genome Analyzer II (Lateolabrax japonicus) (GPL10398) ZheJiang University 2010-05-06 Lateolabrax japonicus
Lateolabrax japonicus
1
(0 x 1)
1 by_platform
by_series
1   |   2   |   3   |   4   |   5      »      [385]