Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(27,231)
  Primates
(191)
  Rodents
(7,993)
  Mammals
(1,491)
  Vertebrates
(704)
  Invertebrates
(853)
  Plants
(4,347)
  Bacteria
(2,475)
  Viruses
(10)
  Phages
(0)
  Unclassified
(91)
  All
(45,412)
 
  SAGE NlaIII
(19)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(52)
  GeneChip
(20,292)
  Tiling Array
(656)
  cDNA Array
(7,184)
  Oligo Array
(11,589)
  Bead Array
(4,460)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(272)
  HT-Seq
(875)
  Other
(13)
  All
(45,412)
 
  brain
(92)
  blood
(129)
  connective
(63)
  reproductive
(69)
  muscular
(19)
  digestive
(12)
  liver
(10)
  lung
(5)
  urinary
(23)
  endo/exo-crine
(2)
  embryo
(27)
  adult aerial structure
(51)
  young aerial structure
(10)
  root
(0)
  meristem/growing tissue
(9)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(33)
  unclassified
(321)
  all
(875)
 
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM541604 small_intestine_polyadenylated_RNA-Seq 0 University Clinic of Schleswig Holstein 2010-05-05 [HT Sequencing] AB SOLiD System 2.0 (Mus musculus) (GPL10279) SRA Mus musculus
Mus musculus
intestine small_intestine_total_tissue
2 GSM541605 colon_polyadenylated_RNA-Seq 0 University Clinic of Schleswig Holstein 2010-05-05 [HT Sequencing] AB SOLiD System 2.0 (Mus musculus) (GPL10279) SRA Mus musculus
Mus musculus
colon colon_total_tissue
3 GSM541606 small-intestine_ribosomal_RNA_depleted_RNA-Seq 0 University Clinic of Schleswig Holstein 2010-05-05 [HT Sequencing] AB SOLiD System 2.0 (Mus musculus) (GPL10279) SRA Mus musculus
Mus musculus
intestine small_intestine_total_tissue
4 GSM541607 colon_ribosomal_RNA_depleted_RNA-Seq 0 University Clinic of Schleswig Holstein 2010-05-05 [HT Sequencing] AB SOLiD System 2.0 (Mus musculus) (GPL10279) SRA Mus musculus
Mus musculus
colon colon_total_tissue
5 GSM698465 small intestine cDNA replicate B1 Biotin 0 University Clinic of Schleswig Holstein 2011-03-28 [HT Sequencing] AB SOLiD System 2.0 (Mus musculus) (GPL10279) SRA Mus musculus
Mus musculus
intestine small intestine total tissue
6 GSM698466 small intestine cDNA replicate B2 Biotin 0 University Clinic of Schleswig Holstein 2011-03-28 [HT Sequencing] AB SOLiD System 2.0 (Mus musculus) (GPL10279) SRA Mus musculus
Mus musculus
intestine small intestine total tissue
7 GSM698467 small intestine cDNA replicate C Biotin 0 University Clinic of Schleswig Holstein 2011-03-28 [HT Sequencing] AB SOLiD System 2.0 (Mus musculus) (GPL10279) SRA Mus musculus
Mus musculus
intestine small intestine total tissue
8 GSM698468 small intestine cDNA replicate D Biotin 0 University Clinic of Schleswig Holstein 2011-03-28 [HT Sequencing] AB SOLiD System 2.0 (Mus musculus) (GPL10279) SRA Mus musculus
Mus musculus
intestine small intestine total tissue
9 GSM698469 small intestine A (Poly-A Enrichment) 0 University Clinic of Schleswig Holstein 2011-03-28 [HT Sequencing] AB SOLiD System 3.0 (Mus musculus) (GPL9318) SRA Mus musculus
Mus musculus
intestine small intestine total tissue
10 GSM698470 colon A (Poly-A Enrichment) 0 University Clinic of Schleswig Holstein 2011-03-28 [HT Sequencing] AB SOLiD System 3.0 (Mus musculus) (GPL9318) SRA Mus musculus
Mus musculus
colon colon total tissue
11 GSM698471 small intestine B (Poly-A Enrichment) 0 University Clinic of Schleswig Holstein 2011-03-28 [HT Sequencing] AB SOLiD System 3.0 (Mus musculus) (GPL9318) SRA Mus musculus
Mus musculus
intestine small intestine total tissue
12 GSM698472 colon B (Poly-A Enrichment) 0 University Clinic of Schleswig Holstein 2011-03-28 [HT Sequencing] AB SOLiD System 3.0 (Mus musculus) (GPL9318) SRA Mus musculus
Mus musculus
colon colon total tissue