Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(6,442)		   Primates
(0)		   Rodents
(1,098)		   Mammals
(60)		   Vertebrates
(353)		   Invertebrates
(733)		   Plants
(622)		   Bacteria
(276)		   Viruses
(40)		   Phages
(0)		   Unclassified
(9)		   All
(9,633)		  
  SAGE NlaIII
(4)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(4,112)		   Tiling Array
(87)		   cDNA Array
(624)		   Oligo Array
(1,905)		   Bead Array
(2,521)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(375)		   Other
(5)		   All
(9,633)		  
  brain
(1)		   blood
(71)		   connective
(8)		   reproductive
(49)		   muscular
(0)		   digestive
(12)		   liver
(8)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(74)		   embryo
(85)		   adult aerial structure
(10)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(23)		   unclassified
(34)		   all
(375)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1000554 M-D-_1 0 National University of Singapore 2012-09-10 [HT Sequencing] AB SOLiD 3 Plus System (Danio rerio) (GPL16034) SRA Danio rerio
Danio rerio		 liver/hepato control liver, M-D-
2 GSM1000555 M-D-_2 0 National University of Singapore 2012-09-10 [HT Sequencing] AB SOLiD 3 Plus System (Danio rerio) (GPL16034) SRA Danio rerio
Danio rerio		 liver/hepato control liver, M-D-
3 GSM1000556 M+D-_1 0 National University of Singapore 2012-09-10 [HT Sequencing] AB SOLiD 3 Plus System (Danio rerio) (GPL16034) SRA Danio rerio
Danio rerio		 liver/hepato control liver, M+D-
4 GSM1000557 M+D-_2 0 National University of Singapore 2012-09-10 [HT Sequencing] AB SOLiD 3 Plus System (Danio rerio) (GPL16034) SRA Danio rerio
Danio rerio		 liver/hepato control liver, M+D-
5 GSM1000558 M-D+_1 0 National University of Singapore 2012-09-10 [HT Sequencing] AB SOLiD 3 Plus System (Danio rerio) (GPL16034) SRA Danio rerio
Danio rerio		 liver/hepato control liver, M-D+
6 GSM1000559 M-D+_2 0 National University of Singapore 2012-09-10 [HT Sequencing] AB SOLiD 3 Plus System (Danio rerio) (GPL16034) SRA Danio rerio
Danio rerio		 liver/hepato control liver, M-D+
7 GSM1000560 M+D+_1 0 National University of Singapore 2012-09-10 [HT Sequencing] AB SOLiD 3 Plus System (Danio rerio) (GPL16034) SRA Danio rerio
Danio rerio		 liver/hepato liver tumor, M+D+
8 GSM1000561 M+D+_2 0 National University of Singapore 2012-09-10 [HT Sequencing] AB SOLiD 3 Plus System (Danio rerio) (GPL16034) SRA Danio rerio
Danio rerio		 liver/hepato liver tumor, M+D+
9 GSM1001320 Replicate2-ES-WGA-input 0 Genome Institute of Singapore 2012-09-11 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 embryo Embryonic stem cell
10 GSM1001321 Replicate2-ES-WGA-H3K4me3 0 Genome Institute of Singapore 2012-09-11 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 embryo Embryonic stem cell
11 GSM1001322 1kCells-ES-input-WGA 0 Genome Institute of Singapore 2012-09-11 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 embryo Embryonic stem cell
12 GSM1001323 1kCells-ES-H3K27me3-WGA 0 Genome Institute of Singapore 2012-09-11 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 embryo Embryonic stem cell
13 GSM1001324 10kCells-ES-input-WGA 0 Genome Institute of Singapore 2012-09-11 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 embryo Embryonic stem cell
14 GSM1001325 10kCells-ES-H3K27me3-WGA 0 Genome Institute of Singapore 2012-09-11 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 embryo Embryonic stem cell
15 GSM1001326 100kCells-ES-input-WGA 0 Genome Institute of Singapore 2012-09-11 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 embryo Embryonic stem cell
16 GSM1001327 100kCells-ES-H3K27me3-WGA 0 Genome Institute of Singapore 2012-09-11 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 embryo Embryonic stem cell
17 GSM1001328 Non-WGA-ES-input 0 Genome Institute of Singapore 2012-09-11 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 embryo Embryonic stem cell
18 GSM1001329 Non-WGA-ES-H3K27me3 0 Genome Institute of Singapore 2012-09-11 [HT Sequencing] Illumina Genome Analyzer (Mus musculus) (GPL9185) SRA Mus musculus
Mus musculus		 embryo Embryonic stem cell
19 GSM1008530 DMSOtreated_p65_ChIPSeq 0 A*STAR 2012-09-24 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens		 skin HeLa cells
20 GSM1008531 TNFtreated_p65_ChIPSeq 0 A*STAR 2012-09-24 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens		 skin HeLa cells
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