Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(24,084)		   Primates
(96)		   Rodents
(5,968)		   Mammals
(882)		   Vertebrates
(512)		   Invertebrates
(2,100)		   Plants
(2,826)		   Bacteria
(1,279)		   Viruses
(0)		   Phages
(0)		   Unclassified
(135)		   All
(37,974)		  
  SAGE NlaIII
(2)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(4)		   GeneChip
(14,155)		   Tiling Array
(1,015)		   cDNA Array
(2,097)		   Oligo Array
(16,306)		   Bead Array
(3,098)		   Protein Array
(0)		   Antibody
(28)		   RT-PCR
(210)		   HT-Seq
(1,030)		   Other
(29)		   All
(37,974)		  
  brain
(81)		   blood
(141)		   connective
(54)		   reproductive
(36)		   muscular
(1)		   digestive
(11)		   liver
(29)		   lung
(8)		   urinary
(2)		   endo/exo-crine
(139)		   embryo
(123)		   adult aerial structure
(12)		   young aerial structure
(9)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(9)		   seed/fruit/grain
(0)		   pooled
(25)		   unclassified
(350)		   all
(1,030)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM595900 Cunninghamia lanceolata: small RNAs from five tissues 2,815,874 Institute of botany 2010-09-20 [HT Sequencing] Illumina Genome Analyzer (Cunninghamia lanceolata) (GPL10946) SRA Cunninghamia lanceolata
Cunninghamia lanceolata		 pooled seeds, calluses, two-week-old young shoots, leaves and stems
2 GSM602249 Testis tissue small RNA 2,024,525 Sichuan Agricultural University 2010-09-29 [HT Sequencing] Illumina Genome Analyzer (Sus scrofa) (GPL9126) SRA Sus scrofa
Sus scrofa domestica		 testis Testis
3 GSM571078 H2O2-treated rice seedlings 1,797,320 school of life sciences 2010-07-28 [HT Sequencing] Illumina Genome Analyzer (Oryza sativa) (GPL9147) SRA Oryza sativa
Oryza sativa		 young aerial structure rice seedlings
4 GSM571077 Control rice seedlings 1,749,001 school of life sciences 2010-07-28 [HT Sequencing] Illumina Genome Analyzer (Oryza sativa) (GPL9147) SRA Oryza sativa
Oryza sativa		 young aerial structure rice seedlings
5 GSM602248 Ovary tissue small RNA 1,374,417 Sichuan Agricultural University 2010-09-29 [HT Sequencing] Illumina Genome Analyzer (Sus scrofa) (GPL9126) SRA Sus scrofa
Sus scrofa domestica		 ovary Ovary
6 GSM571545 Trypanosoma brucei brucei strain 247MelCyR procyclic culture library 1 800,580 University of Glasgow 2010-07-28 [HT Sequencing] Illumina Genome Analyzer II (Trypanosoma brucei brucei) (GPL10735) SRA Trypanosoma brucei brucei
Trypanosoma brucei brucei		 unclassified source_name:Trypanosoma brucei brucei strain 247MelCyR procyclic culture 1 title:Trypanosoma brucei brucei strain 247MelCyR procyclic culture library 1
7 GSM571544 Trypanosoma brucei brucei strain STIB 247 procyclic culture library 2 768,443 University of Glasgow 2010-07-28 [HT Sequencing] Illumina Genome Analyzer II (Trypanosoma brucei brucei) (GPL10735) SRA Trypanosoma brucei brucei
Trypanosoma brucei brucei		 unclassified source_name:Trypanosoma brucei brucei strain STIB 247 procyclic culture 2 title:Trypanosoma brucei brucei strain STIB 247 procyclic culture library 2
8 GSM571543 Trypanosoma brucei brucei strain STIB 247 procyclic culture library 1 668,631 University of Glasgow 2010-07-28 [HT Sequencing] Illumina Genome Analyzer II (Trypanosoma brucei brucei) (GPL10735) SRA Trypanosoma brucei brucei
Trypanosoma brucei brucei		 unclassified source_name:Trypanosoma brucei brucei strain STIB 247 procyclic culture 1 title:Trypanosoma brucei brucei strain STIB 247 procyclic culture library 1
9 GSM565979 5-8F_cytoplasm 572,791 Sun Yat-Sen University 2010-07-13 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:5-8F title:5-8F_cytoplasm
10 GSM565978 5-8F_nucleus 524,794 Sun Yat-Sen University 2010-07-13 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:5-8F title:5-8F_nucleus
11 GSM569185 Human centroblast [09-001] 342,048 NIAMS 2010-07-22 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 lymphnode Human Centroblasts (Germinal Center B cells), Tonsil, FACS
12 GSM571546 Trypanosoma brucei brucei strain 247MelCyR procyclic culture library 2 332,815 University of Glasgow 2010-07-28 [HT Sequencing] Illumina Genome Analyzer II (Trypanosoma brucei brucei) (GPL10735) SRA Trypanosoma brucei brucei
Trypanosoma brucei brucei		 unclassified source_name:Trypanosoma brucei brucei strain 247MelCyR procyclic culture 2 title:Trypanosoma brucei brucei strain 247MelCyR procyclic culture library 2
13 GSM569186 Human centrocyte [09-001] 284,289 NIAMS 2010-07-22 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 lymphnode Human Centrocytes (Germinal Center B cells), Tonsil, FACS
14 GSM569188 Human plasma cell [09-001] 271,357 NIAMS 2010-07-22 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 lymphnode Human Plasma cells, Tonsil, FACS
15 GSM569190 Human memory B cell [09-001] 263,871 NIAMS 2010-07-22 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 lymphnode Human Memory B cells, Tonsil, FACS
16 GSM569187 Human pre-germinal center B cell [09-001] 251,749 NIAMS 2010-07-22 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 lymphnode Human Pre-Germinal Center B cells, Tonsil, FACS
17 GSM571718 small RNAs from Heliconius melpomene melpomene 180,170 University of East Anglia 2010-07-28 [HT Sequencing] Illumina Genome Analyzer (Heliconius melpomene melpomene) (GPL10736) SRA Heliconius melpomene melpomene
Heliconius melpomene melpomene		 unclassified source_name:Heliconius melpomene melpomene. Collected in Darien, Panama (09°10'N/78°43'W) title:small RNAs from Heliconius melpomene melpomene description:Total endogenous small RNAs from from Heliconius melpomene melpomene
18 GSM571719 small RNAs from Heliconius melpomene rosina 151,524 University of East Anglia 2010-07-28 [HT Sequencing] Illumina Genome Analyzer (Heliconius melpomene rosina) (GPL10737) SRA Heliconius melpomene rosina
Heliconius melpomene rosina		 unclassified source_name:Heliconius melpomene rosina. Collected Gamboa, Panama (09°07'N/79°42'W) title:small RNAs from Heliconius melpomene rosina description:Total endogenous small RNAs from from Heliconius melpomene rosina
19 GSM569189 Human naive B cell [09-001] 146,365 NIAMS 2010-07-22 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 lymphnode Human Naive B cells, Tonsil, FACS
20 GSM562115 polyAminus_h9_RNAseq 0 Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences 2010-07-01 [HT Sequencing] Illumina Genome Analyzer II (Homo sapiens) (GPL9115) SRA Homo sapiens
Homo sapiens		 lymphnode hES h9 cells, poly(A)-
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