Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(521,594)		   Primates
(5,069)		   Rodents
(189,292)		   Mammals
(16,929)		   Vertebrates
(18,759)		   Invertebrates
(38,793)		   Plants
(93,301)		   Bacteria
(39,613)		   Viruses
(1,263)		   Phages
(101)		   Unclassified
(5,497)		   All
(931,947)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(391,468)		   Tiling Array
(22,222)		   cDNA Array
(104,397)		   Oligo Array
(247,270)		   Bead Array
(112,023)		   Protein Array
(5)		   Antibody
(1,160)		   RT-PCR
(4,486)		   HT-Seq
(39,106)		   Other
(7,515)		   All
(931,947)		  
  brain
(2,667)		   blood
(5,116)		   connective
(2,209)		   reproductive
(1,931)		   muscular
(888)		   digestive
(1,231)		   liver
(1,138)		   lung
(1,009)		   urinary
(602)		   endo/exo-crine
(1,524)		   embryo
(3,058)		   adult aerial structure
(801)		   young aerial structure
(470)		   root
(230)		   meristem/growing tissue
(165)		   flower/sexual organ
(425)		   seed/fruit/grain
(169)		   pooled
(1,931)		   unclassified
(13,542)		   all
(39,106)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM550779 XEN_11_5a 98 IPMC/CNRS 2010-06-04 [HT Sequencing] AB SOLiD System 2.0 (Xenopus laevis) (GPL10484) SRA Xenopus laevis
Xenopus laevis		 skin epidermal explants at stage 11.5
2 GSM550780 XEN_11_5b 98 IPMC/CNRS 2010-06-04 [HT Sequencing] AB SOLiD System 2.0 (Xenopus laevis) (GPL10484) SRA Xenopus laevis
Xenopus laevis		 skin epidermal explants at stage 11.6
3 GSM550781 XEN_26a 98 IPMC/CNRS 2010-06-04 [HT Sequencing] AB SOLiD System 2.0 (Xenopus laevis) (GPL10484) SRA Xenopus laevis
Xenopus laevis		 skin epidermal explants at stage 26
4 GSM550782 XEN_26b 98 IPMC/CNRS 2010-06-04 [HT Sequencing] AB SOLiD System 2.0 (Xenopus laevis) (GPL10484) SRA Xenopus laevis
Xenopus laevis		 skin epidermal explants at stage 27
5 GSM372601 adult skin 87,960 Cambridge University 2009-02-20 [HT Sequencing] Illumina Genome Analyzer II (Xenopus (Silurana) tropicalis) (GPL9320) SRA Xenopus (Silurana) tropicalis
Xenopus tropicalis		 skin Xenopus tropicalis adult skin
6 GSM446691 prenatal, fetus at day 75 1,467,142 Sichuan Agricultural University 2009-08-31 [HT Sequencing] Illumina Genome Analyzer (Sus scrofa) (GPL9126) SRA Sus scrofa
Sus scrofa domestica		 bone Mixture of all tissues, only discard the bones Three female and three male were pooled.
7 GSM752048 PAD 1,396,180 Sichuan Agricultural University 2011-06-30 [HT Sequencing] Illumina Genome Analyzer II (Sus scrofa) (GPL10945) SRA Sus scrofa
Sus scrofa domestica		 adipos pericardial adipose
8 GSM752040 IAD 1,033,218 Sichuan Agricultural University 2011-06-30 [HT Sequencing] Illumina Genome Analyzer II (Sus scrofa) (GPL10945) SRA Sus scrofa
Sus scrofa domestica		 adipos intermuscular adipose
9 GSM752039 GOM 685,218 Sichuan Agricultural University 2011-06-30 [HT Sequencing] Illumina Genome Analyzer II (Sus scrofa) (GPL10945) SRA Sus scrofa
Sus scrofa domestica		 skin greater omentum
10 GSM752063 RAD 660,198 Sichuan Agricultural University 2011-06-30 [HT Sequencing] Illumina Genome Analyzer II (Sus scrofa) (GPL10945) SRA Sus scrofa
Sus scrofa domestica		 adipos retroperitoneal adipose
11 GSM752038 ASA 655,809 Sichuan Agricultural University 2011-06-30 [HT Sequencing] Illumina Genome Analyzer II (Sus scrofa) (GPL10945) SRA Sus scrofa
Sus scrofa domestica		 adipos abdominal subcutaneous adipose
12 GSM446690 prenatal, fetus at day 60 587,856 Sichuan Agricultural University 2009-08-31 [HT Sequencing] Illumina Genome Analyzer (Sus scrofa) (GPL9126) SRA Sus scrofa
Sus scrofa domestica		 bone Mixture of all tissues, only discard the bones Three female and three male were pooled.
13 GSM752042 MAD 585,170 Sichuan Agricultural University 2011-06-30 [HT Sequencing] Illumina Genome Analyzer II (Sus scrofa) (GPL10945) SRA Sus scrofa
Sus scrofa domestica		 adipos mesenteric adipose
14 GSM446692 prenatal, fetus at day 90 514,312 Sichuan Agricultural University 2009-08-31 [HT Sequencing] Illumina Genome Analyzer (Sus scrofa) (GPL9126) SRA Sus scrofa
Sus scrofa domestica		 bone Mixture of all tissues, only discard the bones Three female and three male were pooled.
15 GSM446693 prenatal, fetus at day 105 513,658 Sichuan Agricultural University 2009-08-31 [HT Sequencing] Illumina Genome Analyzer (Sus scrofa) (GPL9126) SRA Sus scrofa
Sus scrofa domestica		 bone Mixture of all tissues, only discard the bones Three female and three male were pooled.
16 GSM595679 RNA-Seq_pFF 0 NCMLS Radboud University Nijmegen 2010-09-20 [HT Sequencing] Illumina Genome Analyzer II (Sus scrofa) (GPL10945) SRA Sus scrofa
Sus scrofa domestica		 skin Embryonic fetal fibroblast cells
17 GSM636845 2268 AF, small RNA 0 Jiangxi Agricultural University 2010-12-08 [HT Sequencing] Illumina Genome Analyzer II (Sus scrofa) (GPL10945) SRA Sus scrofa
Sus scrofa domestica		 adipos abdominal fat
18 GSM636848 2270 AF, small RNA 0 Jiangxi Agricultural University 2010-12-08 [HT Sequencing] Illumina Genome Analyzer II (Sus scrofa) (GPL10945) SRA Sus scrofa
Sus scrofa domestica		 adipos abdominal fat
19 GSM653221 2268 AF, mRNA 0 Jiangxi Agricultural University 2011-01-11 [HT Sequencing] Illumina HiSeq 2000 (Sus scrofa) (GPL11429) SRA Sus scrofa
Sus scrofa domestica		 adipos abdominal fat
20 GSM653224 2270 AF, mRNA 0 Jiangxi Agricultural University 2011-01-11 [HT Sequencing] Illumina HiSeq 2000 (Sus scrofa) (GPL11429) SRA Sus scrofa
Sus scrofa domestica		 adipos abdominal fat
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