Gene Expression Omnibus (GEO) Overview Version：2013-05-25Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(516,316)		   Primates
(5,042)		   Rodents
(188,439)		   Mammals
(16,727)		   Vertebrates
(18,617)		   Invertebrates
(38,231)		   Plants
(93,098)		   Bacteria
(39,426)		   Viruses
(1,263)		   Phages
(101)		   Unclassified
(5,385)		   All
(924,376)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(387,571)		   Tiling Array
(22,136)		   cDNA Array
(104,070)		   Oligo Array
(246,081)		   Bead Array
(111,089)		   Protein Array
(5)		   Antibody
(1,156)		   RT-PCR
(4,464)		   HT-Seq
(38,248)		   Other
(7,261)		   All
(924,376)		  
  brain
(2,470)		   blood
(5,025)		   connective
(2,170)		   reproductive
(1,928)		   muscular
(885)		   digestive
(1,227)		   liver
(1,138)		   lung
(1,005)		   urinary
(602)		   endo/exo-crine
(1,518)		   embryo
(2,815)		   adult aerial structure
(785)		   young aerial structure
(466)		   root
(228)		   meristem/growing tissue
(165)		   flower/sexual organ
(418)		   seed/fruit/grain
(160)		   pooled
(1,913)		   unclassified
(13,330)		   all
(38,248)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM337571 endogenous small RNA associated to human Argonaute 2 11,127 Max Planck Institute of Biochemistry 2008-10-27 [HT Sequencing] 454 GS 20 (Homo sapiens) (GPL9178) SRA Homo sapiens
Homo sapiens		 kidney HEK293 cells
2 GSM337570 endogenous small RNA associated to human Argonaute 1 5,298 Max Planck Institute of Biochemistry 2008-10-27 [HT Sequencing] 454 GS 20 (Homo sapiens) (GPL9178) SRA Homo sapiens
Homo sapiens		 kidney HEK293 cells
3 GSM1009422 Nuclear mRNP protection (mRNP-Seq) 0 UMass Medical School 2012-09-25 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens		 kidney HEK293 cells
4 GSM1113454 Kidney Frozen 1 0 OSU 2013-04-03 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens		 kidney Kidney
5 GSM1113456 Kidney Frozen 2 0 OSU 2013-04-03 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens		 kidney Kidney
6 GSM1113462 Kidney FFPE 1 0 OSU 2013-04-03 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens		 kidney Kidney
7 GSM1113464 Kidney FFPE 2 0 OSU 2013-04-03 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens		 kidney Kidney
8 GSM880643 HEK293 cells transfected with phRL-SV40 plasmid 0 Institute of Molecular Genetics of the ASCR 2012-02-24 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens		 kidney HEK293 cells transfected with phRL-SV40 plasmid
9 GSM880644 HEK293 cells transfected with pGL4-SV40 plasmid 0 Institute of Molecular Genetics of the ASCR 2012-02-24 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens		 kidney HEK293 cells transfected with pGL4-SV40 plasmid
10 GSM880645 HEK293 cells transfected with a 1:1 mixture of pBluescript and pEGFP-C1 plasmids 0 Institute of Molecular Genetics of the ASCR 2012-02-24 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens		 kidney HEK293 cells transfected with a 1:1 mixture of pBluescript and pEGFP-C1 plasmids
11 GSM970871 UW_RnaSeq_Kidney_adult-8wks_C57BL/6 0 ENCODE DCC 2012-07-20 [HT Sequencing] AB SOLiD System (Mus musculus) (GPL10010) SRA Mus musculus
Mus musculus		 kidney Kidney
12 GSM471502 BN-Lx_adult_male_whole_kidney 0 Hubrecht Institute 2009-11-17 [HT Sequencing] AB SOLiD System (Rattus norvegicus) (GPL9690) SRA Rattus norvegicus
Rattus norvegicus		 kidney adult_male_whole_kidney
13 GSM471508 SHR_adult_male_whole_kidney 0 Hubrecht Institute 2009-11-17 [HT Sequencing] AB SOLiD System (Rattus norvegicus) (GPL9690) SRA Rattus norvegicus
Rattus norvegicus		 kidney adult_male_whole_kidney
14 GSM1009412 FLAG only:Y14 RIPiT-Seq 0 UMass Medical School 2012-09-25 [HT Sequencing] AB SOLiD System 3.0 (Homo sapiens) (GPL9442) SRA Homo sapiens
Homo sapiens		 kidney HEK293 cells
15 GSM1009413 FLAG only:PHGDH RIPiT-Seq 0 UMass Medical School 2012-09-25 [HT Sequencing] AB SOLiD System 3.0 (Homo sapiens) (GPL9442) SRA Homo sapiens
Homo sapiens		 kidney HEK293 cells
16 GSM1009414 FLAG-eIF4AIII:Y14 Rep 1 RIPiT-Seq 0 UMass Medical School 2012-09-25 [HT Sequencing] AB SOLiD System 3.0 (Homo sapiens) (GPL9442) SRA Homo sapiens
Homo sapiens		 kidney HEK293 cells
17 GSM1009415 FLAG-eIF4AIII:Y14 Rep 2 RIPiT-Seq 0 UMass Medical School 2012-09-25 [HT Sequencing] AB SOLiD System 3.0 (Homo sapiens) (GPL9442) SRA Homo sapiens
Homo sapiens		 kidney HEK293 cells
18 GSM1009416 FLAG-Magoh:eIF4AIII Rep 1 RIPiT-Seq 0 UMass Medical School 2012-09-25 [HT Sequencing] AB SOLiD System 3.0 (Homo sapiens) (GPL9442) SRA Homo sapiens
Homo sapiens		 kidney HEK293 cells
19 GSM1009417 FLAG-Magoh:eIF4AIII Rep 2 RIPiT-Seq 0 UMass Medical School 2012-09-25 [HT Sequencing] AB SOLiD System 3.0 (Homo sapiens) (GPL9442) SRA Homo sapiens
Homo sapiens		 kidney HEK293 cells
20 GSM1009418 FLAG-Magoh:eIF4AIII Rep 3 RIPiT-Seq 0 UMass Medical School 2012-09-25 [HT Sequencing] AB SOLiD System 3.0 (Homo sapiens) (GPL9442) SRA Homo sapiens
Homo sapiens		 kidney HEK293 cells
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