Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(1,697)
  SAGE RsaI
(3)
  SAGE Sau3A
(54)
  MPSS
(507)
  GeneChip
(441,758)
  Tiling Array
(24,730)
  cDNA Array
(109,124)
  Oligo Array
(288,250)
  Bead Array
(148,432)
  Protein Array
(5)
  Antibody
(1,287)
  RT-PCR
(6,509)
  HT-Seq
(64,850)
  Other
(13,899)
  All
(1,101,311)
 
  brain
(3,836)
  blood
(8,820)
  connective
(3,686)
  reproductive
(2,705)
  muscular
(1,949)
  digestive
(2,864)
  liver
(1,754)
  lung
(1,526)
  urinary
(1,086)
  endo/exo-crine
(2,518)
  embryo
(5,613)
  adult aerial structure
(1,222)
  young aerial structure
(694)
  root
(369)
  meristem/growing tissue
(201)
  flower/sexual organ
(596)
  seed/fruit/grain
(267)
  pooled
(2,869)
  unclassified
(22,275)
  all
(64,850)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM337571 endogenous small RNA associated to human Argonaute 2 11,127 Max Planck Institute of Biochemistry 2008-10-27 [HT Sequencing] 454 GS 20 (Homo sapiens) (GPL9178) SRA Homo sapiens
Homo sapiens
kidney HEK293 cells
2 GSM337570 endogenous small RNA associated to human Argonaute 1 5,298 Max Planck Institute of Biochemistry 2008-10-27 [HT Sequencing] 454 GS 20 (Homo sapiens) (GPL9178) SRA Homo sapiens
Homo sapiens
kidney HEK293 cells
3 GSM1009422 Nuclear mRNP protection (mRNP-Seq) 0 UMass Medical School 2012-09-25 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens
kidney HEK293 cells
4 GSM1113454 Kidney Frozen 1 0 OSU 2013-04-03 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens
kidney Kidney
5 GSM1113456 Kidney Frozen 2 0 OSU 2013-04-03 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens
kidney Kidney
6 GSM1113462 Kidney FFPE 1 0 OSU 2013-04-03 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens
kidney Kidney
7 GSM1113464 Kidney FFPE 2 0 OSU 2013-04-03 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens
kidney Kidney
8 GSM1142038 HEK293 cells transfected with pCag-EGFP plasmid. 0 Institute of Molecular Genetics of the ASCR 2013-05-15 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens
kidney HEK293 cells transfected with pCag-EGFP plasmid.
9 GSM1142039 HEK293 cells transfected with pCag-EGFP_mosIR plasmid. 0 Institute of Molecular Genetics of the ASCR 2013-05-15 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens
kidney HEK293 cells transfected with pCag-EGFP_mosIR plasmid.
10 GSM1272522 mir1180-3p 0 UCSB 2013-11-21 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens
kidney HEK 293 cells
11 GSM1272523 mir1260a-5p 0 UCSB 2013-11-21 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens
kidney HEK 293 cells
12 GSM1272524 mir1271-5p 0 UCSB 2013-11-21 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens
kidney HEK 293 cells
13 GSM1272525 mir1301-3p 0 UCSB 2013-11-21 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens
kidney HEK 293 cells
14 GSM1272526 mir3613-5p 0 UCSB 2013-11-21 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens
kidney HEK 293 cells
15 GSM1272527 mir550-3p 0 UCSB 2013-11-21 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens
kidney HEK 293 cells
16 GSM1272528 Replicate mir3613-5p 0 UCSB 2013-11-21 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens
kidney HEK 293 cells
17 GSM1272529 Replicate mir1180-3p 0 UCSB 2013-11-21 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens
kidney HEK 293 cells
18 GSM1272530 Replicate mir1260a-5p 0 UCSB 2013-11-21 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens
kidney HEK 293 cells
19 GSM1272531 Replicate mir1271-5p 0 UCSB 2013-11-21 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens
kidney HEK 293 cells
20 GSM1272532 Replicate mir1301-3p 0 UCSB 2013-11-21 [HT Sequencing] AB SOLiD 4 System (Homo sapiens) (GPL13393) SRA Homo sapiens
Homo sapiens
kidney HEK 293 cells
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