Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(33,137)
  Primates
(196)
  Rodents
(10,648)
  Mammals
(1,806)
  Vertebrates
(771)
  Invertebrates
(1,113)
  Plants
(7,693)
  Bacteria
(2,917)
  Viruses
(10)
  Phages
(0)
  Unclassified
(511)
  All
(58,828)
 
  SAGE NlaIII
(19)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(68)
  GeneChip
(24,200)
  Tiling Array
(868)
  cDNA Array
(7,370)
  Oligo Array
(14,147)
  Bead Array
(9,468)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(372)
  HT-Seq
(1,870)
  Other
(446)
  All
(58,828)
 
  brain
(2)
  blood
(0)
  connective
(0)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(14)
  young aerial structure
(40)
  root
(4)
  meristem/growing tissue
(2)
  flower/sexual organ
(4)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(2)
  all
(68)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM602678 leaf sample 2 (XLe2) 39,102 Heinrich-Heine-University Duesseldorf 2010-09-30 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
leaf young leaves
2 GSM602677 leaf sample 1 (XLe1) 39,102 Heinrich-Heine-University Duesseldorf 2010-09-30 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
leaf young leaves
3 GSM602676 meristem sample 2 (XMe2) 39,102 Heinrich-Heine-University Duesseldorf 2010-09-30 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue shoot apical meristem
4 GSM602675 meristem sample 1 (XMe1) 39,102 Heinrich-Heine-University Duesseldorf 2010-09-30 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue shoot apical meristem
5 GSM460176 Tetraploid Col-0 (line 1326-12) vs tetraploid Ler-0 (line 3116-6) seedlings Replicate 4 39,102 Technische Universität München, WZW 2009-10-08 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Tetraploid Col-0 (line 1326-12) vs tetraploid Ler-0 (line 3116-6) seedlings Replicate 4
6 GSM460175 Tetraploid Col-0 (line 1326-19) vs tetraploid Ler-0 (line 1026-10) seedlings Replicate 3 39,102 Technische Universität München, WZW 2009-10-08 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Tetraploid Col-0 (line 1326-19) vs tetraploid Ler-0 (line 1026-10) seedlings Replicate 3
7 GSM460174 Tetraploid Col-0 (line 1326-26) vs tetraploid Ler-0 (line 1026-40) seedlings Replicate 2 39,102 Technische Universität München, WZW 2009-10-08 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Tetraploid Col-0 (line 1326-26) vs tetraploid Ler-0 (line 1026-40) seedlings Replicate 2
8 GSM460173 Tetraploid Col-0 (line 1326-28) vs tetraploid Ler-0 (line 1026-41) seedlings Replicate 1 39,102 Technische Universität München, WZW 2009-10-08 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Tetraploid Col-0 (line 1326-28) vs tetraploid Ler-0 (line 1026-41) seedlings Replicate 1
9 GSM460172 Diploid Ler-0 vs diploid Col-0 seedlings Replicate 4 39,102 Technische Universität München, WZW 2009-10-08 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Diploid Ler-0 vs diploid Col-0 seedlings Replicate 4
10 GSM460171 Diploid Ler-0 vs diploid Col-0 seedlings Replicate 3 39,102 Technische Universität München, WZW 2009-10-08 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Diploid Ler-0 vs diploid Col-0 seedlings Replicate 3
11 GSM460170 Diploid Col-0 vs diploid Ler-0 seedlings Replicate 2 39,102 Technische Universität München, WZW 2009-10-08 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Diploid Col-0 vs diploid Ler-0 seedlings Replicate 2
12 GSM460169 Diploid Col-0 vs diploid Ler-0 seedlings Replicate 1 39,102 Technische Universität München, WZW 2009-10-08 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Diploid Col-0 vs diploid Ler-0 seedlings Replicate 1
13 GSM460168 Tetraploid F2 vs tetraploid F3 Col-0 (line 1326-12) seedlings Replicate 4 39,102 Technische Universität München, WZW 2009-10-08 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Tetraploid F2 vs tetraploid F3 Col-0 (line 1326-12) seedlings Replicate 4
14 GSM460167 Tetraploid F2 vs tetraploid F3 Col-0 (line 1326-19) seedlings Replicate 3 39,102 Technische Universität München, WZW 2009-10-08 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Tetraploid F2 vs tetraploid F3 Col-0 (line 1326-19) seedlings Replicate 3
15 GSM460166 Tetraploid F2 vs tetraploid F3 Col-0 (line 1326-26) seedlings Replicate 2 39,102 Technische Universität München, WZW 2009-10-08 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Tetraploid F2 vs tetraploid F3 Col-0 (line 1326-26) seedlings Replicate 2
16 GSM460165 Tetraploid F2 vs tetraploid F3 Col-0 (line 1326-28) seedlings Replicate 1 39,102 Technische Universität München, WZW 2009-10-08 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Tetraploid F2 vs tetraploid F3 Col-0 (line 1326-28) seedlings Replicate 1
17 GSM460164 Tetraploid F2 vs tetraploid F3 Ler-0 (line 3116-6) seedlings Replicate 4 39,102 Technische Universität München, WZW 2009-10-08 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Tetraploid F2 vs tetraploid F3 Ler-0 (line 3116-6) seedlings Replicate 4
18 GSM460163 Tetraploid F2 vs tetraploid F3 Ler-0 (line 1026-10) seedlings Replicate 3 39,102 Technische Universität München, WZW 2009-10-08 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Tetraploid F2 vs tetraploid F3 Ler-0 (line 1026-10) seedlings Replicate 3
19 GSM460162 Tetraploid F2 vs tetraploid F3 Ler-0 (line 1026-40) seedlings Replicate 2 39,102 Technische Universität München, WZW 2009-10-08 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Tetraploid F2 vs tetraploid F3 Ler-0 (line 1026-40) seedlings Replicate 2
20 GSM460161 Tetraploid F2 vs tetraploid F3 Ler-0 (line 1026-41) seedlings Replicate 1 39,102 Technische Universität München, WZW 2009-10-08 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Tetraploid F2 vs tetraploid F3 Ler-0 (line 1026-41) seedlings Replicate 1
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