Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(1,697)
  SAGE RsaI
(3)
  SAGE Sau3A
(54)
  MPSS
(507)
  GeneChip
(441,758)
  Tiling Array
(24,730)
  cDNA Array
(109,124)
  Oligo Array
(288,250)
  Bead Array
(148,432)
  Protein Array
(5)
  Antibody
(1,287)
  RT-PCR
(6,509)
  HT-Seq
(64,850)
  Other
(13,899)
  All
(1,101,311)
 
  brain
(37)
  blood
(13)
  connective
(10)
  reproductive
(12)
  muscular
(7)
  digestive
(10)
  liver
(6)
  lung
(4)
  urinary
(5)
  endo/exo-crine
(13)
  embryo
(3)
  adult aerial structure
(49)
  young aerial structure
(121)
  root
(36)
  meristem/growing tissue
(36)
  flower/sexual organ
(15)
  seed/fruit/grain
(3)
  pooled
(26)
  unclassified
(101)
  all
(507)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM612228 Col, apex, replicate 2 37,685 Nationali institute for basic biology 2010-10-22 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue Shoot apex of Col.
2 GSM612229 Col, apex, replicate 1 37,685 Nationali institute for basic biology 2010-10-22 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue Shoot apex of Col.
3 GSM612230 enf1-6, apex, replicate 1 37,685 Nationali institute for basic biology 2010-10-22 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue Shoot apex of enf1-6
4 GSM612231 enf1-1, apex, replicate 1 37,685 Nationali institute for basic biology 2010-10-22 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue Shoot apex of enf1-1
5 GSM612232 Col, apex, replicate 3 37,685 Nationali institute for basic biology 2010-10-22 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue Shoot apex of Col.
6 GSM612233 enf1-1, apex, replicate 2 37,685 Nationali institute for basic biology 2010-10-22 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue Shoot apex of enf1-1
7 GSM612234 enf1-6, apex, replicate 2 37,685 Nationali institute for basic biology 2010-10-22 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue Shoot apex of enf1-6
8 GSM612235 enf1-1, apex, replicate 3 37,685 Nationali institute for basic biology 2010-10-22 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue Shoot apex of enf1-1
9 GSM612236 enf1-6, apex, replicate 3 37,685 Nationali institute for basic biology 2010-10-22 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue Shoot apex of enf1-6
10 GSM612237 Col, apex, replicate 4 37,685 Nationali institute for basic biology 2010-10-22 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue Shoot apex of Col.
11 GSM602675 meristem sample 1 (XMe1) 39,102 Heinrich-Heine-University Duesseldorf 2010-09-30 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue shoot apical meristem
12 GSM602676 meristem sample 2 (XMe2) 39,102 Heinrich-Heine-University Duesseldorf 2010-09-30 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue shoot apical meristem
13 GSM539889 35S:WIND1 callus replicate 1 37,478 National Institute of Advanced Industrial Science and Technology 2010-05-03 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299) RNA Arabidopsis thaliana
Arabidopsis thaliana
callus Callus-like Arabidospsis thaliana expressing 35S:WIND1 with no treatment
14 GSM539890 35S:WIND1 callus replicate 2 37,478 National Institute of Advanced Industrial Science and Technology 2010-05-03 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299) RNA Arabidopsis thaliana
Arabidopsis thaliana
callus Callus-like Arabidospsis thaliana expressing 35S:WIND1 with no treatment
15 GSM539891 35S:WIND1 callus replicate 3 37,478 National Institute of Advanced Industrial Science and Technology 2010-05-03 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299) RNA Arabidopsis thaliana
Arabidopsis thaliana
callus Callus-like Arabidospsis thaliana expressing 35S:WIND1 with no treatment
16 GSM539892 T87 callus replicate 1 37,478 National Institute of Advanced Industrial Science and Technology 2010-05-03 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299) RNA Arabidopsis thaliana
Arabidopsis thaliana
callus Callus of T87 cell cultured with MS medium containing 500 nM NAA
17 GSM539893 T87 callus replicate 2 37,478 National Institute of Advanced Industrial Science and Technology 2010-05-03 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299) RNA Arabidopsis thaliana
Arabidopsis thaliana
callus Callus of T87 cell cultured with MS medium containing 500 nM NAA
18 GSM539894 T87 callus replicate 3 37,478 National Institute of Advanced Industrial Science and Technology 2010-05-03 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299) RNA Arabidopsis thaliana
Arabidopsis thaliana
callus Callus of T87 cell cultured with MS medium containing 500 nM NAA
19 GSM539895 2,4-D-induced callus replicate 1 37,478 National Institute of Advanced Industrial Science and Technology 2010-05-03 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299) RNA Arabidopsis thaliana
Arabidopsis thaliana
callus 2,4-D induced callus cultured with MS medium containing 500 micro g/L 2,4-D
20 GSM539896 2,4-D-induced callus replicate 2 37,478 National Institute of Advanced Industrial Science and Technology 2010-05-03 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299) RNA Arabidopsis thaliana
Arabidopsis thaliana
callus 2,4-D induced callus cultured with MS medium containing 500 micro g/L 2,4-D
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