Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(377,145)		   Tiling Array
(21,846)		   cDNA Array
(103,476)		   Oligo Array
(239,584)		   Bead Array
(106,999)		   Protein Array
(5)		   Antibody
(1,152)		   RT-PCR
(3,959)		   HT-Seq
(35,574)		   Other
(6,909)		   All
(898,944)		  
  brain
(35)		   blood
(13)		   connective
(10)		   reproductive
(12)		   muscular
(7)		   digestive
(10)		   liver
(6)		   lung
(4)		   urinary
(5)		   endo/exo-crine
(13)		   embryo
(3)		   adult aerial structure
(49)		   young aerial structure
(85)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(20)		   unclassified
(97)		   all
(439)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM646169 Ler vs hy5 1 45,220 CIB-CSIC 2010-12-27 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:hy5-1 Ler title:Ler vs hy5 1 description:Biological replicate 1 of 3. 3-week-old Arabidopsis plants exposed 1 day at 4ºC.
2 GSM646170 Ler vs hy5 2 45,220 CIB-CSIC 2010-12-27 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:hy5-1 Ler title:Ler vs hy5 2 description:Biological replicate 2 of 3. 3-week-old Arabidopsis plants exposed 1 day at 4ºC.
3 GSM646171 Ler vs hy5 3 45,220 CIB-CSIC 2010-12-27 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:hy5-1 Ler title:Ler vs hy5 3 description:Biological replicate 3 of 3. 3-week-old Arabidopsis plants exposed 1 day at 4ºC.
4 GSM132997 Control_vs_Pathogen_replicate_1 39,941 Laval University 2006-08-31 [MPSS] Agilent-012600 Arabidopsis 3 Oligo Microarray (4142A (Feature Number version) (GPL2871) RNA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:Control Arabidopsis Diseased Arabidopsis title:Control_vs_Pathogen_replicate_1 description:Supplementary file contain raw data obained after scan.
5 GSM133000 Control_vs_Pathogen_replicate_2 39,941 Laval University 2006-08-31 [MPSS] Agilent-012600 Arabidopsis 3 Oligo Microarray (4142A (Feature Number version) (GPL2871) RNA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:Control Arabidopsis Diseased Arabidopsis title:Control_vs_Pathogen_replicate_2 description:Supplementary file contains raw data obained after scan.
6 GSM133001 Control_vs_Pathogen_replicate_3 39,941 Laval University 2006-08-31 [MPSS] Agilent-012600 Arabidopsis 3 Oligo Microarray (4142A (Feature Number version) (GPL2871) RNA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:Control Arabidopsis Diseased Arabidopsis title:Control_vs_Pathogen_replicate_3 description:Supplementary file contains raw data obained after scan.
7 GSM133005 Control_vs_Silicon_supplemented_replicate_1 39,941 Laval University 2006-08-31 [MPSS] Agilent-012600 Arabidopsis 3 Oligo Microarray (4142A (Feature Number version) (GPL2871) RNA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:Control Arabidopsis Silicon supplemented Arabidopsis title:Control_vs_Silicon_supplemented_replicate_1 description:Supplementary file contains raw data obained after scan.
8 GSM133008 Control_vs_Silicon_supplemented_replicate_2 39,941 Laval University 2006-08-31 [MPSS] Agilent-012600 Arabidopsis 3 Oligo Microarray (4142A (Feature Number version) (GPL2871) RNA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:Control Arabidopsis Silicon supplemented Arabidopsis title:Control_vs_Silicon_supplemented_replicate_2 description:Supplementary file contains raw data obained after scan.
9 GSM133013 Control_vs_Silicon_supplemented_replicate_3 39,941 Laval University 2006-08-31 [MPSS] Agilent-012600 Arabidopsis 3 Oligo Microarray (4142A (Feature Number version) (GPL2871) RNA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:Control Arabidopsis Silicon supplemented Arabidopsis title:Control_vs_Silicon_supplemented_replicate_3 description:Supplementary file contains raw data obained after scan.
10 GSM133481 Pathogen_vs_Control_replicate_1 39,941 Laval University 2006-09-01 [MPSS] Agilent-012600 Arabidopsis 3 Oligo Microarray (4142A (Feature Number version) (GPL2871) RNA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:Diseased Arabidopsis Control Arabidopsis title:Pathogen_vs_Control_replicate_1 description:Supplementary file contains data obtained after scan
11 GSM133482 Pathogen_vs_Control_replicate_2 39,941 Laval University 2006-09-01 [MPSS] Agilent-012600 Arabidopsis 3 Oligo Microarray (4142A (Feature Number version) (GPL2871) RNA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:Diseased Arabidopsis Control Arabidopsis title:Pathogen_vs_Control_replicate_2 description:Supplementary file contains data obtained after scan
12 GSM133483 Pathogen_vs_Control_replicate_3 39,941 Laval University 2006-09-01 [MPSS] Agilent-012600 Arabidopsis 3 Oligo Microarray (4142A (Feature Number version) (GPL2871) RNA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:Diseased Arabidopsis Control Arabidopsis title:Pathogen_vs_Control_replicate_3 description:Supplementary file contains data obtained after scan
13 GSM133484 Pathogen_vs_Silicon-Pathogen_replicate_1 39,941 Laval University 2006-09-01 [MPSS] Agilent-012600 Arabidopsis 3 Oligo Microarray (4142A (Feature Number version) (GPL2871) RNA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:Diseased Arabidopsis Diseased and Si supplemented Arabidopsis title:Pathogen_vs_Silicon-Pathogen_replicate_1 description:Supplementary file contains data obtained after scan
14 GSM133485 Pathogen_vs_Silicon-Pathogen_replicate_2 39,941 Laval University 2006-09-01 [MPSS] Agilent-012600 Arabidopsis 3 Oligo Microarray (4142A (Feature Number version) (GPL2871) RNA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:Diseased Arabidopsis Diseased and Si supplemented Arabidopsis title:Pathogen_vs_Silicon-Pathogen_replicate_2 description:Supplementary file contains data obtained after scan
15 GSM133486 Pathogen_vs_Silicon-Pathogen_replicate_3 39,941 Laval University 2006-09-01 [MPSS] Agilent-012600 Arabidopsis 3 Oligo Microarray (4142A (Feature Number version) (GPL2871) RNA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:Diseased Arabidopsis Diseased and Si supplemented Arabidopsis title:Pathogen_vs_Silicon-Pathogen_replicate_3 description:Supplementary file contains data obtained after scan
16 GSM133487 Silicon-supplemented_vs_Control_replicate_1 39,941 Laval University 2006-09-01 [MPSS] Agilent-012600 Arabidopsis 3 Oligo Microarray (4142A (Feature Number version) (GPL2871) RNA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:Silicon supplemented Arabidopsis Control Arabidopsis title:Silicon-supplemented_vs_Control_replicate_1 description:Supplementary file contains data obtained after scan
17 GSM133488 Silicon-supplemented_vs_Control_replicate_2 39,941 Laval University 2006-09-01 [MPSS] Agilent-012600 Arabidopsis 3 Oligo Microarray (4142A (Feature Number version) (GPL2871) RNA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:Silicon supplemented Arabidopsis Control Arabidopsis title:Silicon-supplemented_vs_Control_replicate_2 description:Supplementary file contains data obtained after scan
18 GSM133489 Silicon-supplemented_vs_Control_replicate_3 39,941 Laval University 2006-09-01 [MPSS] Agilent-012600 Arabidopsis 3 Oligo Microarray (4142A (Feature Number version) (GPL2871) RNA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:Silicon supplemented Arabidopsis Control Arabidopsis title:Silicon-supplemented_vs_Control_replicate_3 description:Supplementary file contains data obtained after scan
19 GSM133491 Silicon-Pathogen_vs_Pathogen_replicate_1 39,941 Laval University 2006-09-01 [MPSS] Agilent-012600 Arabidopsis 3 Oligo Microarray (4142A (Feature Number version) (GPL2871) RNA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:Diseased and Si supplemented Arabidopsis Diseased Arabidopsis title:Silicon-Pathogen_vs_Pathogen_replicate_1 description:Supplementary file contains data obtained after scan
20 GSM133493 Silicon-Pathogen_vs_Pathogen_replicate_2 39,941 Laval University 2006-09-01 [MPSS] Agilent-012600 Arabidopsis 3 Oligo Microarray (4142A (Feature Number version) (GPL2871) RNA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:Diseased and Si supplemented Arabidopsis Diseased Arabidopsis title:Silicon-Pathogen_vs_Pathogen_replicate_2 description:Supplementary file contains data obtained after scan
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