Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(204)		   Primates
(1)		   Rodents
(191)		   Mammals
(6)		   Vertebrates
(19)		   Invertebrates
(51)		   Plants
(84)		   Bacteria
(74)		   Viruses
(1)		   Phages
(0)		   Unclassified
(1)		   All
(632)		  
  SAGE NlaIII
(8)		   SAGE RsaI
(0)		   SAGE Sau3A
(1)		   MPSS
(5)		   GeneChip
(266)		   Tiling Array
(26)		   cDNA Array
(170)		   Oligo Array
(152)		   Bead Array
(1)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(3)		   All
(632)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Analysis of gene expression in Nicotiana benthamiana following NbCD1- or NbCD3-overexpression using SuperSAGE Array1 (GSE4686) [Oligo Array] Nicotiana benthamiana SuperSAGE Array des (GPL3679) Shinshu University 2006-04-19 Nicotiana benthamiana
Nicotiana benthamiana		 462
(154 x 3) 		3 by_platform
by_series
2 Analysis of gene expression in rice mature leaf and cultured cell suspension using Rice SuperSAGE Array1 (GSE4685) [Oligo Array] Rice SuperSAGE Array1 (GPL3678) Shinshu University 2006-04-19 Oryza sativa
Oryza sativa		 2,000
(1,000 x 2) 		1 1 by_platform
by_series
3 Evaluation of performance of Arabidopsis Pathoarray 464_001: comparison with ATH1 (GSE4632) [Oligo Array] The miniarray (Arabidopsis Pathoarray) 464_001 (GPL3638) National Institute for Basic Biology 2006-04-07 Arabidopsis thaliana
Arabidopsis thaliana		 2,304
(576 x 4) 		4 by_platform
by_series
4 Transcriptional analysis of select CfMNPV genes and some antisense transcripts by an oligonucleotide microarray (GSE4783) [Oligo Array] Yang et. al. Oligoarray of CfMNPV select ORFs (GPL3719) University of Guelph 2006-05-05 Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV		 2,688
(192 x 14) 		14 by_platform
by_series
5 Transcriptional p of B. burgdorferi containing a unique bosR allele identifies a putative oxidative stress regulon (GSE4856) [Oligo Array] Transcriptional Profiling of Borrelia burgdorferi containing a unique bosR allele (GPL3772) Texas A&M University HSC 2006-05-16 Borrelia burgdorferi
Borrelia burgdorferi		 3,424
(1,712 x 2) 		2 by_platform
by_series
6 Regulation of 22q11 orthologous genes during mouse development (GSE5050) [Oligo Array] Tor Vergata Mus musculus 200 22q11Ds chip (GPL3634) Tor Vergata university 2006-06-12 Mus musculus
Mus musculus		 4,032
(288 x 14) 		14 by_platform
by_series
7 Gene Expression in Granulosal Cells From Persistent Follicles (GSE4930) [Oligo Array] MSU BLO 8400 (GPL3810) West Virginia University 2006-05-25 Bos taurus
Bos taurus		 8,329
(8,329 x 1) 		1 by_platform
by_series
8 chpT depletion data (GSE4617) [Oligo Array] Bauer Center for Genomics Research Caulobacter crescentus 50mer array (GPL2856) MIT 2006-04-05 Caulobacter vibrioides
Caulobacter vibrioides		 11,520
(3,840 x 3) 		3 by_platform
by_series
9 Comparison of miRNA expression in Dickkopf1-expressing versus control newborn mouse skin (GSE4723) [Oligo Array] RAKEv2 (GPL3699) University of Pennsylvania 2006-04-25 Mus musculus
Mus musculus		 13,824
(4,608 x 3) 		3 by_platform
by_series
10 Analysis of heart tissue from 2 and 15-16 month old Wt and Taut -/- Mice (GSE4814) [Oligo Array] BMFZ Mouse heart microarray 2005 (GPL3748) BMFZ 2006-05-12 Mus musculus
Mus musculus		 13,824
(768 x 18) 		18 by_platform
by_series
11 Broad, ectopic expression of the sperm protein, PLCZ1 induces parthenogenesis and ovarian tumours in mice (GSE4822) [Oligo Array] Riken Mouse 4K miRNA array M8.1 (GPL5938) RIKEN 2006-05-12 Mus musculus
Mus musculus		 15,872
(3,968 x 4) 		4 by_platform
by_series
12 E. coli Transcriptome Dynamics during the Transition from Anaerobic to Aerobic Conditions (GSE4735) [Oligo Array] MWG E. coli K12 Array (GPL534) The University of Sheffield 2006-04-28 Escherichia coli
Escherichia coli		 18,432
(4,608 x 4) 		4 by_platform
by_series
13 Aerobic transcriptional responses of Escherichia coli to NO under defined chemostat conditions. (GSE5075) [Oligo Array] MWG E. coli K12 Array (GPL534) University of Sheffield 2006-06-14 Escherichia coli
Escherichia coli		 18,432
(4,608 x 4) 		4 by_platform
by_series
14 Anaerobic transcriptional responses of Escherichia coli to NO under defined chemostat conditions. (GSE5076) [Oligo Array] MWG E. coli K12 Array (GPL534) University of Sheffield 2006-06-14 Escherichia coli
Escherichia coli		 18,432
(4,608 x 4) 		4 by_platform
by_series
15 Anaerobic NO-exposed Chemostat Comparison of Wt & norR mutant Responses (GSE5084) [Oligo Array] MWG E. coli K12 Array (GPL534) University of Sheffield 2006-06-15 Escherichia coli
Escherichia coli		 18,432
(4,608 x 4) 		4 by_platform
by_series
16 Aerobic NO-exposed Chemostat Comparison of Wt & norR mutant Responses (GSE5137) [Oligo Array] MWG E. coli K12 Array (GPL534) University of Sheffield 2006-06-23 Escherichia coli
Escherichia coli		 18,432
(4,608 x 4) 		4 by_platform
by_series
17 Aerobic NO-exposed Chemostat Comparison of Wt & hmp mutant Responses (GSE5139) [Oligo Array] MWG E. coli K12 Array (GPL534) University of Sheffield 2006-06-23 Escherichia coli
Escherichia coli		 18,432
(4,608 x 4) 		4 by_platform
by_series
18 Broad, ectopic expression of the sperm protein, PLCZ1 induces parthenogenesis and ovarian tumours in mice (GSE4822) [Oligo Array] Riken Mouse 4K miRNA array M8.0 (GPL3754) RIKEN 2006-05-12 Mus musculus
Mus musculus		 19,840
(3,968 x 5) 		5 by_platform
by_series
19 Broad, ectopic expression of the sperm protein, PLCZ1 induces parthenogenesis and ovarian tumours in mice (GSE4822) [Oligo Array] Riken Mouse 4K miRNA array M8.2 (GPL5939) RIKEN 2006-05-12 Mus musculus
Mus musculus		 19,840
(3,968 x 5) 		5 by_platform
by_series
20 Response and adaptation to growth with low glucose concentration (GSE4706) [Oligo Array] MWG E. coli K12 Array (GPL534) EAWAG 2006-04-24 Escherichia coli
Escherichia coli		 27,648
(4,608 x 6) 		6 by_platform
by_series
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