Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(375)
  Primates
(0)
  Rodents
(326)
  Mammals
(28)
  Vertebrates
(18)
  Invertebrates
(49)
  Plants
(116)
  Bacteria
(60)
  Viruses
(0)
  Phages
(0)
  Unclassified
(5)
  All
(978)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(305)
  Tiling Array
(21)
  cDNA Array
(99)
  Oligo Array
(223)
  Bead Array
(207)
  Protein Array
(0)
  Antibody
(5)
  RT-PCR
(9)
  HT-Seq
(108)
  Other
(1)
  All
(978)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Genome-wide analysis of melanoma cell lines using high-density single-nucleotide polymorphism arrays. (GSE9003) [Oligo Array] Sentrix BeadChip Array HumanHap300 Genotyping BeadChip 317K, TagSNP Phase I, v1.1 (GPL5711) QIMR 2007-09-10 Homo sapiens
Homo sapiens
24,130,228
(317,503 x 76)
76 by_platform
by_series
2 Expression quantitative trait loci (eQTL) analysis of Brassica rapa under varying soil phosphorus (P) supplies (GSE27052) [Oligo Array] Agilent Custom Brassica 60-mer two-color microarray (GPL8513) University of Western Australia 2011-02-03 Brassica rapa
Brassica rapa
17,862,240
(105,072 x 170)
170 by_platform
by_series
3 Evaluating the restoration of DNA derived from archival formalin-fixed paraffin embedded tissues for genomic profiling by SNP-CGH analysis (GSE43406) [Oligo Array] Illumina Infinium Human CytoSNP FFPE-12v2.1 arrays (GPL16483) The University of Queensland 2013-01-10 Homo sapiens
Homo sapiens
11,287,371
(262,497 x 43)
11 1 4 5 22 by_platform
by_series
4 Genome-wide analysis of esopageal adenocarcinoma tumor biopsy using high-density single-nucleotide polymorphism arrays. (GSE10506) [Oligo Array] Sentrix BeadChip Array HumanHap300 Genotyping BeadChip 317K, TagSNP Phase I, v1.1 (GPL5711) Queensland Institute of Medical Research 2008-02-13 Homo sapiens
Homo sapiens
7,620,072
(317,503 x 24)
24 by_platform
by_series
5 Examine gene expression in maize pulvini in gravitropsim (GSE26071) [Oligo Array] Maize Pioneer Hi-Bred 105K mRNA Microarray (GPL10837) University Of Adelaide 2010-12-15 Zea mays
Zea mays
6,514,464
(105,072 x 62)
62 by_platform
by_series
6 Mutational Variation in Gene Expression (GSE49815) [Oligo Array] NimbleGen Drosophila serrata Custom array [110608_Dser_SC_expr.ndf] (GPL17560) University of Queensland 2013-08-12 Drosophila serrata
Drosophila serrata
6,403,216
(78,088 x 82)
2 80 by_platform
by_series
7 Mutational Variation in Gene Expression for Sexually Selected Lines (GSE54777) [Oligo Array] NimbleGen Drosophila serrata Custom array [110608_Dser_SC_expr.ndf] (GPL17560) University of Queensland 2014-02-07 Drosophila serrata
Drosophila serrata
6,403,216
(78,088 x 82)
2 80 by_platform
by_series
8 Effect of Advanced Paternal Age on Copy Number Variation in Offspring (commercial array) (GSE29455) [Oligo Array] Agilent-014695 Mouse Genome CGH Microarray 244A (G4415A) - alternative version (GPL6091) The University of Queensland 2011-05-23 Mus musculus
Mus musculus
5,178,844
(235,402 x 22)
22 by_platform
by_series
9 Effect of Advanced Paternal Age on Copy Number Variation in Offspring (GSE29456) [Oligo Array] Agilent-014695 Mouse Genome CGH Microarray 244A (G4415A) - alternative version (GPL6091) The University of Queensland 2011-05-23 Mus musculus
Mus musculus
5,178,844
(235,402 x 22)
22 by_platform
by_series
10 R. microplus expression profiles of larvae pre-attachment and feeding adult female stages in B. indicus and B. taurus (GSE20605) [Oligo Array] Nimblegen Rhipicephalus microplus 385K microarray (GPL10125) DEEDI 2010-03-03 Rhipicephalus microplus
Rhipicephalus microplus
3,857,700
(385,770 x 10)
10 by_platform
by_series
11 Microarray evidence for off target effects and the optimisation of targeted RNAi mediated gene silencing in the cattle tick Rhipicephalus (Boophilus) microplus (GSE27453) [Oligo Array] Nimblegen Rhipicephalus microplus 385K microarray (GPL10125) The University of Queensland 2011-02-22 Rhipicephalus microplus
Rhipicephalus microplus
3,086,160
(385,770 x 8)
8 by_platform
by_series
12 Array-Comparative Genomic Hybridization Reveals Loss of SOCS6 is Associated with Poor Prognosis in Primary Lung Squamous Cell Carcinoma (GSE32058) [Oligo Array] Agilent-013282 Human Genome CGH Microarray 44B (Feature number version) (GPL2879) The Prince Charles Hospital 2011-09-12 Homo sapiens
Homo sapiens
2,745,980
(44,290 x 62)
62 by_platform
by_series
13 FDB1_GM-CSF_Receptor_Mutant_Factorial_Time_Course_Study (GSE3333) [Oligo Array] Adelaide Microarray Facility CompuGen OligoLibrary Mouse 22k Hybrid of v1.0 and v2.1 (GPL2859) Child Health Research Institute 2005-09-20 Mus musculus
Mus musculus
2,672,640
(23,040 x 116)
116 by_platform
by_series
14 cDNA microarray assay of lymph node biopsies diagnosed as lymphoma or as reactive tissue (GSE23647) [Oligo Array] Compugen 19K human v5.0 (GPL10810) St Vincent's Hospital 2010-08-16 Homo sapiens
Homo sapiens
2,320,000
(20,000 x 116)
116 by_platform
by_series
15 The Transcriptional Landscape of Bovine Skeletal Muscle (GSE25554) [Oligo Array] Agilent-015354 Bovine Oligo Microarray (4x44K) (Feature Number version) (GPL7053) CSIRO 2010-11-23 Bos taurus
Bos taurus
2,170,560
(45,220 x 48)
48 by_platform
by_series
16 Gene expression of LNCaP cells grown in 2D cultures and polyethlene glycol-based hydrogels with the presence of synthetic androgen, R1881 (GSE33610) [Oligo Array] Agilent-027516 VPC Human 180K v2 (GPL14873) Queensland University of Technology; University of British Columbia 2011-11-10 Homo sapiens
Homo sapiens
2,170,560
(180,880 x 12)
12 by_platform
by_series
17 A Global Approach to Dissect Palmitate-induced Impairment of Hepatic Glucose Production (GSE52204) [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) Deakin University 2013-11-07 Rattus norvegicus
Rattus norvegicus
2,170,560
(45,220 x 48)
48 by_platform
by_series
18 The genomic distribution of sex-biased genes in Drosophila serrata: X-chromosome demasculanisation, feminisation, and hyper-expression in both sexes (GSE45801) [Oligo Array] NimbleGen Drosophila serrata Custom 12.135K array [110608_Dser_SC_expr_HX12] (GPL16969) The University of Queensland, Australia 2013-04-04 Drosophila serrata
Drosophila serrata
2,047,056
(11,631 x 176)
8 4 142 22 by_platform
by_series
19 Developmental gene expression profiles of the human pathogen Schistosoma japonicum (GSE12704) [Oligo Array] Agilent-016061 QIMR Schistosoma 44k v 1.0 (GPL7160) Queensland Institute of Medical Research 2008-09-08 Schistosoma japonicum
Schistosoma japonicum
2,034,900
(45,220 x 45)
3 42 by_platform
by_series
20 Osteosarcoma is characterized by impaired osteoclastogenesis and antigen presentation compared to normal bone (GSE19276) [Oligo Array] Agilent-012391 Whole Human Genome Oligo Microarray G4112A (Probe Name version) (GPL6848) University of Queensland 2009-12-02 Homo sapiens
Homo sapiens
2,012,577
(41,073 x 49)
49 by_platform
by_series
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