Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(310)		   Primates
(0)		   Rodents
(256)		   Mammals
(18)		   Vertebrates
(12)		   Invertebrates
(40)		   Plants
(100)		   Bacteria
(50)		   Viruses
(0)		   Phages
(0)		   Unclassified
(3)		   All
(790)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(257)		   Tiling Array
(21)		   cDNA Array
(92)		   Oligo Array
(192)		   Bead Array
(158)		   Protein Array
(0)		   Antibody
(5)		   RT-PCR
(4)		   HT-Seq
(60)		   Other
(1)		   All
(790)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Genome-wide analysis of melanoma cell lines using high-density single-nucleotide polymorphism arrays. (GSE9003) [Oligo Array] Sentrix BeadChip Array HumanHap300 Genotyping BeadChip 317K, TagSNP Phase I, v1.1 (GPL5711) QIMR 2007-09-10 Homo sapiens
Homo sapiens		 24,130,228
(317,503 x 76) 		76 by_platform
by_series
2 Expression quantitative trait loci (eQTL) analysis of Brassica rapa under varying soil phosphorus (P) supplies (GSE27052) [Oligo Array] Agilent Custom Brassica 60-mer two-color microarray (GPL8513) University of Western Australia 2011-02-03 Brassica rapa
Brassica rapa		 17,862,240
(105,072 x 170) 		170 by_platform
by_series
3 Genome-wide analysis of esopageal adenocarcinoma tumor biopsy using high-density single-nucleotide polymorphism arrays. (GSE10506) [Oligo Array] Sentrix BeadChip Array HumanHap300 Genotyping BeadChip 317K, TagSNP Phase I, v1.1 (GPL5711) Queensland Institute of Medical Research 2008-02-13 Homo sapiens
Homo sapiens		 7,620,072
(317,503 x 24) 		24 by_platform
by_series
4 Examine gene expression in maize pulvini in gravitropsim (GSE26071) [Oligo Array] Maize Pioneer Hi-Bred 105K mRNA Microarray (GPL10837) University Of Adelaide 2010-12-15 Zea mays
Zea mays		 6,514,464
(105,072 x 62) 		62 by_platform
by_series
5 Effect of Advanced Paternal Age on Copy Number Variation in Offspring (commercial array) (GSE29455) [Oligo Array] Agilent-014695 Mouse Genome CGH Microarray 244A (G4415A) - alternative version (GPL6091) The University of Queensland 2011-05-23 Mus musculus
Mus musculus		 5,178,844
(235,402 x 22) 		22 by_platform
by_series
6 Effect of Advanced Paternal Age on Copy Number Variation in Offspring (GSE29456) [Oligo Array] Agilent-014695 Mouse Genome CGH Microarray 244A (G4415A) - alternative version (GPL6091) The University of Queensland 2011-05-23 Mus musculus
Mus musculus		 5,178,844
(235,402 x 22) 		22 by_platform
by_series
7 R. microplus expression profiles of larvae pre-attachment and feeding adult female stages in B. indicus and B. taurus (GSE20605) [Oligo Array] Nimblegen Rhipicephalus microplus 385K microarray (GPL10125) DEEDI 2010-03-03 Rhipicephalus microplus
Rhipicephalus microplus		 3,857,700
(385,770 x 10) 		10 by_platform
by_series
8 Microarray evidence for off target effects and the optimisation of targeted RNAi mediated gene silencing in the cattle tick Rhipicephalus (Boophilus) microplus (GSE27453) [Oligo Array] Nimblegen Rhipicephalus microplus 385K microarray (GPL10125) The University of Queensland 2011-02-22 Rhipicephalus microplus
Rhipicephalus microplus		 3,086,160
(385,770 x 8) 		8 by_platform
by_series
9 Array-Comparative Genomic Hybridization Reveals Loss of SOCS6 is Associated with Poor Prognosis in Primary Lung Squamous Cell Carcinoma (GSE32058) [Oligo Array] Agilent-013282 Human Genome CGH Microarray 44B (Feature number version) (GPL2879) The Prince Charles Hospital 2011-09-12 Homo sapiens
Homo sapiens		 2,745,980
(44,290 x 62) 		62 by_platform
by_series
10 FDB1_GM-CSF_Receptor_Mutant_Factorial_Time_Course_Study (GSE3333) [Oligo Array] Adelaide Microarray Facility CompuGen OligoLibrary Mouse 22k Hybrid of v1.0 and v2.1 (GPL2859) Child Health Research Institute 2005-09-20 Mus musculus
Mus musculus		 2,672,640
(23,040 x 116) 		116 by_platform
by_series
11 cDNA microarray assay of lymph node biopsies diagnosed as lymphoma or as reactive tissue (GSE23647) [Oligo Array] Compugen 19K human v5.0 (GPL10810) St Vincent's Hospital 2010-08-16 Homo sapiens
Homo sapiens		 2,320,000
(20,000 x 116) 		116 by_platform
by_series
12 The Transcriptional Landscape of Bovine Skeletal Muscle (GSE25554) [Oligo Array] Agilent-015354 Bovine Oligo Microarray (4x44K) (Feature Number version) (GPL7053) CSIRO 2010-11-23 Bos taurus
Bos taurus		 2,170,560
(45,220 x 48) 		48 by_platform
by_series
13 Gene expression of LNCaP cells grown in 2D cultures and polyethlene glycol-based hydrogels with the presence of synthetic androgen, R1881 (GSE33610) [Oligo Array] Agilent-027516 VPC Human 180K v2 (GPL14873) Queensland University of Technology; University of British Columbia 2011-11-10 Homo sapiens
Homo sapiens		 2,170,560
(180,880 x 12) 		12 by_platform
by_series
14 Developmental gene expression profiles of the human pathogen Schistosoma japonicum (GSE12704) [Oligo Array] Agilent-016061 QIMR Schistosoma 44k v 1.0 (GPL7160) Queensland Institute of Medical Research 2008-09-08 Schistosoma japonicum
Schistosoma japonicum		 2,034,900
(45,220 x 45) 		3 42 by_platform
by_series
15 Osteosarcoma is characterized by impaired osteoclastogenesis and antigen presentation compared to normal bone (GSE19276) [Oligo Array] Agilent-012391 Whole Human Genome Oligo Microarray G4112A (Probe Name version) (GPL6848) University of Queensland 2009-12-02 Homo sapiens
Homo sapiens		 2,012,577
(41,073 x 49) 		49 by_platform
by_series
16 The genetics of wound healing in tympanic membranes in rats (GSE17698) [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) University of Western Australia 2009-08-18 Rattus norvegicus
Rattus norvegicus		 1,808,800
(45,220 x 40) 		40 by_platform
by_series
17 Leukocytes from patients with sepsis (GSE5772) [Oligo Array] NHICU Human 19K v1.0 (GPL4274) Nepean Hospital 2006-09-06 Homo sapiens
Homo sapiens		 1,754,416
(18,664 x 94) 		94 by_platform
by_series
18 Differential gene expression in cartilage from the mouse DMM osteoarthritis model (GSE45793) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version) (GPL4134) Murdoch Childrens Research Institute 2013-04-04 Mus musculus
Mus musculus		 1,673,140
(45,220 x 37) 		37 by_platform
by_series
19 Gene expression profiling of metastatic and non-metastatic osteosarcoma biopsies (GSE9508) [Oligo Array] Agilent- Whole Human Genome Oligo Microarray G4112A condensed (GPL6076) University of Queensland 2007-11-02 Homo sapiens
Homo sapiens		 1,601,301
(41,059 x 39) 		39 by_platform
by_series
20 Gene expression profiling classifies lung squamous cell carcinomas with N1 positive lymph nodes (GSE5828) [Oligo Array] PRHU05-S1-0006 (PC Human Operon v2 21k) (GPL3877) The Prince Charles Hospital 2006-09-13 Homo sapiens
Homo sapiens		 1,370,688
(23,232 x 59) 		59 by_platform
by_series
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