Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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[ Top ] > [ 2011-01 ]
Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(806)		   Primates
(0)		   Rodents
(554)		   Mammals
(0)		   Vertebrates
(0)		   Invertebrates
(0)		   Plants
(0)		   Bacteria
(0)		   Viruses
(0)		   Phages
(0)		   Unclassified
(0)		   All
(1,980)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(0)		   Tiling Array
(0)		   cDNA Array
(0)		   Oligo Array
(0)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(1)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(0)		   All
(1,980)		  
Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Population genetic properties of differentiated human copy number polymorphisms (GSE26450) [Oligo Array] Agilent Eichler Human CNP 180K v3.0 (GPL11387) Univerisity of Washington 2011-01-05 Homo sapiens
Homo sapiens		 171,293,360
(180,880 x 947) 		947 by_platform
by_series
2 Population genetic properties of differentiated human copy number polymorphisms (GSE26450) [Oligo Array] Agilent Eichler Human CNP 180K v2.1 (GPL11386) Univerisity of Washington 2011-01-05 Homo sapiens
Homo sapiens		 88,088,560
(180,880 x 487) 		487 by_platform
by_series
3 Identification and functional impact of genomic copy number variants in zebrafish, an important human disease model (Zebrafish Strain CNVs) (CGH ZV81M 2) (GSE28278) [Oligo Array] Agilent-026161 ZV81M (GPL13352) Brigham and Women's Hospital/Harvard Medical School 2011-03-30 Danio rerio
Danio rerio		 74,025,216
(974,016 x 76) 		76 by_platform
by_series
4 MMRC aCGH reference collection (GSE26849) [Oligo Array] Agilent-014693 Human Genome CGH Microarray 244A (Probe name version) (GPL9128) Broad Institute 2011-01-25 Homo sapiens
Homo sapiens		 60,041,790
(236,385 x 254) 		254 by_platform
by_series
5 MMRC expression and aCGH reference collection (GSE26863) [Oligo Array] Agilent-014693 Human Genome CGH Microarray 244A (Probe name version) (GPL9128) Broad Institute 2011-01-25 Homo sapiens
Homo sapiens		 60,041,790
(236,385 x 254) 		254 by_platform
by_series
6 DNA methylation data from human iPS cells, ES cells, cord blood, and keratinocytes (GSE27134) [Oligo Array] NimbleGen Human 2.1M array [100428_HG19_CHARM_HX1] (GPL13134) Johns Hopkins University School of Medicine 2011-02-08 Homo sapiens
Homo sapiens		 51,633,432
(2,151,393 x 24) 		4 3 17 by_platform
by_series
7 Donor cell type influences the epigenome and differentiation potential of human induced pluripotent stem cells (GSE27224) [Oligo Array] NimbleGen Human 2.1M array [100428_HG19_CHARM_HX1] (GPL13134) Children's Hospital, Boston 2011-02-10 Homo sapiens
Homo sapiens		 51,633,432
(2,151,393 x 24) 		4 3 17 by_platform
by_series
8 Donor cell type influences the epigenome and differentiation potential of human induced pluripotent stem cells (GSE27224) [Oligo Array] NimbleGen Human 2.0M array [091020_HG19_CHARM_HX1] (GPL13611) Children's Hospital, Boston 2011-02-10 Homo sapiens
Homo sapiens		 36,573,749
(2,151,397 x 17) 		1 16 by_platform
by_series
9 A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants (1X1M) (GSE28112) [Oligo Array] Agilent-021529 Human CGH Whole Genome Microarray 1x1M (G4447A) (Feature Number version) (GPL8736) The Hospital for Sick Children 2011-03-22 Homo sapiens
Homo sapiens		 35,064,576
(974,016 x 36) 		36 by_platform
by_series
10 DNA methylation data from AML12 cells during EMT (GSE27968) [Oligo Array] NimbleGen Mouse 2.1M array [Feinberg_MM8_Me_HX1] (GPL10680) Johns Hopkins University School of Medicine 2011-03-15 Mus musculus
Mus musculus		 25,974,144
(2,164,512 x 12) 		12 by_platform
by_series
11 Prospective comparison of genome-wide aCGH platforms for the detection of CNVs in MR (NimbleGen) (GSE27251) [Oligo Array] WiCell HG18 WG CGH 385K v2 (GPL7717) University of British Columbia 2011-02-11 Homo sapiens
Homo sapiens		 23,446,920
(390,782 x 60) 		60 by_platform
by_series
12 Prospective comparison of genome-wide aCGH platforms for the detection of CNVs in MR (GSE27367) [Oligo Array] WiCell HG18 WG CGH 385K v2 (GPL7717) University of British Columbia 2011-02-16 Homo sapiens
Homo sapiens		 23,446,920
(390,782 x 60) 		60 by_platform
by_series
13 Copy number variation in the genomes of Caenorhabditis elegans end-to-end fusion strains (GSE26691) [Oligo Array] UBC/Moerman C. elegans WS170 380K (GPL11527) University of British Columbia 2011-01-18 Caenorhabditis elegans
Caenorhabditis elegans		 17,871,139
(380,237 x 47) 		47 by_platform
by_series
14 Expression quantitative trait loci (eQTL) analysis of Brassica rapa under varying soil phosphorus (P) supplies (GSE27052) [Oligo Array] Agilent Custom Brassica 60-mer two-color microarray (GPL8513) University of Western Australia 2011-02-03 Brassica rapa
Brassica rapa		 17,862,240
(105,072 x 170) 		170 by_platform
by_series
15 CNVs in spermatogenic failure (GSE27965) [Oligo Array] Agilent-021850 SurePrint G3 Human CGH Microarray 2x400K (GPL9777) Institute of Human Genetics 2011-03-15 Homo sapiens
Homo sapiens		 16,391,232
(420,288 x 39) 		39 by_platform
by_series
16 Plasmodium falciparum CNV-SNP chip optimization (GSE28287) [Oligo Array] NimbleGen Pfalciparum 720K 1.0 (GPL13355) University of Notre Dame 2011-03-31 Plasmodium falciparum
Plasmodium falciparum		 15,655,332
(355,803 x 44) 		44 by_platform
by_series
17 Prospective comparison of genome-wide aCGH platforms for the detection of CNVs in MR (Agilent 244K) (GSE27229) [Oligo Array] Agilent-014693 Human Genome CGH Microarray 244A (Feature number version) (GPL4091) University of British Columbia 2011-02-10 Homo sapiens
Homo sapiens		 14,610,240
(243,504 x 60) 		60 by_platform
by_series
18 Prospective comparison of genome-wide aCGH platforms for the detection of CNVs in MR (GSE27367) [Oligo Array] Agilent-014693 Human Genome CGH Microarray 244A (Feature number version) (GPL4091) University of British Columbia 2011-02-16 Homo sapiens
Homo sapiens		 14,610,240
(243,504 x 60) 		60 by_platform
by_series
19 A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants (2X244K) (GSE28187) [Oligo Array] Agilent Technologies Human Genome CNV microarray set G4423B (AMADID 018898) (GPL6945) The Hospital for Sick Children 2011-03-25 Homo sapiens
Homo sapiens		 13,149,216
(243,504 x 54) 		54 by_platform
by_series
20 Comparative oncogenomics identifies breast tumors enriched in functional tumor initiating cells (GSE27101) [Oligo Array] Agilent-014695 Mouse Genome CGH Microarray 244A (G4415A) (Feature Number version) (GPL4092) University of North Carolina at Chapel Hill 2011-02-07 Mus musculus
Mus musculus		 10,714,176
(243,504 x 44) 		44 by_platform
by_series
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