Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(205)		   Primates
(0)		   Rodents
(86)		   Mammals
(8)		   Vertebrates
(9)		   Invertebrates
(17)		   Plants
(67)		   Bacteria
(37)		   Viruses
(0)		   Phages
(0)		   Unclassified
(4)		   All
(433)		  
  SAGE NlaIII
(2)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(2)		   GeneChip
(106)		   Tiling Array
(12)		   cDNA Array
(36)		   Oligo Array
(161)		   Bead Array
(80)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(34)		   Other
(0)		   All
(433)		  
1   |   2   |   3   |   4   |   5      »      [9]
Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 The global gene expression pattern by KDX1 over-expression (GSE45692) [Oligo Array] Saccharomyces cerevisiae 3x20K Microarrays (GPL16942) Korea university 2013-04-01 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 5,881
(5,881 x 1) 		1 by_platform
by_series
2 Vibrio vulnificus: Wild type vs. iscR mutant (V. vulnificus iron-sulfur cluster regulator) (GSE44679) [Oligo Array] Vibrio vulnificus whole genome TwinChip (GPL16723) Seoul National University 2013-02-26 Vibrio vulnificus
Vibrio vulnificus		 21,012
(3,502 x 6) 		6 by_platform
by_series
3 H3N2 canine influenza virus causes severe clinical signs in dogs with induction of genes related to inflammation and apoptosis (GSE44545) [Oligo Array] Agilent-021193 Canine (V2) Gene Expression Microarray (ProbeName version) (GPL15379) Chungnam national university 2013-02-21 Canis lupus familiaris
Canis lupus familiaris		 87,326
(43,663 x 2) 		2 by_platform
by_series
4 DNA profiling of human normal colon tissues (GSE44300) [Oligo Array] Agilent-014950 Human Genome CGH Microarray 4x44K (Probe Name version) (GPL8841) Cancer Metastasis Research Center 2013-02-13 Homo sapiens
Homo sapiens		 1,775,587
(43,307 x 41) 		41 by_platform
by_series
5 Biphasic functional regulation in hippocampus of rat with chronic cerebral hypoperfusion induced by permanent occlusion of bilateral common carotid artery (GSE44289) [Oligo Array] Agilent-028282 Whole Rat Genome Microarray 4x44K v3 (GPL14745) KIOM 2013-02-13 Rattus norvegicus
Rattus norvegicus		 271,320
(45,220 x 6) 		6 by_platform
by_series
6 The Severe Pathogenicity of Infected Ferrets Depleted of Alveolar Macrophages with 2009 Pandemic H1N1 Influenza Virus (GSE43813) [Oligo Array] Agilent-021193 Canine (V2) Gene Expression Microarray (ProbeName version) (GPL15379) Chungnam national university 2013-01-28 Mustela putorius
Mustela putorius		 130,989
(43,663 x 3) 		2 1 by_platform
by_series
7 Expression of M-CSF from cryopreserved teeth-derived human periodontal ligament cells with different freezing protocols (GSE43611) [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) Kyung Hee University 2013-01-18 Homo sapiens
Homo sapiens		 135,660
(45,220 x 3) 		3 by_platform
by_series
8 Global transcriptome analysis of eukaryotic genes affected by Gromwell extract (GSE43370) [Oligo Array] Duke Cryptococcus neoformans serotype D (JEC21) 8K (GPL8638) Yonsei University 2013-01-09 Cryptococcus neoformans var. grubii H99
Cryptococcus neoformans var. grubii H99		 101,376
(8,448 x 12) 		12 by_platform
by_series
9 Variant acute promyelocytic leukemia (APL) bone marrow aCGH (GSE42984) [Oligo Array] Agilent-022060 SurePrint G3 Human CGH Microarray 4x180K (Feature Number version) (GPL10123) Asan Medical Center 2012-12-18 Homo sapiens
Homo sapiens		 180,880
(180,880 x 1) 		1 by_platform
by_series
10 Patient specific orthotopic glioblastoma xenograft models recapitulate the histopathology and biology of human glioblastomas in situ (GSE42670) [Oligo Array] Agilent-014693 Human Genome CGH Microarray 244A (Feature number version) (GPL4091) Samsung Medical Center 2012-12-02 Homo sapiens
Homo sapiens		 487,008
(243,504 x 2) 		1 1 by_platform
by_series
11 Patient specific orthotopic glioblastoma xenograft models recapitulate the histopathology and biology of human glioblastomas in situ (CGH) (GSE42577) [Oligo Array] Agilent-014693 Human Genome CGH Microarray 244A (Feature number version) (GPL4091) Samsung Medical Center 2012-11-28 Homo sapiens
Homo sapiens		 487,008
(243,504 x 2) 		1 1 by_platform
by_series
12 Alkaline Phosphatase ALPPL2 is a novel pancreatic carcinoma-associated protein (GSE42429) [Oligo Array] NimbleGen Homo sapiens HG18 090828 opt expr HX12 (12x135k) (GPL10191) Sungkyunkwan University 2012-11-20 Homo sapiens
Homo sapiens		 405,297
(45,033 x 9) 		9 by_platform
by_series
13 Expression analysis of human pancreatic cancer cell lines (Capan-1, Panc-1, Panc-1+ve and Panc-1-ve) and pancreatic ductal cell line (HPDE) (GSE42428) [Oligo Array] NimbleGen Homo sapiens HG18 090828 opt expr HX12 (12x135k) (GPL10191) Sungkyunkwan University 2012-11-20 Homo sapiens
Homo sapiens		 225,165
(45,033 x 5) 		5 by_platform
by_series
14 Expression analysis of RNAi mediated ALPPL2 knockdown in ALPPL2 expressing Panc-1 cells (Panc-1+ve) (GSE42427) [Oligo Array] NimbleGen Homo sapiens HG18 090828 opt expr HX12 (12x135k) (GPL10191) Sungkyunkwan University 2012-11-20 Homo sapiens
Homo sapiens		 180,132
(45,033 x 4) 		4 by_platform
by_series
15 Arabidopsis thaliana vegetative part: Col-0 vs. shr scl23 scr triple mutant (GSE41478) [Oligo Array] Agilent-021169 Arabidopsis 4 Oligo Microarray (V4) (Probe Name version) (GPL12621) KonKuk University 2012-10-10 Arabidopsis thaliana
Arabidopsis thaliana		 174,652
(43,663 x 4) 		4 by_platform
by_series
16 human placenta-derived cell line (JEG-3): Control vs. valproic acid(VPA)-treated (GSE41441) [Oligo Array] Agilent-012391 Whole Human Genome Oligo Microarray G4112A (Feature Number version) (GPL1708) Eulji University 2012-10-10 Homo sapiens
Homo sapiens		 132,870
(44,290 x 3) 		3 by_platform
by_series
17 Pseudomonas putida KT2440: Control vs. indole 1mM treated (GSE41254) [Oligo Array] Pseudomonas putida KT2440 Mycroarrays (GPL10799) Korea university 2012-10-01 Pseudomonas putida KT2440
Pseudomonas putida KT2440		 10,618
(5,309 x 2) 		2 by_platform
by_series
18 Gene alteration in A549 cells by disinfectant PHMG (GSE41156) [Oligo Array] Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Feature Number version) (GPL10332) College of Medicine, Soonchunhyang University 2012-09-26 Homo sapiens
Homo sapiens		 45,220
(45,220 x 1) 		1 by_platform
by_series
19 Pleiotropic roles of Msi1-like protein, Msl1, in growth, differentiation, stress response, and virulence of Cryptococcus neoformans (GSE40303) [Oligo Array] Duke Cryptococcus neoformans serotype D (JEC21) 8K (GPL8638) Yonsei University 2012-08-22 Cryptococcus neoformans var. grubii H99,Cryptococcus neoformans var. grubii
Cryptococcus neoformans var. grubii H99,Cryptococcus neoformans var. grubii		 50,688
(8,448 x 6) 		6 by_platform
by_series
20 Transcriptomic analysis of differential genetic expression under CosR-knockdown condition compared with wild-type (GSE40201) [Oligo Array] Campylobacter jejuni subsp. jejuni NCTC 11168 15K Microarrays (GPL15955) Seoul National University 2012-08-17 Campylobacter jejuni
Campylobacter jejuni		 13,176
(4,392 x 3) 		3 by_platform
by_series
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