Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(228)
  SAGE RsaI
(1)
  SAGE Sau3A
(16)
  MPSS
(67)
  GeneChip
(19,582)
  Tiling Array
(4,015)
  cDNA Array
(5,993)
  Oligo Array
(14,254)
  Bead Array
(4,043)
  Protein Array
(1)
  Antibody
(43)
  RT-PCR
(338)
  HT-Seq
(7,682)
  Other
(247)
  All
(56,529)
 
1   |   2   |   3   |   4   |   5      »      [713]
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Removing System Noise from Comparative Genomic Hybridization Data by Self-Self Analysis (GSE23682) [Oligo Array] NimbleGen Human 2.1M array [080131_HG18_WG_CGH_v2DCR_HX1] (GPL10815) Cold Spring Harbor Lab 2010-08-18 Homo sapiens
Homo sapiens
2,147,483,647
(2,161,679 x 3,852)
3,852 by_platform
by_series
2 Refinement and discovery of new hotspots of copy number variation associated with autism spectrum disorder (GSE39655) [Oligo Array] Agilent-027478 Homo sapiens 420K HOTSPOT3.1_SG (GPL15849) University of Washington 2012-07-25 Homo sapiens
Homo sapiens
1,808,078,976
(420,288 x 4,302)
197 4,105 by_platform
by_series
3 Detection of de novo and homozygous copy number variants in 99 autism simplex trios (GSE23765) [Oligo Array] Agilent-022689 Custom BCM-Beaudet Human 1M Exon Autism Array (GPL10808) Baylor College of Medicine 2010-08-24 Homo sapiens
Homo sapiens
292,204,800
(974,016 x 300)
300 by_platform
by_series
4 DNA methylation data from non-immortalized lymphocyte samples from participants of the AGES Reykjavik Study (GSE23858) [Oligo Array] NimbleGen Human 2.1M array (GPL9275) Johns Hopkins University 2010-08-27 Homo sapiens
Homo sapiens
242,189,472
(2,162,406 x 112)
112 by_platform
by_series
5 Epigenomic Approaches to explaining Metabolic Memory in the Epidemiology of Diabetes Intervention and Complications (EDIC) Study (GSE47385) [Oligo Array] NimbleGen Human ChIP-CHIP 3 x 720k REFSEQ Promoter Array [090618_HG18_Refseq_Prom_ChIP and 100718_HG18_Refseq_Prom_ChIP] (GPL15802) City of Hope 2013-05-26 Homo sapiens
Homo sapiens
213,985,800
(713,286 x 300)
300 by_platform
by_series
6 Measuring cell-type specific differential methylation in human brain tissue (GSE48610) [Oligo Array] NimbleGen Human 2.0M array [091020_HG19_CHARM_HX1] (GPL13611) Johns Hopkins School of Medicine 2013-07-09 Homo sapiens
Homo sapiens
195,777,127
(2,151,397 x 91)
91 by_platform
by_series
7 Population genetic properties of differentiated human copy number polymorphisms (GSE26450) [Oligo Array] Agilent Eichler Human CNP 180K v3.0 (GPL11387) Univerisity of Washington 2011-01-05 Homo sapiens
Homo sapiens
171,293,360
(180,880 x 947)
947 by_platform
by_series
8 miniChIP-chip of murine hematopoietic stem cells and progeny with H3K4me3, H3K79me2, H3K9/14ac, H3K27me3, H3K9me3, PolII (GSE18734) [Oligo Array] NimbleGen Mouse MM8 Deluxe Promoter Array (GPL9485) Lund University 2009-10-26 Mus musculus
Mus musculus
151,762,784
(2,137,504 x 71)
17 54 by_platform
by_series
9 Epigenetic chromatin states uniquely define the developmental plasticity of murine hematopoietic stem cells (GSE18737) [Oligo Array] NimbleGen Mouse MM8 Deluxe Promoter Array (GPL9485) Lund University 2009-10-26 Mus musculus
Mus musculus
151,762,784
(2,137,504 x 71)
17 54 by_platform
by_series
10 DNA methylation data from mouse iPS cells, ES cells, and ntES cells (GSE22851) [Oligo Array] NimbleGen Mouse 2.1M array [Feinberg_MM8_Me_HX1] (GPL10680) Johns Hopkins University School of Medicine 2010-07-09 Mus musculus
Mus musculus
147,186,816
(2,164,512 x 68)
68 by_platform
by_series
11 Dynamic Chromatin Modification Sustains Epithelial-Mesenchymal Transition following Inducible Expression of Snail-1 (ChIP-chip) (GSE52591) [Oligo Array] NimbleGen Human 2.1M Deluxe Promoter Array [080814_HG18_Deluxe_Promoter_HX1] (GPL17845) Massachusetts General Hospital 2013-11-20 Homo sapiens
Homo sapiens
116,897,550
(2,125,410 x 55)
55 by_platform
by_series
12 Dynamic Chromatin Modification Sustains Epithelial-Mesenchymal Transition following Inducible Expression of Snail-1 (GSE52593) [Oligo Array] NimbleGen Human 2.1M Deluxe Promoter Array [080814_HG18_Deluxe_Promoter_HX1] (GPL17845) Massachusetts General Hospital 2013-11-20 Homo sapiens
Homo sapiens
116,897,550
(2,125,410 x 55)
55 by_platform
by_series
13 Copy number variation in the porcine genome (GSE19047) [Oligo Array] NimbleGen agrsci porcine 2.1M v1 (GPL9664) Aarhus University, Faculty of Agricultural Sciences 2009-11-16 Sus scrofa
Sus scrofa domestica
102,881,808
(2,143,371 x 48)
48 by_platform
by_series
14 An MLL/COMPASS subunit functions in the C. elegans dosage compensation complex to target X chromosomes for transcriptional regulation of gene expression (GSE25834) [Oligo Array] NimbleGen 071121_Celegans180_ChIP03_design_ID_6737 (GPL8134) HHMI/UCB 2010-12-03 Caenorhabditis elegans
Caenorhabditis elegans
95,589,211
(2,033,813 x 47)
45 2 by_platform
by_series
15 Examination of DPY-30, DPY-27, SDC-3, DPY-26, MIX-1, SMC-4, ASH-2, RNA Polymerase II binding in wild type and DCC mutant embryos (GSE25833) [Oligo Array] NimbleGen 071121_Celegans180_ChIP03_design_ID_6737 (GPL8134) HHMI/UCB 2010-12-03 Caenorhabditis elegans
Caenorhabditis elegans
89,487,772
(2,033,813 x 44)
44 by_platform
by_series
16 Agilent 244A aCGH array for breast, lung, melanoma, ovary, and prostate (GSE20393) [Oligo Array] Agilent-014693 Human Genome CGH Microarray 244A (Probe name version) (GPL9128) Genentech, Inc. 2010-02-17 Homo sapiens
Homo sapiens
88,171,605
(236,385 x 373)
51 109 52 161 by_platform
by_series
17 Diverse somatic mutation patterns and pathway alterations in human cancers (GSE23768) [Oligo Array] Agilent-014693 Human Genome CGH Microarray 244A (Probe name version) (GPL9128) Genentech, Inc. 2010-08-24 Homo sapiens
Homo sapiens
88,171,605
(236,385 x 373)
51 109 52 161 by_platform
by_series
18 Population genetic properties of differentiated human copy number polymorphisms (GSE26450) [Oligo Array] Agilent Eichler Human CNP 180K v2.1 (GPL11386) Univerisity of Washington 2011-01-05 Homo sapiens
Homo sapiens
88,088,560
(180,880 x 487)
487 by_platform
by_series
19 High Frequency of CNV Mutations in Combined Schizophrenia and Epilepsy (GSE23703) [Oligo Array] Agilent-023456 Custom BCM-Beaudet Human 180K V8cleaned aCGH Array (GPL10806) Baylor College of Medicine 2010-08-18 Homo sapiens
Homo sapiens
87,365,040
(180,880 x 483)
483 by_platform
by_series
20 Expression profile of liver, omental adipose, and subcutaneous adipose samples from subjects at the time of Roux en Y gastric bypass surgery. (GSE24335) [Oligo Array] Rosetta/Merck Human 44k 1.1 microarray (GPL4372) Merck and Co. Inc. 2010-09-23 Homo sapiens
Homo sapiens
86,464,400
(39,302 x 2,200)
1,549 651 by_platform
by_series
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