Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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RSS
Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(74)
  Primates
(0)
  Rodents
(36)
  Mammals
(0)
  Vertebrates
(0)
  Invertebrates
(38)
  Plants
(54)
  Bacteria
(33)
  Viruses
(0)
  Phages
(0)
  Unclassified
(0)
  All
(258)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(0)
  Tiling Array
(29)
  cDNA Array
(125)
  Oligo Array
(78)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(1)
  Other
(0)
  All
(258)
 
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Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL3644 WTSI Xenopus tropicalis 2.5K array v2.1.1 2,471 Wellcome Trust Sanger Institute 2006-04-10 WTSI Microarray facility Xenopus (Silurana) tropicalis
Xenopus tropicalis
Oligo Array spotted oligonucleotide, WTSI Xenopus tropicalis 2.5K array v2.1.1, GE Healthcare Codelink
2 GPL3673 UNM Human Operon 18K version 3 slide 1 array format 18,432 University of New Mexico, School of Medicine 2006-04-14 University of New Mexico, School of Medicine EBL Homo sapiens
Homo sapiens
Oligo Array spotted oligonucleotide, UNM Human Operon 18K version 3 slide 1 array format,
3 GPL3800 population genetic approach to host patheogen response 18,432 University of New Mexico, School of Medicine 2006-05-24 University of New Mexico Experimental Biology Laboratory Homo sapiens
Homo sapiens
Oligo Array spotted oligonucleotide, population genetic approach to host patheogen response,
4 GPL3924 Mouse 23K oligo microarray_CD133-Prominin Study 21,738 Texas A&M HSC 2006-06-26 University of Colorado, Gene Expression Core Laboratory, Dr Brian Soriano Mus musculus
Mus musculus
Oligo Array spotted oligonucleotide, Mouse 23K oligo microarray_CD133-Prominin Study, Custom-printed 23,000 feature mouse-oligonucleotide arrays, (provided by Dr. Brian Soriano, University of Colorado, Department of Pharmacology, Gene Expression Core Laboratory)
5 GPL3876 UCSF Mus musculus 39K 15Mm MEEBO Oligo Array 38,976 University of California, San Francisco 2006-06-14 UCSF Shared Microarray Facility Mus musculus
Mus musculus
Oligo Array spotted oligonucleotide, UCSF Mus musculus 39K 15Mm MEEBO Oligo Array, Arrays were printed on aminosilane coated slides (Schott Nexterion, Elmford, NY)
6 GPL3732 UCSF 9Hs Human 23K v.2 Oligo Array 23,040 University of California, San Francisco 2006-05-05 UCSF Shared Microarray Facility Homo sapiens
Homo sapiens
Oligo Array spotted oligonucleotide, UCSF 9Hs Human 23K v.2 Oligo Array, Arrays were printed on aldehyde coated slides. Please see the Erie Scientific website for more information.
7 GPL3651 Vibrio cholerae Spotted oligonucleotides 3,997 Tufts University/HHMI 2006-04-12 Tufts New England Medical Center Expression Array Core Vibrio cholerae O1 biovar El Tor str. N16961
Vibrio cholerae O1 biovar El Tor str. N16961
Oligo Array spotted oligonucleotide, Vibrio cholerae Spotted oligonucleotides,
8 GPL3918 MERH03-S1-0002 (Rhodococcus sp. RHA1 22K) 22,080 University of British Columbia 2006-06-23 The Microarray Facility of the Prostate Centre at Vancouver General Hospital Rhodococcus jostii RHA1
Rhodococcus jostii RHA1
Oligo Array spotted oligonucleotide, MERH03-S1-0002 (Rhodococcus sp. RHA1 22K),
9 GPL3702 Galbraith Laboratory Operon Long Oligonucleotide Microarray version 3.0 (ATv304.03.Z) 31,200 University of Arizona 2006-04-25 The Galbraith Laboratory, University of Arizona Arabidopsis thaliana
Arabidopsis thaliana
Oligo Array spotted oligonucleotide, Galbraith Laboratory Operon Long Oligonucleotide Microarray version 3.0 (ATv304.03.Z),
10 GPL3638 The miniarray (Arabidopsis Pathoarray) 464_001 576 National Institute for Basic Biology 2006-04-06 Stanford Functional Genomics Facility Arabidopsis thaliana
Arabidopsis thaliana
Oligo Array spotted oligonucleotide, The miniarray (Arabidopsis Pathoarray) 464_001, This set includes 576 oligonucleotides, 50 to 70-mers, consisting of 464 Arabidopsis pathogen-responsive and 107 Arabidopsis normalization genes and 5 arbitrary spiked-controls. Each feature contains 0.9mg/ml of oligonucleotide above and 0.25mg/ml of calibration oligonucleotide.
11 GPL3964 SAMF Human 14k Part2 14,592 University of Calgary 2006-06-30 Southern Alberta Microarray Facility Homo sapiens
Homo sapiens
Oligo Array spotted oligonucleotide, SAMF Human 14k Part2, The array contains 32 subgrids arranged in 4 columns x 8 rows. Each subgrid has 19 rows and 24 columns. Grid to grid distance is 4500 um. Average spot diameter is 100um. Spot to spot distance is 180 um.
12 GPL3965 SAMF Mouse 7k 14,592 University of Calgary 2006-06-30 Southern Alberta Microarray Facility Mus musculus
Mus musculus
Oligo Array spotted oligonucleotide, SAMF Mouse 7k, The array contains 32 subgrids arranged in 4 columns x 8 rows. Each subgrid has 19 rows and 24 columns. Grid to grid distance is 4500 um. Average spot diameter is 100um. Spot to spot distance is 180 um.
13 GPL3963 SAMF Human 14k Part1 13,824 University of Calgary 2006-06-30 Southern Alberta Microarray Facility Homo sapiens
Homo sapiens
Oligo Array spotted oligonucleotide, SAMF Human 14k Part1, The array contains 32 subgrids arranged in 4 columns x 8 rows. Each subgrid has 18 rows and 24 columns. Grid to grid distance is 4500 um. Average spot diameter is 100um. Spot to spot distance is 180 um.
14 GPL3772 Transcriptional Profiling of Borrelia burgdorferi containing a unique bosR allele 1,712 Texas A&M University HSC 2006-05-16 Sigma-Genosys Borrelia burgdorferi
Borrelia burgdorferi
Oligo Array spotted oligonucleotide, Transcriptional Profiling of Borrelia burgdorferi containing a unique bosR allele ,
15 GPL3677 Rosetta/Merck Mouse 44k 1.0 microarray 39,556 Rosetta Inpharmatics / Merck Pharmaceuticals 2006-04-18 Rosetta Inpharmatics / Merck Pharmaceuticals Mus musculus
Mus musculus
Oligo Array in situ oligonucleotide, Rosetta/Merck Mouse 44k 1.0 microarray, Oligonucleotide array on glass. Contains 60-mer probes (60-mer).
16 GPL3631 Rosetta/Merck Rat 50k v2.1 Array 1 microarray 23,653 Rosetta Inpharmatics / Merck Pharmaceuticals 2006-04-05 Rosetta Inpharmatics / Merck Pharmaceuticals Rattus norvegicus
Rattus norvegicus
Oligo Array in situ oligonucleotide, Rosetta/Merck Rat 50k v2.1 Array 1 microarray, Oligonucleotide array on glass. Contains 60-mer probes (60-mer).
17 GPL3666 RIKILT mouse oligo 10K array 10,296 RIKILT / Maastricht University 2006-04-13 Rikilt-Institute of Food Safety Mus musculus
Mus musculus
Oligo Array spotted oligonucleotide, RIKILT mouse oligo 10K array,
18 GPL3754 Riken Mouse 4K miRNA array M8.0 3,968 RIKEN 2006-05-12 RIKEN Center for Developmental Biology Mus musculus
Mus musculus
Oligo Array spotted oligonucleotide, Riken Mouse 4K miRNA array M8.0,
19 GPL3699 RAKEv2 4,608 University of Pennsylvania 2006-04-24 Penn Microarray Facility Arabidopsis thaliana,Homo sapiens,Mus musculus,Rattus norvegicus
Arabidopsis thaliana,Homo sapiens,Mus musculus,Rattus norvegicus
Oligo Array spotted oligonucleotide, RAKEv2, Printed glass slide microarray for RNA-primed Array-based Klenow Enzyme assay for detection of microRNAs
20 GPL3801 Operon Rat Oligonucleotide Array 18,144 University of Arizona 2006-05-24 Operon Biotechnologies Rattus norvegicus
Rattus norvegicus
Oligo Array spotted oligonucleotide, Operon Rat Oligonucleotide Array,
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